Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is exeA [H]
Identifier: 91788684
GI number: 91788684
Start: 2966945
End: 2968615
Strand: Reverse
Name: exeA [H]
Synonym: Bpro_2822
Alternate gene names: 91788684
Gene position: 2968615-2966945 (Counterclockwise)
Preceding gene: 91788685
Following gene: 91788683
Centisome position: 57.09
GC content: 67.68
Gene sequence:
>1671_bases ATGTACATGCCATTTTTCGGCCTGACACAGGCGCCGTTTTCGCTCGCTCCGGACCCGCGTCTGCTGTTTATGAGCGACCG GCATCGCGAAGCGCTGGCGCACCTGCTGTACGGGCTGGGTGGCGGAGGTGGCTTTGTGCTGCTGACCGGCGAGATCGGCA CTGGCAAGACCACGGTGTGCCGCTGCTTTCTGGAGCAGATTCCGGCCCACTGCAACGTCGCCTACATCTTCAATCCCAAG CTCACGGTAACCGAGCTGCTGCAGTCGATCTGCGACGAGTTCCATGTCACGGTGCCGCAAAAAGAGCTGCTGCCGCTCAC GGTCAAGGATTACCTCGATCCGCTCAACACCTTCCTGCTGCAGGCCCATGCCGCCGGGCAGAACAACGTGCTGATCATTG ACGAGGCGCAGAACCTGTCTGCCGAGGTGCTGGAGCAGCTGCGCCTGCTCACCAACCTGGAAACCAGCGAGCGCAAGCTG CTGCAGATCGTCCTGATCGGCCAGCCCGAGCTGCGCACCATGCTGCAGCGGCCCGAACTGGAGCAACTGGCTCAGCGCGT GATCGCACGCTTTCACCTCGACGCACTCACCGAGGCCGAGACGGCGCAGTACATCCTGCATCGCCTTGAAGTGTCCGGCC TGAATCGCGCGCTGCCGTTCGATCGCAAGGCCCTCAAACGCATCCACCAGCGCGCGCGCGGCGTGCCCCGCCGCATCAAC CTGTTGTGCGACCGTGCTTTGCTGGGAGCCTTTGCGGGCGGCCAGGCCACGGTCAACCGCGGCATCGTCAACAAGGCGGC GGACGAGGTGTTTGACCCGCCGGTGCGCGCATCATCTTTAACATGGCGCTGGCAGCGCAGCCTTGCCCTGGTGGGCTTGA GTGTCGCCGCCGGCGCCGGGCTGCTCGCCACGGCCCGCCTTGCGACGCAGACGCCGCAAGCGCCGCATGCACCCGAGATC GCAGCAGTTGCCACGCCAACTGACGCAGCCGCACCCGCAGCGGTTGCGGCCTCCGGACCGGTGATGGCCGCTGCGGCAGC CGACGCAACCCTCGCCCCGCCCACGCCACCCGCGCCGCCCGCGCAGCCCCCCATCTTGCTGCGCGACGAAGGCCAGGCCT GGCGCGAACTGGCGCAGGCCTGGAAACTGACCCCCGGGGAGGGCGACCCCTGCCAGGCGCTGCAGCGCGAGCAGGTGCGG TGCTTCAGCAGCAACACCAGCCTGGCCCTGATCCGCCAGCTGGGCCGCCCCGGCATCGTCAAGCTCGACAGCCAAAGCGG CTCGCCTTCTTATGCCTTGCTCACCGCCCTGACAGACGACAGCGCCACCTTGCGCGCCGGGGGCATCGAGCAGACCGTCA CACTGGCCGCGCTGGCCGCGCGCTGGCAAGGCGACTTTTCCACGCTCTGGCGTTCACCCGCCGGTTATGGAGGCCGCCCC CTTGATAGCCAGAGCGGCCCGGTGGTCGAATGGGTTGCGGCCCGGTTGACCGCAGTGGATGGCACGGCGCAGGCGGGCCG GCCCGTGCTGGATGCCTCGCTCAGAGCCCGCCTGCGCACTTTTCAATTGGCCCAGGGCCTGCCCACCGACGGCCGACTCG GGCCGTTAACTTTTATGCAGCTCAATCGCACGGCCGGCGTGGACGAGCCGCGCCTTCGAACCGGGCCCTGA
Upstream 100 bases:
>100_bases GTCGCTGACCCCACCTATTCATGGCACCGGGCACTGATCGCCAGCGCGGCGCGGGTTATTACTAGCACCCAACGATGGTG GTGCGGTATCCTTTGCACCC
Downstream 100 bases:
>100_bases CCCCATGTCTTACATTCTCGACGCACTTCGGAAGGCCGACGCCCAGCGCGAACGCGACCCGGCACGGGGCATTCATGCCC AGCCCGTGCAGGTGTCGCCG
Product: peptidoglycan-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MYMPFFGLTQAPFSLAPDPRLLFMSDRHREALAHLLYGLGGGGGFVLLTGEIGTGKTTVCRCFLEQIPAHCNVAYIFNPK LTVTELLQSICDEFHVTVPQKELLPLTVKDYLDPLNTFLLQAHAAGQNNVLIIDEAQNLSAEVLEQLRLLTNLETSERKL LQIVLIGQPELRTMLQRPELEQLAQRVIARFHLDALTEAETAQYILHRLEVSGLNRALPFDRKALKRIHQRARGVPRRIN LLCDRALLGAFAGGQATVNRGIVNKAADEVFDPPVRASSLTWRWQRSLALVGLSVAAGAGLLATARLATQTPQAPHAPEI AAVATPTDAAAPAAVAASGPVMAAAAADATLAPPTPPAPPAQPPILLRDEGQAWRELAQAWKLTPGEGDPCQALQREQVR CFSSNTSLALIRQLGRPGIVKLDSQSGSPSYALLTALTDDSATLRAGGIEQTVTLAALAARWQGDFSTLWRSPAGYGGRP LDSQSGPVVEWVAARLTAVDGTAQAGRPVLDASLRARLRTFQLAQGLPTDGRLGPLTFMQLNRTAGVDEPRLRTGP
Sequences:
>Translated_556_residues MYMPFFGLTQAPFSLAPDPRLLFMSDRHREALAHLLYGLGGGGGFVLLTGEIGTGKTTVCRCFLEQIPAHCNVAYIFNPK LTVTELLQSICDEFHVTVPQKELLPLTVKDYLDPLNTFLLQAHAAGQNNVLIIDEAQNLSAEVLEQLRLLTNLETSERKL LQIVLIGQPELRTMLQRPELEQLAQRVIARFHLDALTEAETAQYILHRLEVSGLNRALPFDRKALKRIHQRARGVPRRIN LLCDRALLGAFAGGQATVNRGIVNKAADEVFDPPVRASSLTWRWQRSLALVGLSVAAGAGLLATARLATQTPQAPHAPEI AAVATPTDAAAPAAVAASGPVMAAAAADATLAPPTPPAPPAQPPILLRDEGQAWRELAQAWKLTPGEGDPCQALQREQVR CFSSNTSLALIRQLGRPGIVKLDSQSGSPSYALLTALTDDSATLRAGGIEQTVTLAALAARWQGDFSTLWRSPAGYGGRP LDSQSGPVVEWVAARLTAVDGTAQAGRPVLDASLRARLRTFQLAQGLPTDGRLGPLTFMQLNRTAGVDEPRLRTGP >Mature_556_residues MYMPFFGLTQAPFSLAPDPRLLFMSDRHREALAHLLYGLGGGGGFVLLTGEIGTGKTTVCRCFLEQIPAHCNVAYIFNPK LTVTELLQSICDEFHVTVPQKELLPLTVKDYLDPLNTFLLQAHAAGQNNVLIIDEAQNLSAEVLEQLRLLTNLETSERKL LQIVLIGQPELRTMLQRPELEQLAQRVIARFHLDALTEAETAQYILHRLEVSGLNRALPFDRKALKRIHQRARGVPRRIN LLCDRALLGAFAGGQATVNRGIVNKAADEVFDPPVRASSLTWRWQRSLALVGLSVAAGAGLLATARLATQTPQAPHAPEI AAVATPTDAAAPAAVAASGPVMAAAAADATLAPPTPPAPPAQPPILLRDEGQAWRELAQAWKLTPGEGDPCQALQREQVR CFSSNTSLALIRQLGRPGIVKLDSQSGSPSYALLTALTDDSATLRAGGIEQTVTLAALAARWQGDFSTLWRSPAGYGGRP LDSQSGPVVEWVAARLTAVDGTAQAGRPVLDASLRARLRTFQLAQGLPTDGRLGPLTFMQLNRTAGVDEPRLRTGP
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 59826; Mature: 59826
