Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788146
Identifier: 91788146
GI number: 91788146
Start: 2367440
End: 2368240
Strand: Direct
Name: 91788146
Synonym: Bpro_2276
Alternate gene names: NA
Gene position: 2367440-2368240 (Clockwise)
Preceding gene: 91788145
Following gene: 91788147
Centisome position: 45.53
GC content: 66.04
Gene sequence:
>801_bases ATGGGGCAGGCGATCGTGATCGAGAGCCAGCCCGGCGCGGCCGGCCTGATCGGTGCGGGTAGTGTGGCCAAGGCCGCGCC CGATGGCTACACCCTGGGCGGGTTCAACGACAGCATCATGACCCTGCTGCCCAACCTTCAGGCCAAAATGCCGTGGGACA TTTTGCGGGATTTCGAAGCAGTGTCGCTGGTGGCTACCGTCGAGTGGGGGCTGGTGGTGGGCGCTGACGCGCCGCAGCGC AGCGCAGCGGAACTGCTGGCGAGTGCCCGCAAGGCGCCTGGCCAGATCAACTACGGTTCGGGTGGCAACGGCAGCCCTCA GCACATTGCCATGGCCCTGTTCGCCTCGCAGGCTGGCGTGTCCATGACCCATGTGCCCTACAAGGGGGCCACCCAGGCGG CCATGGGCGTGGCCGGCAATGAAGTGCATGCAGCGTTCCAGGGCATCGCTACCGTCAACTCGCTGGTGCGCGCCGGCAAG GTGCGGCTGATTGGCGTGACCACGCCGCGCCGCATGCCGCAGTTTGCAGATGTACCCACGGTGTCCGAGTCCGGTCTGCC CGGTTTCGAGTTCAACTCCTGGTTTGCGTTGATGGCACCCGCTGGTACGCCCAAAGCCATTGTGCAGACGCTGCACAGCG AGATCAGCAAGGCCCTGGCTGACCCGGAGGTGCGCGAAAAATTGATCGGCCAGGGCCTCACACCGCGCGGCACCTCGCCG GATGAGCTGGCCAGAGACATGCGCACCCAGCTGGCTCGCTATGGCGCGCTGATCAAGCAGGCCGGTAGCACGGCAGAGTG A
Upstream 100 bases:
>100_bases TGCGCGGCAGCGAACGCATGCCCGGGGTGGACCGCATCTGGCTGCCGGGCGAACAAAGCCACGAGCGGCGCGCATTGTGG CGCAGAAGATGGGACAGAAC
Downstream 100 bases:
>100_bases ATCCGGTTCCGGCCGGCGTCCTGGTAAGCCCGGGTGCCTGCCAGGTTTGTGAAGCTCATCCTGCCGTCCTACAGCGGTGA CCCGTGTGCTTCAGTACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MGQAIVIESQPGAAGLIGAGSVAKAAPDGYTLGGFNDSIMTLLPNLQAKMPWDILRDFEAVSLVATVEWGLVVGADAPQR SAAELLASARKAPGQINYGSGGNGSPQHIAMALFASQAGVSMTHVPYKGATQAAMGVAGNEVHAAFQGIATVNSLVRAGK VRLIGVTTPRRMPQFADVPTVSESGLPGFEFNSWFALMAPAGTPKAIVQTLHSEISKALADPEVREKLIGQGLTPRGTSP DELARDMRTQLARYGALIKQAGSTAE
Sequences:
>Translated_266_residues MGQAIVIESQPGAAGLIGAGSVAKAAPDGYTLGGFNDSIMTLLPNLQAKMPWDILRDFEAVSLVATVEWGLVVGADAPQR SAAELLASARKAPGQINYGSGGNGSPQHIAMALFASQAGVSMTHVPYKGATQAAMGVAGNEVHAAFQGIATVNSLVRAGK VRLIGVTTPRRMPQFADVPTVSESGLPGFEFNSWFALMAPAGTPKAIVQTLHSEISKALADPEVREKLIGQGLTPRGTSP DELARDMRTQLARYGALIKQAGSTAE >Mature_265_residues GQAIVIESQPGAAGLIGAGSVAKAAPDGYTLGGFNDSIMTLLPNLQAKMPWDILRDFEAVSLVATVEWGLVVGADAPQRS AAELLASARKAPGQINYGSGGNGSPQHIAMALFASQAGVSMTHVPYKGATQAAMGVAGNEVHAAFQGIATVNSLVRAGKV RLIGVTTPRRMPQFADVPTVSESGLPGFEFNSWFALMAPAGTPKAIVQTLHSEISKALADPEVREKLIGQGLTPRGTSPD ELARDMRTQLARYGALIKQAGSTAE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 27547; Mature: 27416
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAIVIESQPGAAGLIGAGSVAKAAPDGYTLGGFNDSIMTLLPNLQAKMPWDILRDFEA CCCEEEEECCCCCCEEECCCCHHHCCCCCCEECCCCHHHHHHHCCCCCCCCHHHHHHHHH VSLVATVEWGLVVGADAPQRSAAELLASARKAPGQINYGSGGNGSPQHIAMALFASQAGV HHHHEEEEECEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCC SMTHVPYKGATQAAMGVAGNEVHAAFQGIATVNSLVRAGKVRLIGVTTPRRMPQFADVPT EEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC VSESGLPGFEFNSWFALMAPAGTPKAIVQTLHSEISKALADPEVREKLIGQGLTPRGTSP CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCH DELARDMRTQLARYGALIKQAGSTAE HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GQAIVIESQPGAAGLIGAGSVAKAAPDGYTLGGFNDSIMTLLPNLQAKMPWDILRDFEA CCEEEEECCCCCCEEECCCCHHHCCCCCCEECCCCHHHHHHHCCCCCCCCHHHHHHHHH VSLVATVEWGLVVGADAPQRSAAELLASARKAPGQINYGSGGNGSPQHIAMALFASQAGV HHHHEEEEECEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHCCC SMTHVPYKGATQAAMGVAGNEVHAAFQGIATVNSLVRAGKVRLIGVTTPRRMPQFADVPT EEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC VSESGLPGFEFNSWFALMAPAGTPKAIVQTLHSEISKALADPEVREKLIGQGLTPRGTSP CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCH DELARDMRTQLARYGALIKQAGSTAE HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]