Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is pssA [H]
Identifier: 91788189
GI number: 91788189
Start: 2413990
End: 2414802
Strand: Direct
Name: pssA [H]
Synonym: Bpro_2320
Alternate gene names: 91788189
Gene position: 2413990-2414802 (Clockwise)
Preceding gene: 91788188
Following gene: 91788190
Centisome position: 46.42
GC content: 56.83
Gene sequence:
>813_bases ATGCATGACGGCGAGGAATCGATTTCAGTGCCCGACGAGATAGTTGTGCGCAAACGGCGTAAAGGCATTTACATACTGCC CAACCTGTTTACGCTGGCGGCGCTGTTTGGTGGCTTCTATGCCATCGTCATGGCCATGAACGGGCGTTTTGACCAGGCGG CCATTGGTGTGTTTTGGGCCATGGTGCTCGATAGCCTGGATGGCCGGGTGGCTCGCATGACCAATACCCAAAGCGCCTTT GGCGAGCAGATGGACTCCCTGTCAGACATGGTTTCTTTTGGCGCGGCACCGGCATTGATCGCCTATGTATGGGCGCTTAC CAGCCTTGGACGCTGGGGCTGGATAGGTGCTTTTGTGTACTGTGCCTGCGCGGCGTTACGTCTGGCTCGCTTCAACGTCA ACACCGCCGTGGTTGACAAGCGATTTTTTCAGGGCCTCCCGTCGCCGGCCGCCGCGGCGCTTGTGGCTGGCTTTATCTGG CTGATGACCGACGCGGGAGTCGATGGGCTGGAGGTTCGCTGGATTACCTTTGGCCTGACGCTTTACGCCGGTTTGACGAT GGTGACCAATGTTCCGTTTTACAGCTTTAAGGATCTCAGCCTGAAGCGCAGTGTGCCATTTGCCGTCATTGTGCTGATCG CGCTGGGAATCGCGGTAATCAACATTCATCCTCCCACCGTGATGTTTGCGCTGTTTGTGATTTATGGGTTGTCCGGTTAC GTCTTGTATGGCTGGCGCAGGGCCAAGGGTCTGCAGACCAGCGTGATCTCGACGTCCACGGATGAGCCTGACGAGCGCGG TCTTCACAAATAA
Upstream 100 bases:
>100_bases GGTGTGCTATTCATCTGGTGTTTACCAGATGCCCATAGATGCTATGAATTAAGTAGCACGTAAACATTGCGCACAAGGCT TGTGCTTCAGGAGAATTTTT
Downstream 100 bases:
>100_bases AGTGTGGTATATTAATTTCATGAAACAAATTTCGCTTGCACTATTGCTATCTGCCAACGGGCGGAGACGGTAGCGCGCAC GCGTACACCCAATTCAACGG
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MHDGEESISVPDEIVVRKRRKGIYILPNLFTLAALFGGFYAIVMAMNGRFDQAAIGVFWAMVLDSLDGRVARMTNTQSAF GEQMDSLSDMVSFGAAPALIAYVWALTSLGRWGWIGAFVYCACAALRLARFNVNTAVVDKRFFQGLPSPAAAALVAGFIW LMTDAGVDGLEVRWITFGLTLYAGLTMVTNVPFYSFKDLSLKRSVPFAVIVLIALGIAVINIHPPTVMFALFVIYGLSGY VLYGWRRAKGLQTSVISTSTDEPDERGLHK
Sequences:
>Translated_270_residues MHDGEESISVPDEIVVRKRRKGIYILPNLFTLAALFGGFYAIVMAMNGRFDQAAIGVFWAMVLDSLDGRVARMTNTQSAF GEQMDSLSDMVSFGAAPALIAYVWALTSLGRWGWIGAFVYCACAALRLARFNVNTAVVDKRFFQGLPSPAAAALVAGFIW LMTDAGVDGLEVRWITFGLTLYAGLTMVTNVPFYSFKDLSLKRSVPFAVIVLIALGIAVINIHPPTVMFALFVIYGLSGY VLYGWRRAKGLQTSVISTSTDEPDERGLHK >Mature_270_residues MHDGEESISVPDEIVVRKRRKGIYILPNLFTLAALFGGFYAIVMAMNGRFDQAAIGVFWAMVLDSLDGRVARMTNTQSAF GEQMDSLSDMVSFGAAPALIAYVWALTSLGRWGWIGAFVYCACAALRLARFNVNTAVVDKRFFQGLPSPAAAALVAGFIW LMTDAGVDGLEVRWITFGLTLYAGLTMVTNVPFYSFKDLSLKRSVPFAVIVLIALGIAVINIHPPTVMFALFVIYGLSGY VLYGWRRAKGLQTSVISTSTDEPDERGLHK
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=160, Percent_Identity=38.125, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29542; Mature: 29542
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDGEESISVPDEIVVRKRRKGIYILPNLFTLAALFGGFYAIVMAMNGRFDQAAIGVFWA CCCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH MVLDSLDGRVARMTNTQSAFGEQMDSLSDMVSFGAAPALIAYVWALTSLGRWGWIGAFVY HHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH CACAALRLARFNVNTAVVDKRFFQGLPSPAAAALVAGFIWLMTDAGVDGLEVRWITFGLT HHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH LYAGLTMVTNVPFYSFKDLSLKRSVPFAVIVLIALGIAVINIHPPTVMFALFVIYGLSGY HHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCC VLYGWRRAKGLQTSVISTSTDEPDERGLHK EEEEEHHHCCCHHHHEECCCCCCHHCCCCC >Mature Secondary Structure MHDGEESISVPDEIVVRKRRKGIYILPNLFTLAALFGGFYAIVMAMNGRFDQAAIGVFWA CCCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH MVLDSLDGRVARMTNTQSAFGEQMDSLSDMVSFGAAPALIAYVWALTSLGRWGWIGAFVY HHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH CACAALRLARFNVNTAVVDKRFFQGLPSPAAAALVAGFIWLMTDAGVDGLEVRWITFGLT HHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH LYAGLTMVTNVPFYSFKDLSLKRSVPFAVIVLIALGIAVINIHPPTVMFALFVIYGLSGY HHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCC VLYGWRRAKGLQTSVISTSTDEPDERGLHK EEEEEHHHCCCHHHHEECCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]