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMPFFGLTQAPFSLAPDPRLLFMSDRHREALAHLLYGLGGGGGFVLLTGEIGTGKTTVC CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHH RCFLEQIPAHCNVAYIFNPKLTVTELLQSICDEFHVTVPQKELLPLTVKDYLDPLNTFLL HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHEECCCHHHCCCEEHHHHHHHHHHHHH QAHAAGQNNVLIIDEAQNLSAEVLEQLRLLTNLETSERKLLQIVLIGQPELRTMLQRPEL HHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHEEEEEEEECCHHHHHHHCCCCH EQLAQRVIARFHLDALTEAETAQYILHRLEVSGLNRALPFDRKALKRIHQRARGVPRRIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHH LLCDRALLGAFAGGQATVNRGIVNKAADEVFDPPVRASSLTWRWQRSLALVGLSVAAGAG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCC LLATARLATQTPQAPHAPEIAAVATPTDAAAPAAVAASGPVMAAAAADATLAPPTPPAPP HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCC AQPPILLRDEGQAWRELAQAWKLTPGEGDPCQALQREQVRCFSSNTSLALIRQLGRPGIV CCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEE KLDSQSGSPSYALLTALTDDSATLRAGGIEQTVTLAALAARWQGDFSTLWRSPAGYGGRP EEECCCCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC LDSQSGPVVEWVAARLTAVDGTAQAGRPVLDASLRARLRTFQLAQGLPTDGRLGPLTFMQ CCCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE LNRTAGVDEPRLRTGP ECCCCCCCCCCCCCCC >Mature Secondary Structure MYMPFFGLTQAPFSLAPDPRLLFMSDRHREALAHLLYGLGGGGGFVLLTGEIGTGKTTVC CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHH RCFLEQIPAHCNVAYIFNPKLTVTELLQSICDEFHVTVPQKELLPLTVKDYLDPLNTFLL HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHEECCCHHHCCCEEHHHHHHHHHHHHH QAHAAGQNNVLIIDEAQNLSAEVLEQLRLLTNLETSERKLLQIVLIGQPELRTMLQRPEL HHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHEEEEEEEECCHHHHHHHCCCCH EQLAQRVIARFHLDALTEAETAQYILHRLEVSGLNRALPFDRKALKRIHQRARGVPRRIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHH LLCDRALLGAFAGGQATVNRGIVNKAADEVFDPPVRASSLTWRWQRSLALVGLSVAAGAG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCC LLATARLATQTPQAPHAPEIAAVATPTDAAAPAAVAASGPVMAAAAADATLAPPTPPAPP HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCC AQPPILLRDEGQAWRELAQAWKLTPGEGDPCQALQREQVRCFSSNTSLALIRQLGRPGIV CCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEE KLDSQSGSPSYALLTALTDDSATLRAGGIEQTVTLAALAARWQGDFSTLWRSPAGYGGRP EEECCCCCCCEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC LDSQSGPVVEWVAARLTAVDGTAQAGRPVLDASLRARLRTFQLAQGLPTDGRLGPLTFMQ CCCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE LNRTAGVDEPRLRTGP ECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]