Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788869
Identifier: 91788869
GI number: 91788869
Start: 3170253
End: 3171752
Strand: Reverse
Name: 91788869
Synonym: Bpro_3009
Alternate gene names: NA
Gene position: 3171752-3170253 (Counterclockwise)
Preceding gene: 91788870
Following gene: 91788868
Centisome position: 60.99
GC content: 60.0
Gene sequence:
>1500_bases ATGTGGAATGCAGTGGCACAGGCGTTTTTGATGGTGTTCGAGCCCTACACCCTTTTTGTGATGGTGCTCGCCGCGTTTTA CGGCTTGTTCGTAGGGGCGGTGCCGGGGCTTACCGCCACCATGGCCACGGCACTGCTGGTGCCTGTGACCTTTTTCATGG CCCCGGTGCCGGCCATAGCCGCCATCGTGACGGCCACCGCGATGGCGATTTTTTCGGGCGACATCCCCGGCTGCCTCCTG CGCATACCGGGCACACCCGCCTCTGCCGCATACACCGATGAGGCCTTTGCACTAACCCGCAAGGGCCAGGCCGAGGTGGC GCTCGGGGCCGGCCTGGTATTTTCGGCCGTGGGCGGACTGTTCGGCACGATTGTGCTGATTGTTGCTGCGCCGGCGCTGG CCGAATTCGCCATCAGGTTCAGCTCGTTCGAATATTTCTGGCTGGTGTTGCTGGGGCTGACCTGCGCCGTGTTCATCACA TCTGATAGACCTCTCAAGGGGTTGATCACCCTGTTCCTTGGTCTGCTGGTCGCCTGTGTCGGCCTGAACAACCCGGCCGG CTTTCCGCGCTTCACCTTTGGCAACGCTGAGATGACGGGCGGCATCGGCATGATCGCGATGATGATCGGCATGTTTGCCA TTTCCGAGATCATTCGCTATGTTGTGGACACCAGCCCGCCGGCCGAACTGGTGGTGGAGCAGGTGGGCAATGTGCTCAAG GGGCAATGGAAGCTGGCCAAAAAATACCCTGTGCAGATCCTGCGGGGCAGCGTGCTGGGTACCGCCGTGGGGGCCTTGCC AGGTGCCGGAGCCGACATTGCGGCCTGGATGTCGTACGCCATGAGCAAGAAGTTTTCCAAAGAGCCCGAAAAATTCGGCA CCGGCCATGTCGAAGGCATTGTCGAATCGGGCTCTGCCAACAACAGCGCGCTGGCCGGCGCGTGGATTCCCGCGCTGGTG TTCGGCATTCCGGGCGACTCGATTACCGCGATTGTCATTGGCGTGCTCTACATGAAGAACATGAACCCGGGGCCGACGCT CTTCACCACCAACCCGCAAAACATCTATGCGATTTTCCTGATCTTCATCCTGGCCAACATCATCATGGTTCCGCTGGGCA TCCTGTGCATCAAGGCCTCCAAAAAGATACTCAAGGTGCCGCGCAACATTCTGATGCCGCTGATCCTGCTGTTCTGCATG GTGGGCACTTTTGCCATCAACAACTCCATGTTCGAAATCGGCGTGATGCTGGTGGCCGGGCTGATTGCGTACCTGCTGGA GGAAAACCACTTTCCGATCGCTCCCGCGATTTTGGGTGTGGTGCTTGGAGGCATGCTGGAGGAAAATTTCATCACCTCGA TGATCAAGTCGGATGGCAACCTGATGGCCTTTGTGGGTCGGCCCATCGCCGCCACGCTTGCCGTGCTGACCGTGCTGGTG TGGACCATGCCGCTGGTGCTGGGCTGGCTGCGCAGGCCAAGGGCAGTCTACGCCGCCTGA
Upstream 100 bases:
>100_bases CTTTGCGTTTTACAAACTGCTTCGGGTGCCGCTGCCGTGGGGCCTGCTGGTCAACCATGCCTGGTAAACGGCTGAACAAC ACACACGGGAGGTGATGCAT
Downstream 100 bases:
>100_bases TGGATCACGTGCCAAGGCGGGCGTGGCCGCGCCGGCCTGTGCCGGCGCAGTCCCGGGAATCCTGCATGACGGTTGCGGGA ACAACCGGGCCTTCGGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MWNAVAQAFLMVFEPYTLFVMVLAAFYGLFVGAVPGLTATMATALLVPVTFFMAPVPAIAAIVTATAMAIFSGDIPGCLL RIPGTPASAAYTDEAFALTRKGQAEVALGAGLVFSAVGGLFGTIVLIVAAPALAEFAIRFSSFEYFWLVLLGLTCAVFIT SDRPLKGLITLFLGLLVACVGLNNPAGFPRFTFGNAEMTGGIGMIAMMIGMFAISEIIRYVVDTSPPAELVVEQVGNVLK GQWKLAKKYPVQILRGSVLGTAVGALPGAGADIAAWMSYAMSKKFSKEPEKFGTGHVEGIVESGSANNSALAGAWIPALV FGIPGDSITAIVIGVLYMKNMNPGPTLFTTNPQNIYAIFLIFILANIIMVPLGILCIKASKKILKVPRNILMPLILLFCM VGTFAINNSMFEIGVMLVAGLIAYLLEENHFPIAPAILGVVLGGMLEENFITSMIKSDGNLMAFVGRPIAATLAVLTVLV WTMPLVLGWLRRPRAVYAA
Sequences:
