Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is ilvI [H]
Identifier: 91788186
GI number: 91788186
Start: 2410211
End: 2411995
Strand: Direct
Name: ilvI [H]
Synonym: Bpro_2317
Alternate gene names: 91788186
Gene position: 2410211-2411995 (Clockwise)
Preceding gene: 91788179
Following gene: 91788187
Centisome position: 46.35
GC content: 59.44
Gene sequence:
>1785_bases ATGGAAGTCTCCAAGGCGGAAATTGCTTCCGCGGCAGCCGCGTCTGCCAACACAAACGCAAATTCTCAAGAACTCCGGGG CGCAGAAATCCTCGTGAAGTCGCTTCAGGCCGAGGGTGTCAAGTACATCTGGGGCTATCCGGGCGGCGCAGTTCTCCACA TCTACGATGCTTTTTACAAGCAGGACTCGATCCAGCACATCCTGGTGCGCCACGAACAGGCTGCGGTGCATGCGGCCGAC GGTTATGCCCGTGCCACGGGGGATGTCGGTGTCGCGCTGGTTACCTCCGGCCCGGGCGTAACCAATGCCGTGACCGGCAT CGCCACGGCCTATATGGACAGCATCCCGATGGTGATCATCACCGGCCAGGTGCCAACCCACGCTATTGGCCTGGATGCTT TTCAGGAGTGCGACACCGTCGGCATTACCCGTCCTATCGTCAAGCACAACTTCCTGGTCAAGGACGTGCGCCAGATGGCC GACACGCTTAAAAAGGCATTCCATATCGCCCGCAGCGGCCGGCCGGGCCCGGTGGTGGTTGACATCCCCAAAGACGTGTC GTTCAACAAGACGCTGTACACCGGTTATCCGCAGAGCGTCGAAATGCGTTCCTACAACCCGGTGCGCAAGGGACATGGCG GGCAGATTCGCAAGGCACTGCAACTGCTGATGTCGGCCAAGCGGCCATACATCTACACCGGTGGTGGCGTGCTGCTGAGC AATGCCTCGCAGGAGCTGCGCACGCTGGTGGACATGCTGGGCTATCCCTGCACCAACACGCTGATGGGGTTGGGCGCCTA TCCGGCCAGCGACAAAAAGTTTCTCGGCATGCTGGGAATGCACGGCACCATTGAGGCCAACAATGCGATGCAGCACTGCG ATGTATTGCTGGCAGTAGGGGCTCGTTTTGACGACCGCGTGATTGGCAACCCCAAGCACTTTGCGCAAAACGAGCGCAAG ATCATTCATGTCGACATCGACCCTTCGAGCATTTCCAAGCGCGTCAAGGTCGATATCCCCATCGTGGGCGATGTCAAGGA CGTGCTGACCGAGCTGATCAGCATGATCAGGGAGTCCGGTCTCAAGCCCGATGCCAATGCATTGGGCGGCTGGTGGGACA CCATTGAAGGCTGGCGCAAGCGCGACTGCATGAAGTACAGCATGGGCAAGGGCGATGTGATCAAGCCCCAGCATGTGATC GAGACGCTCTGGAACCTGACCAAGGACGCCGATACCTACATCACGTCGGATGTGGGCCAGCACCAGATGTGGGCCGCGCA GTACTACAAGTTTGACGAGCCGCGGCGCTGGATCAATTCGGGTGGATTGGGGACCATGGGCGTCGGCATTCCCTATGCCA TGGGCATCAAGCTGGCCAAACCCGACTCCGAGGTGTTCTGCATCACCGGGGAGGGCTCGGTGCAGATGTGTATCCAGGAG CTTTCGACCTGCCTGCAGTACAACACGCCGATCAAGATCGTGTCGCTCAACAACCGCTATCTGGGCATGGTTCGCCAGTG GCAGGAAGTGGAATACGCCGGGCGTTACAGCAGCAGCTACATGGACGCGCTGCCCAATTTCGTGAAGCTGGCCGAAGCCT ATGGGCACGTCGGCATGCTGATCGAAAAACCGCAGGATGTGGAGCCAGCGCTTCGTGAGGCCCGCAAGCTCAAGGACCGC ACGGTGTTCATGGACTTCCGCACGGATCCCACCGAGAACGTGTTCCCGATGGTGCAAGCCGGCAAGGGCATTACGGAAAT GCTGCTGGGCTCTGAAGACCTGTAA
Upstream 100 bases:
>100_bases TTCTGCTTATGGTTCTGGCCTCAAGTCTCAACGCTGCTTCACAAGAGTGGGCGAAGAGGCACCCAAGGTATTTCGTTAGA GAAATTCACAAAGGTTCATC
Downstream 100 bases:
>100_bases ACCCGCACCGTTCTATTTATCAACCGTCAACTGACGAATCTATTGTCTGCCAAGCCTGCGCATTACCGTGCGCGGGGGAG GGCAACGAAAAGAGGAATCT
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MEVSKAEIASAAAASANTNANSQELRGAEILVKSLQAEGVKYIWGYPGGAVLHIYDAFYKQDSIQHILVRHEQAAVHAAD GYARATGDVGVALVTSGPGVTNAVTGIATAYMDSIPMVIITGQVPTHAIGLDAFQECDTVGITRPIVKHNFLVKDVRQMA DTLKKAFHIARSGRPGPVVVDIPKDVSFNKTLYTGYPQSVEMRSYNPVRKGHGGQIRKALQLLMSAKRPYIYTGGGVLLS NASQELRTLVDMLGYPCTNTLMGLGAYPASDKKFLGMLGMHGTIEANNAMQHCDVLLAVGARFDDRVIGNPKHFAQNERK IIHVDIDPSSISKRVKVDIPIVGDVKDVLTELISMIRESGLKPDANALGGWWDTIEGWRKRDCMKYSMGKGDVIKPQHVI ETLWNLTKDADTYITSDVGQHQMWAAQYYKFDEPRRWINSGGLGTMGVGIPYAMGIKLAKPDSEVFCITGEGSVQMCIQE LSTCLQYNTPIKIVSLNNRYLGMVRQWQEVEYAGRYSSSYMDALPNFVKLAEAYGHVGMLIEKPQDVEPALREARKLKDR TVFMDFRTDPTENVFPMVQAGKGITEMLLGSEDL
Sequences:
>Translated_594_residues MEVSKAEIASAAAASANTNANSQELRGAEILVKSLQAEGVKYIWGYPGGAVLHIYDAFYKQDSIQHILVRHEQAAVHAAD GYARATGDVGVALVTSGPGVTNAVTGIATAYMDSIPMVIITGQVPTHAIGLDAFQECDTVGITRPIVKHNFLVKDVRQMA DTLKKAFHIARSGRPGPVVVDIPKDVSFNKTLYTGYPQSVEMRSYNPVRKGHGGQIRKALQLLMSAKRPYIYTGGGVLLS NASQELRTLVDMLGYPCTNTLMGLGAYPASDKKFLGMLGMHGTIEANNAMQHCDVLLAVGARFDDRVIGNPKHFAQNERK IIHVDIDPSSISKRVKVDIPIVGDVKDVLTELISMIRESGLKPDANALGGWWDTIEGWRKRDCMKYSMGKGDVIKPQHVI ETLWNLTKDADTYITSDVGQHQMWAAQYYKFDEPRRWINSGGLGTMGVGIPYAMGIKLAKPDSEVFCITGEGSVQMCIQE LSTCLQYNTPIKIVSLNNRYLGMVRQWQEVEYAGRYSSSYMDALPNFVKLAEAYGHVGMLIEKPQDVEPALREARKLKDR TVFMDFRTDPTENVFPMVQAGKGITEMLLGSEDL >Mature_594_residues MEVSKAEIASAAAASANTNANSQELRGAEILVKSLQAEGVKYIWGYPGGAVLHIYDAFYKQDSIQHILVRHEQAAVHAAD GYARATGDVGVALVTSGPGVTNAVTGIATAYMDSIPMVIITGQVPTHAIGLDAFQECDTVGITRPIVKHNFLVKDVRQMA DTLKKAFHIARSGRPGPVVVDIPKDVSFNKTLYTGYPQSVEMRSYNPVRKGHGGQIRKALQLLMSAKRPYIYTGGGVLLS NASQELRTLVDMLGYPCTNTLMGLGAYPASDKKFLGMLGMHGTIEANNAMQHCDVLLAVGARFDDRVIGNPKHFAQNERK IIHVDIDPSSISKRVKVDIPIVGDVKDVLTELISMIRESGLKPDANALGGWWDTIEGWRKRDCMKYSMGKGDVIKPQHVI ETLWNLTKDADTYITSDVGQHQMWAAQYYKFDEPRRWINSGGLGTMGVGIPYAMGIKLAKPDSEVFCITGEGSVQMCIQE LSTCLQYNTPIKIVSLNNRYLGMVRQWQEVEYAGRYSSSYMDALPNFVKLAEAYGHVGMLIEKPQDVEPALREARKLKDR TVFMDFRTDPTENVFPMVQAGKGITEMLLGSEDL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=571, Percent_Identity=25.3940455341506, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI21361361, Length=571, Percent_Identity=26.7950963222417, Blast_Score=172, Evalue=6e-43, Organism=Escherichia coli, GI87081685, Length=573, Percent_Identity=57.4171029668412, Blast_Score=682, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=576, Percent_Identity=40.625, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI1786717, Length=550, Percent_Identity=33.6363636363636, Blast_Score=301, Evalue=8e-83, Organism=Escherichia coli, GI1787096, Length=570, Percent_Identity=28.4210526315789, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI1788716, Length=565, Percent_Identity=24.7787610619469, Blast_Score=150, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17531301, Length=586, Percent_Identity=26.1092150170648, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17531299, Length=586, Percent_Identity=26.1092150170648, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17542570, Length=524, Percent_Identity=27.2900763358779, Blast_Score=148, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6323755, Length=602, Percent_Identity=41.3621262458472, Blast_Score=432, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6320816, Length=485, Percent_Identity=25.360824742268, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI19922626, Length=577, Percent_Identity=26.1698440207972, Blast_Score=179, Evalue=5e-45,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 65343; Mature: 65343
