Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788217
Identifier: 91788217
GI number: 91788217
Start: 2447532
End: 2448170
Strand: Direct
Name: 91788217
Synonym: Bpro_2350
Alternate gene names: NA
Gene position: 2447532-2448170 (Clockwise)
Preceding gene: 91788214
Following gene: 91788221
Centisome position: 47.07
GC content: 59.78
Gene sequence:
>639_bases ATGACCGATTGCGCGCAAACGATAAATAGTGCAGTACTCAACCATTCTGTTAGTATGGGAATTACCTCGAACGTTGTTGA TGCGAAAAGCAACCCGGATGCGCCCGCCGCATATGAGCAGGACATCCTGGGTGGACGGGCCTGCACGGTCACACCACTGC GCCTTGCGGCTCGCAGACTTGAGCAGCTGTATGACGAAGCGCTGGCACCGTTGAACCTCAAAGCCACGCAGCTCGCGCTC ATCGCAGGAATACACAGGCTCACGGGCGCCGATCAACAAGGACCGACGCTACAGGACCTGGCAGCCCTGCTCGCCATTCA ACTTTCTGCTCTTACCCATGCGCTAAGGCCTCTGGTGCGCGACGGAATTGTTGAGTTGCGTCAGGACGCCCAAGACCGCC GGACCAAGCACAGCGTTCTCACTTCGCTTGGCAAGACCCGGCTTTCAGAAGGCGTGGTGCGCTGGGCAGCAACAAACGAT CAAGTGGAAGCCGTTCTGGGTTCTGCCGCGGCTGCGCACTTGAGGGCCCTGACCGATCAGGTGGCTTCCGACGCGTTTCT GGTTGCCTATAGGGCGGAAGATCAGCCGCCGGCCCCCGTGGGTGTCCTCGGCTCCGAGCAAGCTGAGAAGAACGCCTGA
Upstream 100 bases:
>100_bases AGCCCCTGTGACAAGAGCGATTTTCTTAGAACTGGGGTTTGTCATTGATAGTTTTCCAATAAAATTGAGTGCTCAACTAA AAGGTTGAGGGCTCAAATGT
Downstream 100 bases:
>100_bases TTACAGCGGAGAAAGAGCCCCTGCTAGAAAGCGCATCAGCTCATCTCCTCCCGCTGGTCCAGTCGGTTTCGACCGATTAC ATTCCAAAGCATCCAACGCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTDCAQTINSAVLNHSVSMGITSNVVDAKSNPDAPAAYEQDILGGRACTVTPLRLAARRLEQLYDEALAPLNLKATQLAL IAGIHRLTGADQQGPTLQDLAALLAIQLSALTHALRPLVRDGIVELRQDAQDRRTKHSVLTSLGKTRLSEGVVRWAATND QVEAVLGSAAAAHLRALTDQVASDAFLVAYRAEDQPPAPVGVLGSEQAEKNA
Sequences:
>Translated_212_residues MTDCAQTINSAVLNHSVSMGITSNVVDAKSNPDAPAAYEQDILGGRACTVTPLRLAARRLEQLYDEALAPLNLKATQLAL IAGIHRLTGADQQGPTLQDLAALLAIQLSALTHALRPLVRDGIVELRQDAQDRRTKHSVLTSLGKTRLSEGVVRWAATND QVEAVLGSAAAAHLRALTDQVASDAFLVAYRAEDQPPAPVGVLGSEQAEKNA >Mature_211_residues TDCAQTINSAVLNHSVSMGITSNVVDAKSNPDAPAAYEQDILGGRACTVTPLRLAARRLEQLYDEALAPLNLKATQLALI AGIHRLTGADQQGPTLQDLAALLAIQLSALTHALRPLVRDGIVELRQDAQDRRTKHSVLTSLGKTRLSEGVVRWAATNDQ VEAVLGSAAAAHLRALTDQVASDAFLVAYRAEDQPPAPVGVLGSEQAEKNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22427; Mature: 22295
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDCAQTINSAVLNHSVSMGITSNVVDAKSNPDAPAAYEQDILGGRACTVTPLRLAARRL CCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH EQLYDEALAPLNLKATQLALIAGIHRLTGADQQGPTLQDLAALLAIQLSALTHALRPLVR HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DGIVELRQDAQDRRTKHSVLTSLGKTRLSEGVVRWAATNDQVEAVLGSAAAAHLRALTDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VASDAFLVAYRAEDQPPAPVGVLGSEQAEKNA HHCCCEEEEEECCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure TDCAQTINSAVLNHSVSMGITSNVVDAKSNPDAPAAYEQDILGGRACTVTPLRLAARRL CHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH EQLYDEALAPLNLKATQLALIAGIHRLTGADQQGPTLQDLAALLAIQLSALTHALRPLVR HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DGIVELRQDAQDRRTKHSVLTSLGKTRLSEGVVRWAATNDQVEAVLGSAAAAHLRALTDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VASDAFLVAYRAEDQPPAPVGVLGSEQAEKNA HHCCCEEEEEECCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA