Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788137
Identifier: 91788137
GI number: 91788137
Start: 2358206
End: 2359612
Strand: Direct
Name: 91788137
Synonym: Bpro_2266
Alternate gene names: NA
Gene position: 2358206-2359612 (Clockwise)
Preceding gene: 91788136
Following gene: 91788138
Centisome position: 45.35
GC content: 64.32
Gene sequence:
>1407_bases TTGAACGACTCGACTCTTCCTGTTAAATCGCTGCAGTCCACGCAGCACTCCCCATTGCGGGTTGCCGTCATCGGGGGCGG CCCGGCGGGCCTGATGGCTGCGGAAGTGCTGGCCGGCGCCGGCGCTGCCGTGTCGGTCACGGTCTACGATGCCATGCCCT CGGTCGGCCGCAAGTTTTTGCTGGCTGGCAAGGGTGGCCTCAACCTCACGCATTCAGAAGAGCCGCCGGTTTTCCTGGGC CGCTACGGCGAGCGCAGCGGCGAGCTGCAGCCTTTGCTGGCGGCCTTTGGCCCGACCCAACTGCGGGTCTGGGCCGGGGC ATTGGGTGTGGAAACCTTTGTCGGCAGTTCGGGCCGGGTGTTCCCCAAGGACATGAAGGCCGCGCCGCTGCTGCGCGCAT GGCTGCATCGCCTGCGTGGCGCGGGCGTGCAATTTTCCATGCGGCATCGCTGGCTGGGCTGGACCGACGACAGCGAGCCC AAGGGGGCTTTGAAATTCTCAACACCCTCCAGTGAAATGCAGGTACAGGCCGACGCCGTGGTGCTGGCGCTGGGTGGCGC CAGCTGGGCGCGTCTGGGATCGGATGGCGCATGGGTGCCGATATTGGCGGAGCGCGGCATCGCGATCGCGCCCCTGAAGC CGTCCAATTGTGGTTTCGATGTCTTTGCCCCGCTGGCTGCCCTGGCGGCGCCGGGCATGCTGGGGTCGGGCGAGAGCCGC CGTGAGTTCCTGAAAGAACTGATTGGTCAGGCACCCCCACCCCGCGTGGGCTGGACTGAGCATTTCACCAGCCGCTTCGC CGGTCAACCCTTCAAGTCGGTTGCCATCCACTTCACGGATTCACGCGGCCGCACTTTTCACCGGAAGGGGGAGTTCGTGG CGACCGCAACGGGCGTCGAGGGCAGTCTCATCTATGCCGTCTCAAGCCTGCTGCGCGATGAGATTGCCATGCATGCCAGT GCCACCTTCACGCTCGATCTGCTGCCGGACAAGTCGCCCGAGCAGGTCCTGGTTGAGGTGCGGCACCCGCGCGGCTCACG CTCGCTTTCCAGCCATCTGAAAAGCCGCCTGAACCTTGATGGCATCAAGGCCGCCATTCTTTATGAATTGCTGGGCAAGG ACGCCATCAACGACCCCATCCAGCTTGCCCACGCCATCAAGGCCTTGCCGGTGACGCTGCTGGCTCCCCGGCCGATCGAT GAGGCCATCAGCAGCGCTGGTGGCGTGCCCTTCGAGGCGATGGATGCGCACATGCAACTTCGAGCATCAAAAGGTACAGC CCAGCCCGTGTTTTGTGCCGGCGAAATGCTTGATTGGGAGGCGCCCACGGGTGGCTACCTGCTCACCGCCTGTTTTGCCA GCGGGCATGCTGCCGGCCAAGGTGTCATCAATTATTTTGGCCTTTAG
Upstream 100 bases:
>100_bases ACCCAAAAACCTCTGATACCGTGACTGCAGGTTTTGAGCCCACTTCTTGCAACGTACCCCAAACGTACCCCAACGTAGCC ATTAGGCAGACGGAATTTCC
Downstream 100 bases:
>100_bases TTCAAGCGGGACGGGTGGAAGAAGTGATTGATTTGGCAGAAAAATTTGACTGAAAATATTTTCAGCCGGCATTTGTAAAA AAGGGAAAACCATGATCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFLLAGKGGLNLTHSEEPPVFLG RYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRVFPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEP KGALKFSTPSSEMQVQADAVVLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVEGSLIYAVSSLLRDEIAMHAS ATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLDGIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPID EAISSAGGVPFEAMDAHMQLRASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL
Sequences:
>Translated_468_residues MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFLLAGKGGLNLTHSEEPPVFLG RYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRVFPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEP KGALKFSTPSSEMQVQADAVVLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVEGSLIYAVSSLLRDEIAMHAS ATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLDGIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPID EAISSAGGVPFEAMDAHMQLRASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL >Mature_468_residues MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFLLAGKGGLNLTHSEEPPVFLG RYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRVFPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEP KGALKFSTPSSEMQVQADAVVLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVEGSLIYAVSSLLRDEIAMHAS ATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLDGIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPID EAISSAGGVPFEAMDAHMQLRASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49523; Mature: 49523
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFL CCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHCCCEEE LAGKGGLNLTHSEEPPVFLGRYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRV EECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCC FPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEPKGALKFSTPSSEMQVQADAV CCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEE VLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR EEEECCCHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHH REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVE HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCEEEEECCCC GSLIYAVSSLLRDEIAMHASATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLD CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCC GIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPIDEAISSAGGVPFEAMDAHMQL HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCHHHHHHHHEE RASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL EECCCCCCCEEEECCEECCCCCCCCEEEEEHHHCCCCCCCCHHHHCCC >Mature Secondary Structure MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFL CCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHCCCEEE LAGKGGLNLTHSEEPPVFLGRYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRV EECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCC FPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEPKGALKFSTPSSEMQVQADAV CCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEE VLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR EEEECCCHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHH REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVE HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCEEEEECCCC GSLIYAVSSLLRDEIAMHASATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLD CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCC GIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPIDEAISSAGGVPFEAMDAHMQL HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCHHHHHHHHEE RASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL EECCCCCCCEEEECCEECCCCCCCCEEEEEHHHCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA