Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yegM [C]

Identifier: 91788151

GI number: 91788151

Start: 2372272

End: 2373675

Strand: Direct

Name: yegM [C]

Synonym: Bpro_2282

Alternate gene names: 91788151

Gene position: 2372272-2373675 (Clockwise)

Preceding gene: 91788150

Following gene: 91788152

Centisome position: 45.62

GC content: 64.74

Gene sequence:

>1404_bases
ATGGCATCCAAAGCAATTTACACGGCGGTCGCGGTTGTGGGCATTGCGGTTGCCTCGGGCGCTGCATGGTGGTACCAGAA
GCCCAAATCCAATGAGGGCCGCGCAGGGGGATCGTCCGCGGCATCACCTGCGGCTTCGCCGGTTCAGGGGGCTGCCAGCG
CAAATGCAGGCGGCAAGCCGCCGAGCGTGGAGGTCGCCAGTGTGGAACTCACCCGCCTCGTGGACGATACCCAGGCCGTG
GGGACTCTGCGTTCGCGCCGGGGGGTGGTGCTGCGTCCGGAGGTCAGCGGGCGTATTACCCAGCTCAATTTCGTTGATGG
GCAGCGCGTGCACAAGGGCCAGGTGCTGGTGCAGTTTGATGACCAGCTGCCGCTGGCGCAAGTCCAGCAAAGCCTGGCTG
AGCTGTCGATTGCCCGGGCCAACCAGAAGCGTAACCAGGAACTGGTGGCACAAAACTTTATCAGCCAGCGCTCTCTCGAT
GAAAGTGCCGCCAACCTGCAGGTCGCTGAGGCCAAGCTGGCGCTGGCCAGGGCCACTGCGGCACGCCTGAAAATCGTGGC
ACCGTTTGACGGCATCGTCGGTATCCGGCAGGTCAACGTCGGCGACTACCTGAAGGACGGTGCGGACATCGTAAATATTG
AAGACATTGAAGCCATCTATGTTGACTTCAGGCTGCCGGAGCGTTTTCAGAGCAAGATCAAGCGCGGCCAGACGGCGCTG
CTGGACATCGATGCCTTGCCAGGTCGACCCTACACGGCACAGATTCAGGCCATTGATCCACTGATCGACGCCAATGGCCG
CTCAGTGGGGGTTCGGGGATGCATTGACAATCGCCAATTGCAGTTGCGACCGGGCATGTTTGCGCGCGTCAACACGGTCT
TTGGCGTGCGCGATAACGCCAGGGTGATTCCGGAAGAGGCCATTGTGCCGCTGGGCGGCAGACAGTTCGTCATCAAGCTG
CTGGGTAAACCGAACGATCCGACCAGGACGACCCAGCGCGTTGAAGTCAAGGTAGGTTTGCGCAGCCCTGGCAAGGTGGA
AATCCTCGAAGGGCTGGAGCCCGGAGACACTGTCGTGACGACGGGCCAGCAGCGCGTGCAGCGTGACGGTACTGCCGTCG
CTGTGGTGGATATGGCGAACACCCGATCGGCCCGCCCGGCGGCAGAGCGGCCCGCCACAGGCGCAGCATCCGCAGCCGCT
GCAGCTCCGGCTGCAGCCAGCGCGGCATCATCGGCCGCTCCTCGTCCAGGCCGTGCAGTGGCCAATGCCCCGGCGGCGCT
GTCGGGCCCCAACCCCTGTGGCGTGCTGGTCTCCGAGGCCGCCCCGGCGGCGCCTGCACCCATCCGCAACGCTGCAACAC
CCGAGCGTCGACCTGCCAGCCCGGCGGGCCGCGACCCGGCCTGA

Upstream 100 bases:

>100_bases
TGTCCACAACTTCGTGGTCAAGGACCTGGATAGGCTGCGCCCGGCGCCGCGTCCTGCTACATTGAAAGCTTGTTTCTTTT
CATAACAAGTTACTTCTTTC

Downstream 100 bases:

>100_bases
GCGTGAACCCCGGTGATTGACGCCATCAAGCCTTATGCAACTCGCTGAAGTCTCCATACGCCGCCCGGTATTTGCCACCG
TGCTGTCGCTGCTCATCGTG

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKPPSVEVASVELTRLVDDTQAV
GTLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFDDQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLD
ESAANLQVAEAKLALARATAARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTAL
LDIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNARVIPEEAIVPLGGRQFVIKL
LGKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVTTGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAA
AAPAAASAASSAAPRPGRAVANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA

Sequences:

>Translated_467_residues
MASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKPPSVEVASVELTRLVDDTQAV
GTLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFDDQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLD
ESAANLQVAEAKLALARATAARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTAL
LDIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNARVIPEEAIVPLGGRQFVIKL
LGKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVTTGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAA
AAPAAASAASSAAPRPGRAVANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA
>Mature_466_residues
ASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKPPSVEVASVELTRLVDDTQAVG
TLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFDDQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLDE
SAANLQVAEAKLALARATAARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTALL
DIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNARVIPEEAIVPLGGRQFVIKLL
GKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVTTGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAAA
APAAASAASSAAPRPGRAVANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=328, Percent_Identity=28.6585365853659, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1789929, Length=305, Percent_Identity=27.2131147540984, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1789665, Length=360, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87081796, Length=315, Percent_Identity=28.8888888888889, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786668, Length=342, Percent_Identity=25.1461988304094, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI87081951, Length=287, Percent_Identity=26.8292682926829, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 48708; Mature: 48577

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKP
CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSVEVASVELTRLVDDTQAVGTLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFD
CCEEEEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCEEECCEEEEEEC
DQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLDESAANLQVAEAKLALARATA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEHHHHHHHHHHHHH
ARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTAL
HEEEEEECCCCCEEEEEECCCHHHHCCCCEEEECCCEEEEEEEECCHHHHHHHHCCCEEE
LDIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNA
EEEECCCCCCCEEEEEEECCEECCCCCEEEEEECCCCCEEEECCCCEEEEEEEEECCCCC
RVIPEEAIVPLGGRQFVIKLLGKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVT
EECCHHHCCCCCCCEEEHEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEE
TGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAAAAPAAASAASSAAPRPGRAV
CCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCHH
ANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKP
CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSVEVASVELTRLVDDTQAVGTLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFD
CCEEEEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCEEECCEEEEEEC
DQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLDESAANLQVAEAKLALARATA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEHHHHHHHHHHHHH
ARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTAL
HEEEEEECCCCCEEEEEECCCHHHHCCCCEEEECCCEEEEEEEECCHHHHHHHHCCCEEE
LDIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNA
EEEECCCCCCCEEEEEEECCEECCCCCEEEEEECCCCCEEEECCCCEEEEEEEEECCCCC
RVIPEEAIVPLGGRQFVIKLLGKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVT
EECCHHHCCCCCCCEEEHEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEE
TGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAAAAPAAASAASSAAPRPGRAV
CCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCHH
ANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]