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVSKAEIASAAAASANTNANSQELRGAEILVKSLQAEGVKYIWGYPGGAVLHIYDAFYK CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHC QDSIQHILVRHEQAAVHAADGYARATGDVGVALVTSGPGVTNAVTGIATAYMDSIPMVII CCCHHHHHHHHHHHHEEECCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE TGQVPTHAIGLDAFQECDTVGITRPIVKHNFLVKDVRQMADTLKKAFHIARSGRPGPVVV ECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE DIPKDVSFNKTLYTGYPQSVEMRSYNPVRKGHGGQIRKALQLLMSAKRPYIYTGGGVLLS ECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEEC NASQELRTLVDMLGYPCTNTLMGLGAYPASDKKFLGMLGMHGTIEANNAMQHCDVLLAVG CCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHC ARFDDRVIGNPKHFAQNERKIIHVDIDPSSISKRVKVDIPIVGDVKDVLTELISMIRESG CCCCCCCCCCCHHHCCCCCEEEEEECCHHHCCCEEEEECCEECCHHHHHHHHHHHHHHCC LKPDANALGGWWDTIEGWRKRDCMKYSMGKGDVIKPQHVIETLWNLTKDADTYITSDVGQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCC HQMWAAQYYKFDEPRRWINSGGLGTMGVGIPYAMGIKLAKPDSEVFCITGEGSVQMCIQE HHHHHHHHHCCCCHHHHHCCCCCCEECCCCHHHHCEEEECCCCCEEEEECCCHHHHHHHH LSTCLQYNTPIKIVSLNNRYLGMVRQWQEVEYAGRYSSSYMDALPNFVKLAEAYGHVGML HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE IEKPQDVEPALREARKLKDRTVFMDFRTDPTENVFPMVQAGKGITEMLLGSEDL ECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCC >Mature Secondary Structure MEVSKAEIASAAAASANTNANSQELRGAEILVKSLQAEGVKYIWGYPGGAVLHIYDAFYK CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHC QDSIQHILVRHEQAAVHAADGYARATGDVGVALVTSGPGVTNAVTGIATAYMDSIPMVII CCCHHHHHHHHHHHHEEECCCCEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE TGQVPTHAIGLDAFQECDTVGITRPIVKHNFLVKDVRQMADTLKKAFHIARSGRPGPVVV ECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE DIPKDVSFNKTLYTGYPQSVEMRSYNPVRKGHGGQIRKALQLLMSAKRPYIYTGGGVLLS ECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEEC NASQELRTLVDMLGYPCTNTLMGLGAYPASDKKFLGMLGMHGTIEANNAMQHCDVLLAVG CCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCCHHHHHHHHHHHC ARFDDRVIGNPKHFAQNERKIIHVDIDPSSISKRVKVDIPIVGDVKDVLTELISMIRESG CCCCCCCCCCCHHHCCCCCEEEEEECCHHHCCCEEEEECCEECCHHHHHHHHHHHHHHCC LKPDANALGGWWDTIEGWRKRDCMKYSMGKGDVIKPQHVIETLWNLTKDADTYITSDVGQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCC HQMWAAQYYKFDEPRRWINSGGLGTMGVGIPYAMGIKLAKPDSEVFCITGEGSVQMCIQE HHHHHHHHHCCCCHHHHHCCCCCCEECCCCHHHHCEEEECCCCCEEEEECCCHHHHHHHH LSTCLQYNTPIKIVSLNNRYLGMVRQWQEVEYAGRYSSSYMDALPNFVKLAEAYGHVGML HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE IEKPQDVEPALREARKLKDRTVFMDFRTDPTENVFPMVQAGKGITEMLLGSEDL ECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]