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The map label for this gene is ycgM [C]

Identifier: 91788654

GI number: 91788654

Start: 2932694

End: 2933461

Strand: Direct

Name: ycgM [C]

Synonym: Bpro_2792

Alternate gene names: 91788654

Gene position: 2932694-2933461 (Clockwise)

Preceding gene: 91788653

Following gene: 91788655

Centisome position: 56.4

GC content: 58.07

Gene sequence:

>768_bases
ATGTCAAAACAATGGGTGAGATTTCAAGACGGCAACACGATTCGCTTTGGAACCCTGGAGGGCGAGCGCGTGAGGATGTG
GGACGGCGATATGTTCGCCGGCGCAACACACACGGACCGGATATTCCCGCTGGCCGACGTGACGCTGCTGATGCCTGTGC
AGCCCGGCAAAGTCATTGCGCTATGGAACAACTTCCGCGCGCTGGGCGACAAGCTCAACCTGCCAGTGCCCGCCGAGCCG
CTGTACCTGCTCAAGGCTCCGAATTCCTACCTGAATCCCAACGAAACCATCCGCAAGCCGGCATGCGACGGAAAGGTGGT
TTTTGAAGGTGAGCTCGGCATTGTGATTGGCAAGACCTGCAAGGAAGTCGCCGAACAGCAGGCGCTGGATCATGTGTTTG
GCTACACCTGCGCCAACGACGTGACCGTCGCCGATATCCTGAACCGCGACGCGTCCTTTGCCCAATGGGTGCGCGCCAAG
GGTTTCGACACCTTTTGCCCTCTCGGGCCGGTGGTGGCCACCGGTCTTGACCCGACAAAGCTGGTGGTGAAAACCATCCT
CAACGGAGACATCCGTCAGGACTACCCCGTCAGCGACATGCGATTTTCAGTCCAGCAACTGGTGAGCCTGATTTCGAAAG
ACATGACGTTATACCCCGGCGATGTCATCCTGTGCGGTACATCCATCGGTGTGGGGGCCATGAAGCCAGGAAGCACCGTT
GAAGTCGAGATTGCCGGTATCGGCAAGCTCAAAAACCGGTTCGAGTAA

Upstream 100 bases:

>100_bases
CGGCTGACAGCCTGAACCGCTCATTGGCCACGCCAAAACGCGCAGACCGGGGTGCCGTTACCCGGTCTGCGCCGACTTTT
TTTAAACTTGAGAGGTTGGT

Downstream 100 bases:

>100_bases
CGTTTTTATATTGGAGCACCGTGTGAAAATTGCGATCATTGGAGCAGGAGCCATTGGCGGCTACGTGGGGGTAAAGCTGG
CGCTGGCCGGCGAGGACGTC

Product: 5-carboxymethyl-2-hydroxymuconate delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSKQWVRFQDGNTIRFGTLEGERVRMWDGDMFAGATHTDRIFPLADVTLLMPVQPGKVIALWNNFRALGDKLNLPVPAEP
LYLLKAPNSYLNPNETIRKPACDGKVVFEGELGIVIGKTCKEVAEQQALDHVFGYTCANDVTVADILNRDASFAQWVRAK
GFDTFCPLGPVVATGLDPTKLVVKTILNGDIRQDYPVSDMRFSVQQLVSLISKDMTLYPGDVILCGTSIGVGAMKPGSTV
EVEIAGIGKLKNRFE

Sequences:

>Translated_255_residues
MSKQWVRFQDGNTIRFGTLEGERVRMWDGDMFAGATHTDRIFPLADVTLLMPVQPGKVIALWNNFRALGDKLNLPVPAEP
LYLLKAPNSYLNPNETIRKPACDGKVVFEGELGIVIGKTCKEVAEQQALDHVFGYTCANDVTVADILNRDASFAQWVRAK
GFDTFCPLGPVVATGLDPTKLVVKTILNGDIRQDYPVSDMRFSVQQLVSLISKDMTLYPGDVILCGTSIGVGAMKPGSTV
EVEIAGIGKLKNRFE
>Mature_254_residues
SKQWVRFQDGNTIRFGTLEGERVRMWDGDMFAGATHTDRIFPLADVTLLMPVQPGKVIALWNNFRALGDKLNLPVPAEPL
YLLKAPNSYLNPNETIRKPACDGKVVFEGELGIVIGKTCKEVAEQQALDHVFGYTCANDVTVADILNRDASFAQWVRAKG
FDTFCPLGPVVATGLDPTKLVVKTILNGDIRQDYPVSDMRFSVQQLVSLISKDMTLYPGDVILCGTSIGVGAMKPGSTVE
VEIAGIGKLKNRFE

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI40786394, Length=224, Percent_Identity=37.0535714285714, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI156231349, Length=224, Percent_Identity=36.6071428571429, Blast_Score=135, Evalue=4e-32,
Organism=Homo sapiens, GI215422413, Length=198, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=32.8358208955224, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI66348062, Length=193, Percent_Identity=33.6787564766839, Blast_Score=105, Evalue=5e-23,
Organism=Escherichia coli, GI1787428, Length=194, Percent_Identity=30.4123711340206, Blast_Score=97, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17557057, Length=201, Percent_Identity=29.3532338308458, Blast_Score=87, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6324161, Length=223, Percent_Identity=28.2511210762332, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28572127, Length=220, Percent_Identity=37.7272727272727, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24663695, Length=219, Percent_Identity=34.2465753424658, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI28571789, Length=202, Percent_Identity=36.1386138613861, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 27979; Mature: 27847

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQWVRFQDGNTIRFGTLEGERVRMWDGDMFAGATHTDRIFPLADVTLLMPVQPGKVIA
CCCCEEEEECCCEEEEECCCCCEEEEECCCEECCCCCCCCEEEECCEEEEEECCCCCEEE
LWNNFRALGDKLNLPVPAEPLYLLKAPNSYLNPNETIRKPACDGKVVFEGELGIVIGKTC
EECCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCEEEEECCCCEEECHHH
KEVAEQQALDHVFGYTCANDVTVADILNRDASFAQWVRAKGFDTFCPLGPVVATGLDPTK
HHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCHHH
LVVKTILNGDIRQDYPVSDMRFSVQQLVSLISKDMTLYPGDVILCGTSIGVGAMKPGSTV
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCEE
EVEIAGIGKLKNRFE
EEEEECCCCHHHCCC
>Mature Secondary Structure 
SKQWVRFQDGNTIRFGTLEGERVRMWDGDMFAGATHTDRIFPLADVTLLMPVQPGKVIA
CCCEEEEECCCEEEEECCCCCEEEEECCCEECCCCCCCCEEEECCEEEEEECCCCCEEE
LWNNFRALGDKLNLPVPAEPLYLLKAPNSYLNPNETIRKPACDGKVVFEGELGIVIGKTC
EECCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCEEEEECCCCEEECHHH
KEVAEQQALDHVFGYTCANDVTVADILNRDASFAQWVRAKGFDTFCPLGPVVATGLDPTK
HHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCHHH
LVVKTILNGDIRQDYPVSDMRFSVQQLVSLISKDMTLYPGDVILCGTSIGVGAMKPGSTV
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCCCEE
EVEIAGIGKLKNRFE
EEEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]