Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788137

Identifier: 91788137

GI number: 91788137

Start: 2358206

End: 2359612

Strand: Direct

Name: 91788137

Synonym: Bpro_2266

Alternate gene names: NA

Gene position: 2358206-2359612 (Clockwise)

Preceding gene: 91788136

Following gene: 91788138

Centisome position: 45.35

GC content: 64.32

Gene sequence:

>1407_bases
TTGAACGACTCGACTCTTCCTGTTAAATCGCTGCAGTCCACGCAGCACTCCCCATTGCGGGTTGCCGTCATCGGGGGCGG
CCCGGCGGGCCTGATGGCTGCGGAAGTGCTGGCCGGCGCCGGCGCTGCCGTGTCGGTCACGGTCTACGATGCCATGCCCT
CGGTCGGCCGCAAGTTTTTGCTGGCTGGCAAGGGTGGCCTCAACCTCACGCATTCAGAAGAGCCGCCGGTTTTCCTGGGC
CGCTACGGCGAGCGCAGCGGCGAGCTGCAGCCTTTGCTGGCGGCCTTTGGCCCGACCCAACTGCGGGTCTGGGCCGGGGC
ATTGGGTGTGGAAACCTTTGTCGGCAGTTCGGGCCGGGTGTTCCCCAAGGACATGAAGGCCGCGCCGCTGCTGCGCGCAT
GGCTGCATCGCCTGCGTGGCGCGGGCGTGCAATTTTCCATGCGGCATCGCTGGCTGGGCTGGACCGACGACAGCGAGCCC
AAGGGGGCTTTGAAATTCTCAACACCCTCCAGTGAAATGCAGGTACAGGCCGACGCCGTGGTGCTGGCGCTGGGTGGCGC
CAGCTGGGCGCGTCTGGGATCGGATGGCGCATGGGTGCCGATATTGGCGGAGCGCGGCATCGCGATCGCGCCCCTGAAGC
CGTCCAATTGTGGTTTCGATGTCTTTGCCCCGCTGGCTGCCCTGGCGGCGCCGGGCATGCTGGGGTCGGGCGAGAGCCGC
CGTGAGTTCCTGAAAGAACTGATTGGTCAGGCACCCCCACCCCGCGTGGGCTGGACTGAGCATTTCACCAGCCGCTTCGC
CGGTCAACCCTTCAAGTCGGTTGCCATCCACTTCACGGATTCACGCGGCCGCACTTTTCACCGGAAGGGGGAGTTCGTGG
CGACCGCAACGGGCGTCGAGGGCAGTCTCATCTATGCCGTCTCAAGCCTGCTGCGCGATGAGATTGCCATGCATGCCAGT
GCCACCTTCACGCTCGATCTGCTGCCGGACAAGTCGCCCGAGCAGGTCCTGGTTGAGGTGCGGCACCCGCGCGGCTCACG
CTCGCTTTCCAGCCATCTGAAAAGCCGCCTGAACCTTGATGGCATCAAGGCCGCCATTCTTTATGAATTGCTGGGCAAGG
ACGCCATCAACGACCCCATCCAGCTTGCCCACGCCATCAAGGCCTTGCCGGTGACGCTGCTGGCTCCCCGGCCGATCGAT
GAGGCCATCAGCAGCGCTGGTGGCGTGCCCTTCGAGGCGATGGATGCGCACATGCAACTTCGAGCATCAAAAGGTACAGC
CCAGCCCGTGTTTTGTGCCGGCGAAATGCTTGATTGGGAGGCGCCCACGGGTGGCTACCTGCTCACCGCCTGTTTTGCCA
GCGGGCATGCTGCCGGCCAAGGTGTCATCAATTATTTTGGCCTTTAG

Upstream 100 bases:

>100_bases
ACCCAAAAACCTCTGATACCGTGACTGCAGGTTTTGAGCCCACTTCTTGCAACGTACCCCAAACGTACCCCAACGTAGCC
ATTAGGCAGACGGAATTTCC

Downstream 100 bases:

>100_bases
TTCAAGCGGGACGGGTGGAAGAAGTGATTGATTTGGCAGAAAAATTTGACTGAAAATATTTTCAGCCGGCATTTGTAAAA
AAGGGAAAACCATGATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFLLAGKGGLNLTHSEEPPVFLG
RYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRVFPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEP
KGALKFSTPSSEMQVQADAVVLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR
REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVEGSLIYAVSSLLRDEIAMHAS
ATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLDGIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPID
EAISSAGGVPFEAMDAHMQLRASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL

Sequences:

>Translated_468_residues
MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFLLAGKGGLNLTHSEEPPVFLG
RYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRVFPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEP
KGALKFSTPSSEMQVQADAVVLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR
REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVEGSLIYAVSSLLRDEIAMHAS
ATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLDGIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPID
EAISSAGGVPFEAMDAHMQLRASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL
>Mature_468_residues
MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFLLAGKGGLNLTHSEEPPVFLG
RYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRVFPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEP
KGALKFSTPSSEMQVQADAVVLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR
REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVEGSLIYAVSSLLRDEIAMHAS
ATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLDGIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPID
EAISSAGGVPFEAMDAHMQLRASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49523; Mature: 49523

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFL
CCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHCCCEEE
LAGKGGLNLTHSEEPPVFLGRYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRV
EECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCC
FPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEPKGALKFSTPSSEMQVQADAV
CCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEE
VLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR
EEEECCCHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHH
REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVE
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCEEEEECCCC
GSLIYAVSSLLRDEIAMHASATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLD
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCC
GIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPIDEAISSAGGVPFEAMDAHMQL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCHHHHHHHHEE
RASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL
EECCCCCCCEEEECCEECCCCCCCCEEEEEHHHCCCCCCCCHHHHCCC
>Mature Secondary Structure
MNDSTLPVKSLQSTQHSPLRVAVIGGGPAGLMAAEVLAGAGAAVSVTVYDAMPSVGRKFL
CCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHCCCEEE
LAGKGGLNLTHSEEPPVFLGRYGERSGELQPLLAAFGPTQLRVWAGALGVETFVGSSGRV
EECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCC
FPKDMKAAPLLRAWLHRLRGAGVQFSMRHRWLGWTDDSEPKGALKFSTPSSEMQVQADAV
CCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEE
VLALGGASWARLGSDGAWVPILAERGIAIAPLKPSNCGFDVFAPLAALAAPGMLGSGESR
EEEECCCHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHH
REFLKELIGQAPPPRVGWTEHFTSRFAGQPFKSVAIHFTDSRGRTFHRKGEFVATATGVE
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCEEEEECCCC
GSLIYAVSSLLRDEIAMHASATFTLDLLPDKSPEQVLVEVRHPRGSRSLSSHLKSRLNLD
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCC
GIKAAILYELLGKDAINDPIQLAHAIKALPVTLLAPRPIDEAISSAGGVPFEAMDAHMQL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCHHHHHHHHEE
RASKGTAQPVFCAGEMLDWEAPTGGYLLTACFASGHAAGQGVINYFGL
EECCCCCCCEEEECCEECCCCCCCCEEEEEHHHCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA