Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788741
Identifier: 91788741
GI number: 91788741
Start: 3041645
End: 3042820
Strand: Reverse
Name: 91788741
Synonym: Bpro_2880
Alternate gene names: NA
Gene position: 3042820-3041645 (Counterclockwise)
Preceding gene: 91788742
Following gene: 91788740
Centisome position: 58.51
GC content: 62.59
Gene sequence:
>1176_bases ATGAACAAAACCCTCCGCACGCAGCGCGGCTTCACTTTGGTGGAGTTGATGATTTCGCTGGTCCTCGGATTGCTGATCAT CCTGGCTCTCCTCACCATGCTGATCAACGTCAATCGCAACAACAGCGAACTGAGCTCCACGAACCGGCTCATCGAGAACG GACGCTTTGCCGTGCAGCTGCTGTCGTCCGACGTGGCGCATGCGGGCTACTGGTCCGGCCATGTTCCCGAGTTCGACAAT TTGACGGGCTCGACCACCGTCGGGCCGACGGACGTGCCGACAGCCGTGCCCGATCCGTGTCAGGCCTTCGCGGCGTGGGA CGCGGCGTACAAGACCAACCTGATCGGTATGGCGGTGCAAGGAACCGACATCCTGGACGTGTCATCCCCGTCGGCGCCGG TCTGCGCCGGCGTTGTTACAAATCCCCAGCGAAATACTGACCTACTTGTGGTGCGCCATGCGGAACCATGCCTCGTCGGC TCGGGTACGGACGACTGTTCTGACACCCGTGCCGCCACCTCACCGCATGTGTATGTTCAGGCGTCCCGGTGCGGGGACGA CACCACGACTCTTGTGCTGGGCACCACTGGCTTCACCTTGAAGGCGGGCGACTGTACCGCGGATGCCCCCATCAGGCGGT TCTCCTCCAGCATCTACTACGTACGCGATCACGCCAACGCGGCGGGAGACGGCATACCGACACTGATGCGCGCGCGTTTT GGTGTCAACGGTACCCCGCAATTCCTGTCCGCCCAGGCGCTGGTGGAGGGGGTACAGGGCTTCAGGGTGGAATATGGAGT GGACAACAGGAGCGACACCGCCGCCACGGTCGACCTGGCGGCGCTGGCCTTGCCGATCGCGTGGCCGACAGGCGCCACCG TGCTGAACACCCCCACGAATCGCGGCAATGGTCTGCCGGACGAATACATCCGCTGCTCGCAAGCAACGCCCTGTACTGCG GATCAGCTGGTGAACGTGACGGTGGTCAAGCTGTACGTGCTGGTGCGAGCGGAAAGGACCACGCCAGGCCATACGGACAC CAAGCAATACTGCCTGGCCAGTTCCTGTACCAATCCGACGGACTACATGGGCCCGTTCAACGACGGCTACAAGCGCCACC TGTTTACCCAGACCATCCGCTTGACCAACGTAGCCACGCGCAGGGAGACGCCATGA
Upstream 100 bases:
>100_bases TCGCTTGCGGCGCCGGCCAGTTCAATGGCGACAGCGCGTCCAGTTGCAAGAACGACCTGTGCCGACGTGCCGTGACCACC TTGGTTCGAGTCGCCACCCT
Downstream 100 bases:
>100_bases GTTCGATGGTTAGAGGCTCGCGACCTGGGCGGGGCCAGAGAGGCGCCACGCTGGTGGTCGCGCTGATCATGCTGACCTTG ATCACCCTTCTGGTGGTCAA
Product: putative type 4 fimbrial biogenesis pilw-like protein transmembrane
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNKTLRTQRGFTLVELMISLVLGLLIILALLTMLINVNRNNSELSSTNRLIENGRFAVQLLSSDVAHAGYWSGHVPEFDN LTGSTTVGPTDVPTAVPDPCQAFAAWDAAYKTNLIGMAVQGTDILDVSSPSAPVCAGVVTNPQRNTDLLVVRHAEPCLVG SGTDDCSDTRAATSPHVYVQASRCGDDTTTLVLGTTGFTLKAGDCTADAPIRRFSSSIYYVRDHANAAGDGIPTLMRARF GVNGTPQFLSAQALVEGVQGFRVEYGVDNRSDTAATVDLAALALPIAWPTGATVLNTPTNRGNGLPDEYIRCSQATPCTA DQLVNVTVVKLYVLVRAERTTPGHTDTKQYCLASSCTNPTDYMGPFNDGYKRHLFTQTIRLTNVATRRETP
Sequences:
