Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788871
Identifier: 91788871
GI number: 91788871
Start: 3172336
End: 3173328
Strand: Reverse
Name: 91788871
Synonym: Bpro_3011
Alternate gene names: NA
Gene position: 3173328-3172336 (Counterclockwise)
Preceding gene: 91788873
Following gene: 91788870
Centisome position: 61.02
GC content: 65.56
Gene sequence:
>993_bases ATGCCCGCTTCATCACGCCGTTCGTTTGTTGCTCGCGCCGCCGGCGCCATCGCCTGCCTGACTTTGGTGGCGGCGGCCCT GCCCGTCGCAGCGCAGGGCTATCCCACGCGGCCTGTCACGCTGATCGTGCCGTGGGGGGCGGGCGGCGGTACCGATGCGA CGGCCCGCATCGTGGGCAGCCTGCTGGAGAAGGAAATTGGCCAGCCCGTCACGGTGGTCAACCGCACGGGCGGCAGCGGT GTGGTTGGCCATTCCGCCATTGCCTCGGCGCCGCCTGACGGCTACACGATCGGCCTGGCCACCGTGGAGATCGGCATGAT GCACTGGCAGGGCCTGACCGAGCTGACAGGCGCTTCGTACACCCCTATCGGTCTGGTCAATGCTGACCCGGCGGGTATTC AGGTCAGGGCCGATGCGCCTTACAAGACCGTCAATGAACTGCTGGCGGCGATCAAGGCCAATCCCGGCAAGCTCAAGGCT TCGGGAACCGGGCAGGGCGGCATCTGGCACCTGGCCATTGCCGGCCTGCTCCGCGACCAGAAAATCGACCCGGCCTCCGT GCCCTGGGTTCCCAGCAATGGCGCTGCGCCTGGCTTGCAGGACATGATTGCCGGCGGCGTCGACATTGCCCCGGTCTCCT TGCCGGAAGCACGCTCGCTGATTGACGCCGGCAAGGTCAAGAGCCTGGCGATCATGAATGACAAGCCCGCAGCCCTGTAC CCCAACGTGGCCACGCTCAAGGCTGCCATCGGCAGCGACTGGACCATGGCAGCGTGGCGAGGCATTGTGGCACCCAAGGG TATTCCTGCCGAGGTGCGCGACAAGCTGAGCGCCGCGATCAAAAAAATTGCGGCGAGCAAGGAATACAACGACTTCATGT CCAGCCGCGGCTTTGGCGTGGTGTACGCCGGCCCCGACGAATTCGGCAAATTCATGGCGAAGTCCGATGCCGAACTCGGG GCGACCATGAAGGCGGTCGGCATCGCCAAGTAG
Upstream 100 bases:
>100_bases CCCGAAGCCGCCTCAGGGATGCCTTGTCGGAACACGGCGCGCTGCAAATTGTTGAGGCATTCCCGCAAGCCATTCACTGA CAGCCCACAAGGAGACATCC
Downstream 100 bases:
>100_bases CGCCTGTCCCGGCGACCCGCCAAAGAACCCCGCAGGGCCGGGGACTCCTGCCCGGCCAATTCGTGAAAGTCTCCGCATGA AACTCAATGACGCGATCTTC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MPASSRRSFVARAAGAIACLTLVAAALPVAAQGYPTRPVTLIVPWGAGGGTDATARIVGSLLEKEIGQPVTVVNRTGGSG VVGHSAIASAPPDGYTIGLATVEIGMMHWQGLTELTGASYTPIGLVNADPAGIQVRADAPYKTVNELLAAIKANPGKLKA SGTGQGGIWHLAIAGLLRDQKIDPASVPWVPSNGAAPGLQDMIAGGVDIAPVSLPEARSLIDAGKVKSLAIMNDKPAALY PNVATLKAAIGSDWTMAAWRGIVAPKGIPAEVRDKLSAAIKKIAASKEYNDFMSSRGFGVVYAGPDEFGKFMAKSDAELG ATMKAVGIAK
Sequences:
