Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yegM [C]
Identifier: 91788151
GI number: 91788151
Start: 2372272
End: 2373675
Strand: Direct
Name: yegM [C]
Synonym: Bpro_2282
Alternate gene names: 91788151
Gene position: 2372272-2373675 (Clockwise)
Preceding gene: 91788150
Following gene: 91788152
Centisome position: 45.62
GC content: 64.74
Gene sequence:
>1404_bases ATGGCATCCAAAGCAATTTACACGGCGGTCGCGGTTGTGGGCATTGCGGTTGCCTCGGGCGCTGCATGGTGGTACCAGAA GCCCAAATCCAATGAGGGCCGCGCAGGGGGATCGTCCGCGGCATCACCTGCGGCTTCGCCGGTTCAGGGGGCTGCCAGCG CAAATGCAGGCGGCAAGCCGCCGAGCGTGGAGGTCGCCAGTGTGGAACTCACCCGCCTCGTGGACGATACCCAGGCCGTG GGGACTCTGCGTTCGCGCCGGGGGGTGGTGCTGCGTCCGGAGGTCAGCGGGCGTATTACCCAGCTCAATTTCGTTGATGG GCAGCGCGTGCACAAGGGCCAGGTGCTGGTGCAGTTTGATGACCAGCTGCCGCTGGCGCAAGTCCAGCAAAGCCTGGCTG AGCTGTCGATTGCCCGGGCCAACCAGAAGCGTAACCAGGAACTGGTGGCACAAAACTTTATCAGCCAGCGCTCTCTCGAT GAAAGTGCCGCCAACCTGCAGGTCGCTGAGGCCAAGCTGGCGCTGGCCAGGGCCACTGCGGCACGCCTGAAAATCGTGGC ACCGTTTGACGGCATCGTCGGTATCCGGCAGGTCAACGTCGGCGACTACCTGAAGGACGGTGCGGACATCGTAAATATTG AAGACATTGAAGCCATCTATGTTGACTTCAGGCTGCCGGAGCGTTTTCAGAGCAAGATCAAGCGCGGCCAGACGGCGCTG CTGGACATCGATGCCTTGCCAGGTCGACCCTACACGGCACAGATTCAGGCCATTGATCCACTGATCGACGCCAATGGCCG CTCAGTGGGGGTTCGGGGATGCATTGACAATCGCCAATTGCAGTTGCGACCGGGCATGTTTGCGCGCGTCAACACGGTCT TTGGCGTGCGCGATAACGCCAGGGTGATTCCGGAAGAGGCCATTGTGCCGCTGGGCGGCAGACAGTTCGTCATCAAGCTG CTGGGTAAACCGAACGATCCGACCAGGACGACCCAGCGCGTTGAAGTCAAGGTAGGTTTGCGCAGCCCTGGCAAGGTGGA AATCCTCGAAGGGCTGGAGCCCGGAGACACTGTCGTGACGACGGGCCAGCAGCGCGTGCAGCGTGACGGTACTGCCGTCG CTGTGGTGGATATGGCGAACACCCGATCGGCCCGCCCGGCGGCAGAGCGGCCCGCCACAGGCGCAGCATCCGCAGCCGCT GCAGCTCCGGCTGCAGCCAGCGCGGCATCATCGGCCGCTCCTCGTCCAGGCCGTGCAGTGGCCAATGCCCCGGCGGCGCT GTCGGGCCCCAACCCCTGTGGCGTGCTGGTCTCCGAGGCCGCCCCGGCGGCGCCTGCACCCATCCGCAACGCTGCAACAC CCGAGCGTCGACCTGCCAGCCCGGCGGGCCGCGACCCGGCCTGA
Upstream 100 bases:
>100_bases TGTCCACAACTTCGTGGTCAAGGACCTGGATAGGCTGCGCCCGGCGCCGCGTCCTGCTACATTGAAAGCTTGTTTCTTTT CATAACAAGTTACTTCTTTC
Downstream 100 bases:
>100_bases GCGTGAACCCCGGTGATTGACGCCATCAAGCCTTATGCAACTCGCTGAAGTCTCCATACGCCGCCCGGTATTTGCCACCG TGCTGTCGCTGCTCATCGTG
Product: secretion protein HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKPPSVEVASVELTRLVDDTQAV GTLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFDDQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLD ESAANLQVAEAKLALARATAARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTAL LDIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNARVIPEEAIVPLGGRQFVIKL LGKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVTTGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAA AAPAAASAASSAAPRPGRAVANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA
Sequences:
>Translated_467_residues MASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKPPSVEVASVELTRLVDDTQAV GTLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFDDQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLD ESAANLQVAEAKLALARATAARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTAL LDIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNARVIPEEAIVPLGGRQFVIKL LGKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVTTGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAA AAPAAASAASSAAPRPGRAVANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA >Mature_466_residues ASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKPPSVEVASVELTRLVDDTQAVG TLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFDDQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLDE SAANLQVAEAKLALARATAARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTALL DIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNARVIPEEAIVPLGGRQFVIKLL GKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVTTGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAAA APAAASAASSAAPRPGRAVANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082036, Length=328, Percent_Identity=28.6585365853659, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1789929, Length=305, Percent_Identity=27.2131147540984, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1789665, Length=360, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI87081796, Length=315, Percent_Identity=28.8888888888889, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786668, Length=342, Percent_Identity=25.1461988304094, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI87081951, Length=287, Percent_Identity=26.8292682926829, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 48708; Mature: 48577
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKP CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSVEVASVELTRLVDDTQAVGTLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFD CCEEEEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCEEECCEEEEEEC DQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLDESAANLQVAEAKLALARATA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEHHHHHHHHHHHHH ARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTAL HEEEEEECCCCCEEEEEECCCHHHHCCCCEEEECCCEEEEEEEECCHHHHHHHHCCCEEE LDIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNA EEEECCCCCCCEEEEEEECCEECCCCCEEEEEECCCCCEEEECCCCEEEEEEEEECCCCC RVIPEEAIVPLGGRQFVIKLLGKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVT EECCHHHCCCCCCCEEEHEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEE TGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAAAAPAAASAASSAAPRPGRAV CCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCHH ANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASKAIYTAVAVVGIAVASGAAWWYQKPKSNEGRAGGSSAASPAASPVQGAASANAGGKP CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSVEVASVELTRLVDDTQAVGTLRSRRGVVLRPEVSGRITQLNFVDGQRVHKGQVLVQFD CCEEEEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCEEECCEEEEEEC DQLPLAQVQQSLAELSIARANQKRNQELVAQNFISQRSLDESAANLQVAEAKLALARATA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEHHHHHHHHHHHHH ARLKIVAPFDGIVGIRQVNVGDYLKDGADIVNIEDIEAIYVDFRLPERFQSKIKRGQTAL HEEEEEECCCCCEEEEEECCCHHHHCCCCEEEECCCEEEEEEEECCHHHHHHHHCCCEEE LDIDALPGRPYTAQIQAIDPLIDANGRSVGVRGCIDNRQLQLRPGMFARVNTVFGVRDNA EEEECCCCCCCEEEEEEECCEECCCCCEEEEEECCCCCEEEECCCCEEEEEEEEECCCCC RVIPEEAIVPLGGRQFVIKLLGKPNDPTRTTQRVEVKVGLRSPGKVEILEGLEPGDTVVT EECCHHHCCCCCCCEEEHEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCEEEE TGQQRVQRDGTAVAVVDMANTRSARPAAERPATGAASAAAAAPAAASAASSAAPRPGRAV CCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCHH ANAPAALSGPNPCGVLVSEAAPAAPAPIRNAATPERRPASPAGRDPA CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]