Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788859

Identifier: 91788859

GI number: 91788859

Start: 3159136

End: 3160110

Strand: Reverse

Name: 91788859

Synonym: Bpro_2999

Alternate gene names: NA

Gene position: 3160110-3159136 (Counterclockwise)

Preceding gene: 91788860

Following gene: 91788858

Centisome position: 60.77

GC content: 64.62

Gene sequence:

>975_bases
ATGCAAAACCTTCCCGCCTTCATCCGCCGTTCTATGGCGCTCCTGGCCTTGGCCGCAACGGCCGCCTCGGCGCAAAGCTT
TCCCACCAGGCCCATCGAGTGGGTGGTGCCTTACCCCGCCGGTGGCGGATCCGACGTGGTGGCCCGGGCGCTGACAGAAG
CGATGGGCAGCGCGCTGGGGCAACCGATCGTCATCAACAACAAGCCGGGCGCCGCCACCAACATTGGCGCTGACTATGTG
GCCCATGCCAAACCGGACGGCTACACGGTGCTCACCGGCGACACCGCCACGCTGGCCGCGAACCCGGCGCTTTATACCAA
GCTGAGCTACAGCGCCGAAAAAGACCTGGCGCCCATTGGCCTGCTGGCCCGCTTTCCCATGATCCTGGTGGTCAACCCGG
CGATTCCCGTGAAGAACCTGGCCGAATTCACGGCCTGGGCCAAGACCCAGAAGTCCGGGGTCAGCTACGCCACGCCAGGC
GCGGGCAGCCCGCACCACCTGGCCACGGAACTGTTTCGCGGCAAGACCGGATTGAACCTGGTGCATGTTCCTTACCGCGG
TGCGGCGCCGGCGGTGCAGGATGTGACGGGTGGCCAGCTGCCCTTCATGTTTGTCGATACGGCCAGCGGCATGGCTTTCA
TCAATGCGGGGCGCCTGCGTCCCATCGGCATTGCCAGTCCGCACCGCGTGAAGAACTTCGAAGCCATTCCCACGCTGGAC
GAGCAGGGCCTCAAGGGCTTTGAAGCCTATGTGTGGCAAGGTCTGGTGGCACCGGCCGGAACGCCAGCCGACGTGATCGG
TAAACTGAACAAAACGCTGGTCGACGCGCTCAATTCCACGTCGGTGAAGGCGCGTTTCCAGGTTCTGGGGCTGGAGCCCA
CGCCCAGCACGCCGGCCCAGATGGCTACTTATGCCAAGGCCGAACGCGAAAAGTGGGCGCAGGTGATTCGCGCCAGCGGC
ATCAAGCTGGACTGA

Upstream 100 bases:

>100_bases
AGGCACTGGCGCTGATTGCCCAGGCCGAGCGCCTGGCAGGTACCTGATTTTTTCTGCCGCGCCACCGACGGCTACCGATT
CATTTCTGTCTGGAGACAAC

Downstream 100 bases:

>100_bases
ACATGAACAAGCCGGACTGACCATGATCAAGCTCGACAGGACCCTGACTTACCGCCTGCATTTGCTGCACAAGCTGACCG
ACATTGAAAGTCAGCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MQNLPAFIRRSMALLALAATAASAQSFPTRPIEWVVPYPAGGGSDVVARALTEAMGSALGQPIVINNKPGAATNIGADYV
AHAKPDGYTVLTGDTATLAANPALYTKLSYSAEKDLAPIGLLARFPMILVVNPAIPVKNLAEFTAWAKTQKSGVSYATPG
AGSPHHLATELFRGKTGLNLVHVPYRGAAPAVQDVTGGQLPFMFVDTASGMAFINAGRLRPIGIASPHRVKNFEAIPTLD
EQGLKGFEAYVWQGLVAPAGTPADVIGKLNKTLVDALNSTSVKARFQVLGLEPTPSTPAQMATYAKAEREKWAQVIRASG
IKLD

Sequences:

>Translated_324_residues
MQNLPAFIRRSMALLALAATAASAQSFPTRPIEWVVPYPAGGGSDVVARALTEAMGSALGQPIVINNKPGAATNIGADYV
AHAKPDGYTVLTGDTATLAANPALYTKLSYSAEKDLAPIGLLARFPMILVVNPAIPVKNLAEFTAWAKTQKSGVSYATPG
AGSPHHLATELFRGKTGLNLVHVPYRGAAPAVQDVTGGQLPFMFVDTASGMAFINAGRLRPIGIASPHRVKNFEAIPTLD
EQGLKGFEAYVWQGLVAPAGTPADVIGKLNKTLVDALNSTSVKARFQVLGLEPTPSTPAQMATYAKAEREKWAQVIRASG
IKLD
>Mature_324_residues
MQNLPAFIRRSMALLALAATAASAQSFPTRPIEWVVPYPAGGGSDVVARALTEAMGSALGQPIVINNKPGAATNIGADYV
AHAKPDGYTVLTGDTATLAANPALYTKLSYSAEKDLAPIGLLARFPMILVVNPAIPVKNLAEFTAWAKTQKSGVSYATPG
AGSPHHLATELFRGKTGLNLVHVPYRGAAPAVQDVTGGQLPFMFVDTASGMAFINAGRLRPIGIASPHRVKNFEAIPTLD
EQGLKGFEAYVWQGLVAPAGTPADVIGKLNKTLVDALNSTSVKARFQVLGLEPTPSTPAQMATYAKAEREKWAQVIRASG
IKLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34009; Mature: 34009

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLPAFIRRSMALLALAATAASAQSFPTRPIEWVVPYPAGGGSDVVARALTEAMGSALG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCC
QPIVINNKPGAATNIGADYVAHAKPDGYTVLTGDTATLAANPALYTKLSYSAEKDLAPIG
CCEEEECCCCCCCCCCCCCEECCCCCCEEEEECCCEEEECCCHHEEEECCCCCCCCCHHH
LLARFPMILVVNPAIPVKNLAEFTAWAKTQKSGVSYATPGAGSPHHLATELFRGKTGLNL
HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCEE
VHVPYRGAAPAVQDVTGGQLPFMFVDTASGMAFINAGRLRPIGIASPHRVKNFEAIPTLD
EEECCCCCCCCHHCCCCCCCCEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCC
EQGLKGFEAYVWQGLVAPAGTPADVIGKLNKTLVDALNSTSVKARFQVLGLEPTPSTPAQ
HHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHH
MATYAKAEREKWAQVIRASGIKLD
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQNLPAFIRRSMALLALAATAASAQSFPTRPIEWVVPYPAGGGSDVVARALTEAMGSALG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCC
QPIVINNKPGAATNIGADYVAHAKPDGYTVLTGDTATLAANPALYTKLSYSAEKDLAPIG
CCEEEECCCCCCCCCCCCCEECCCCCCEEEEECCCEEEECCCHHEEEECCCCCCCCCHHH
LLARFPMILVVNPAIPVKNLAEFTAWAKTQKSGVSYATPGAGSPHHLATELFRGKTGLNL
HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCEE
VHVPYRGAAPAVQDVTGGQLPFMFVDTASGMAFINAGRLRPIGIASPHRVKNFEAIPTLD
EEECCCCCCCCHHCCCCCCCCEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCC
EQGLKGFEAYVWQGLVAPAGTPADVIGKLNKTLVDALNSTSVKARFQVLGLEPTPSTPAQ
HHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHH
MATYAKAEREKWAQVIRASGIKLD
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]