>Translated_330_residues MPASSRRSFVARAAGAIACLTLVAAALPVAAQGYPTRPVTLIVPWGAGGGTDATARIVGSLLEKEIGQPVTVVNRTGGSG VVGHSAIASAPPDGYTIGLATVEIGMMHWQGLTELTGASYTPIGLVNADPAGIQVRADAPYKTVNELLAAIKANPGKLKA SGTGQGGIWHLAIAGLLRDQKIDPASVPWVPSNGAAPGLQDMIAGGVDIAPVSLPEARSLIDAGKVKSLAIMNDKPAALY PNVATLKAAIGSDWTMAAWRGIVAPKGIPAEVRDKLSAAIKKIAASKEYNDFMSSRGFGVVYAGPDEFGKFMAKSDAELG ATMKAVGIAK >Mature_329_residues PASSRRSFVARAAGAIACLTLVAAALPVAAQGYPTRPVTLIVPWGAGGGTDATARIVGSLLEKEIGQPVTVVNRTGGSGV VGHSAIASAPPDGYTIGLATVEIGMMHWQGLTELTGASYTPIGLVNADPAGIQVRADAPYKTVNELLAAIKANPGKLKAS GTGQGGIWHLAIAGLLRDQKIDPASVPWVPSNGAAPGLQDMIAGGVDIAPVSLPEARSLIDAGKVKSLAIMNDKPAALYP NVATLKAAIGSDWTMAAWRGIVAPKGIPAEVRDKLSAAIKKIAASKEYNDFMSSRGFGVVYAGPDEFGKFMAKSDAELGA TMKAVGIAK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33641; Mature: 33510
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASSRRSFVARAAGAIACLTLVAAALPVAAQGYPTRPVTLIVPWGAGGGTDATARIVGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHH LLEKEIGQPVTVVNRTGGSGVVGHSAIASAPPDGYTIGLATVEIGMMHWQGLTELTGASY HHHHHHCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEHHEEEHHHHHCCHHHHCCCCC TPIGLVNADPAGIQVRADAPYKTVNELLAAIKANPGKLKASGTGQGGIWHLAIAGLLRDQ CCEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCC KIDPASVPWVPSNGAAPGLQDMIAGGVDIAPVSLPEARSLIDAGKVKSLAIMNDKPAALY CCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCHHHHHHHHHCCCCEEEEECCCCCEEC PNVATLKAAIGSDWTMAAWRGIVAPKGIPAEVRDKLSAAIKKIAASKEYNDFMSSRGFGV CCHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VYAGPDEFGKFMAKSDAELGATMKAVGIAK EEECHHHHHHHHHCCCHHHCCHHHHHCCCC >Mature Secondary Structure PASSRRSFVARAAGAIACLTLVAAALPVAAQGYPTRPVTLIVPWGAGGGTDATARIVGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHH LLEKEIGQPVTVVNRTGGSGVVGHSAIASAPPDGYTIGLATVEIGMMHWQGLTELTGASY HHHHHHCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEEEHHEEEHHHHHCCHHHHCCCCC TPIGLVNADPAGIQVRADAPYKTVNELLAAIKANPGKLKASGTGQGGIWHLAIAGLLRDQ CCEEEECCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCC KIDPASVPWVPSNGAAPGLQDMIAGGVDIAPVSLPEARSLIDAGKVKSLAIMNDKPAALY CCCCCCCCCCCCCCCCCCHHHHHHCCCCEECCCCHHHHHHHHHCCCCEEEEECCCCCEEC PNVATLKAAIGSDWTMAAWRGIVAPKGIPAEVRDKLSAAIKKIAASKEYNDFMSSRGFGV CCHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VYAGPDEFGKFMAKSDAELGATMKAVGIAK EEECHHHHHHHHHCCCHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]