>Translated_499_residues MWNAVAQAFLMVFEPYTLFVMVLAAFYGLFVGAVPGLTATMATALLVPVTFFMAPVPAIAAIVTATAMAIFSGDIPGCLL RIPGTPASAAYTDEAFALTRKGQAEVALGAGLVFSAVGGLFGTIVLIVAAPALAEFAIRFSSFEYFWLVLLGLTCAVFIT SDRPLKGLITLFLGLLVACVGLNNPAGFPRFTFGNAEMTGGIGMIAMMIGMFAISEIIRYVVDTSPPAELVVEQVGNVLK GQWKLAKKYPVQILRGSVLGTAVGALPGAGADIAAWMSYAMSKKFSKEPEKFGTGHVEGIVESGSANNSALAGAWIPALV FGIPGDSITAIVIGVLYMKNMNPGPTLFTTNPQNIYAIFLIFILANIIMVPLGILCIKASKKILKVPRNILMPLILLFCM VGTFAINNSMFEIGVMLVAGLIAYLLEENHFPIAPAILGVVLGGMLEENFITSMIKSDGNLMAFVGRPIAATLAVLTVLV WTMPLVLGWLRRPRAVYAA >Mature_499_residues MWNAVAQAFLMVFEPYTLFVMVLAAFYGLFVGAVPGLTATMATALLVPVTFFMAPVPAIAAIVTATAMAIFSGDIPGCLL RIPGTPASAAYTDEAFALTRKGQAEVALGAGLVFSAVGGLFGTIVLIVAAPALAEFAIRFSSFEYFWLVLLGLTCAVFIT SDRPLKGLITLFLGLLVACVGLNNPAGFPRFTFGNAEMTGGIGMIAMMIGMFAISEIIRYVVDTSPPAELVVEQVGNVLK GQWKLAKKYPVQILRGSVLGTAVGALPGAGADIAAWMSYAMSKKFSKEPEKFGTGHVEGIVESGSANNSALAGAWIPALV FGIPGDSITAIVIGVLYMKNMNPGPTLFTTNPQNIYAIFLIFILANIIMVPLGILCIKASKKILKVPRNILMPLILLFCM VGTFAINNSMFEIGVMLVAGLIAYLLEENHFPIAPAILGVVLGGMLEENFITSMIKSDGNLMAFVGRPIAATLAVLTVLV WTMPLVLGWLRRPRAVYAA
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52808; Mature: 52808
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNAVAQAFLMVFEPYTLFVMVLAAFYGLFVGAVPGLTATMATALLVPVTFFMAPVPAIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AIVTATAMAIFSGDIPGCLLRIPGTPASAAYTDEAFALTRKGQAEVALGAGLVFSAVGGL HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH FGTIVLIVAAPALAEFAIRFSSFEYFWLVLLGLTCAVFITSDRPLKGLITLFLGLLVACV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GLNNPAGFPRFTFGNAEMTGGIGMIAMMIGMFAISEIIRYVVDTSPPAELVVEQVGNVLK CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GQWKLAKKYPVQILRGSVLGTAVGALPGAGADIAAWMSYAMSKKFSKEPEKFGTGHVEGI CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHH VESGSANNSALAGAWIPALVFGIPGDSITAIVIGVLYMKNMNPGPTLFTTNPQNIYAIFL HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHH IFILANIIMVPLGILCIKASKKILKVPRNILMPLILLFCMVGTFAINNSMFEIGVMLVAG HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LIAYLLEENHFPIAPAILGVVLGGMLEENFITSMIKSDGNLMAFVGRPIAATLAVLTVLV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH WTMPLVLGWLRRPRAVYAA HHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MWNAVAQAFLMVFEPYTLFVMVLAAFYGLFVGAVPGLTATMATALLVPVTFFMAPVPAIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AIVTATAMAIFSGDIPGCLLRIPGTPASAAYTDEAFALTRKGQAEVALGAGLVFSAVGGL HHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH FGTIVLIVAAPALAEFAIRFSSFEYFWLVLLGLTCAVFITSDRPLKGLITLFLGLLVACV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH GLNNPAGFPRFTFGNAEMTGGIGMIAMMIGMFAISEIIRYVVDTSPPAELVVEQVGNVLK CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GQWKLAKKYPVQILRGSVLGTAVGALPGAGADIAAWMSYAMSKKFSKEPEKFGTGHVEGI CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHH VESGSANNSALAGAWIPALVFGIPGDSITAIVIGVLYMKNMNPGPTLFTTNPQNIYAIFL HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHH IFILANIIMVPLGILCIKASKKILKVPRNILMPLILLFCMVGTFAINNSMFEIGVMLVAG HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LIAYLLEENHFPIAPAILGVVLGGMLEENFITSMIKSDGNLMAFVGRPIAATLAVLTVLV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH WTMPLVLGWLRRPRAVYAA HHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]