>Translated_391_residues MNKTLRTQRGFTLVELMISLVLGLLIILALLTMLINVNRNNSELSSTNRLIENGRFAVQLLSSDVAHAGYWSGHVPEFDN LTGSTTVGPTDVPTAVPDPCQAFAAWDAAYKTNLIGMAVQGTDILDVSSPSAPVCAGVVTNPQRNTDLLVVRHAEPCLVG SGTDDCSDTRAATSPHVYVQASRCGDDTTTLVLGTTGFTLKAGDCTADAPIRRFSSSIYYVRDHANAAGDGIPTLMRARF GVNGTPQFLSAQALVEGVQGFRVEYGVDNRSDTAATVDLAALALPIAWPTGATVLNTPTNRGNGLPDEYIRCSQATPCTA DQLVNVTVVKLYVLVRAERTTPGHTDTKQYCLASSCTNPTDYMGPFNDGYKRHLFTQTIRLTNVATRRETP >Mature_391_residues MNKTLRTQRGFTLVELMISLVLGLLIILALLTMLINVNRNNSELSSTNRLIENGRFAVQLLSSDVAHAGYWSGHVPEFDN LTGSTTVGPTDVPTAVPDPCQAFAAWDAAYKTNLIGMAVQGTDILDVSSPSAPVCAGVVTNPQRNTDLLVVRHAEPCLVG SGTDDCSDTRAATSPHVYVQASRCGDDTTTLVLGTTGFTLKAGDCTADAPIRRFSSSIYYVRDHANAAGDGIPTLMRARF GVNGTPQFLSAQALVEGVQGFRVEYGVDNRSDTAATVDLAALALPIAWPTGATVLNTPTNRGNGLPDEYIRCSQATPCTA DQLVNVTVVKLYVLVRAERTTPGHTDTKQYCLASSCTNPTDYMGPFNDGYKRHLFTQTIRLTNVATRRETP
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41904; Mature: 41904
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTLRTQRGFTLVELMISLVLGLLIILALLTMLINVNRNNSELSSTNRLIENGRFAVQL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEE LSSDVAHAGYWSGHVPEFDNLTGSTTVGPTDVPTAVPDPCQAFAAWDAAYKTNLIGMAVQ HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEC GTDILDVSSPSAPVCAGVVTNPQRNTDLLVVRHAEPCLVGSGTDDCSDTRAATSPHVYVQ CCEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEE ASRCGDDTTTLVLGTTGFTLKAGDCTADAPIRRFSSSIYYVRDHANAAGDGIPTLMRARF EECCCCCCEEEEEECCCCEEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHC GVNGTPQFLSAQALVEGVQGFRVEYGVDNRSDTAATVDLAALALPIAWPTGATVLNTPTN CCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHEEEECCCCCEEEECCCC RGNGLPDEYIRCSQATPCTADQLVNVTVVKLYVLVRAERTTPGHTDTKQYCLASSCTNPT CCCCCCHHHHCCCCCCCCCHHHHHHHHHHEEEEHEEECCCCCCCCCHHHHHHHHCCCCCH DYMGPFNDGYKRHLFTQTIRLTNVATRRETP HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKTLRTQRGFTLVELMISLVLGLLIILALLTMLINVNRNNSELSSTNRLIENGRFAVQL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEE LSSDVAHAGYWSGHVPEFDNLTGSTTVGPTDVPTAVPDPCQAFAAWDAAYKTNLIGMAVQ HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEC GTDILDVSSPSAPVCAGVVTNPQRNTDLLVVRHAEPCLVGSGTDDCSDTRAATSPHVYVQ CCEEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEE ASRCGDDTTTLVLGTTGFTLKAGDCTADAPIRRFSSSIYYVRDHANAAGDGIPTLMRARF EECCCCCCEEEEEECCCCEEECCCCCCCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHC GVNGTPQFLSAQALVEGVQGFRVEYGVDNRSDTAATVDLAALALPIAWPTGATVLNTPTN CCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHEEEECCCCCEEEECCCC RGNGLPDEYIRCSQATPCTADQLVNVTVVKLYVLVRAERTTPGHTDTKQYCLASSCTNPT CCCCCCHHHHCCCCCCCCCHHHHHHHHHHEEEEHEEECCCCCCCCCHHHHHHHHCCCCCH DYMGPFNDGYKRHLFTQTIRLTNVATRRETP HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA