Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is tyrC [H]
Identifier: 91787673
GI number: 91787673
Start: 1852672
End: 1853550
Strand: Reverse
Name: tyrC [H]
Synonym: Bpro_1791
Alternate gene names: 91787673
Gene position: 1853550-1852672 (Counterclockwise)
Preceding gene: 91787674
Following gene: 91787672
Centisome position: 35.64
GC content: 62.57
Gene sequence:
>879_bases ATGTTTGAACAGTTAGGTCTCATCGGATGCGGCCTCATGGGCGGTTCTTTCGCGCTCGCGCTCAAACAGGCCGGCCTGGT CAAGCGCATCGTCGGCTATAGCAAATCCCCCTCTACCACCGAGCGCGCCCGCCAGATGGGCGTGATCGACGTGGAAGCAC CCTCCGCCCTGCTCGCGGTCTCGGGCGCAGATATCGTGCTGCTGGCCGTCCCGGTTTCCGCCACCGAGGCCACCTTCAAG GCCATCCGGCATCTGGTGGGGCCCAGCACGCTGATCATGGACGTGGGCTCGACCAAACGGGATGTGGTGGATGCGGCGCG CCGCGTCCTGCGTGACAACGTCGGCGCCTTTGTTCCCTGCCACCCCATCACCGGCAAGGAAGTCTCCGGCGTCGAGCATG CGGACGCGGACCTGTACAGCGGCAAGCAGGTCATCCTGACGCCCATTGAGCGGACTTTCACCGTCCAGCTGCAAAAGGCC ACCGAGGTGTGGACTGCCCTGGGATGCCATGTGTTGAAGATGTCGCCGCAGGCCCATGATGCGGCCTACGCAGCGGTCAG CCACCTGCCCCACCTGATCGCTTTTGCCCTGATGAACGGCATCTCGGGCCAGCAGGAAGGCAAGGACTACCTGTCCCTGG CGGGACCCGGCTTTCGCGATTTCACGCGGATTGCGGCCAGCGACCCCAAAATGTGGCGCGACATCCTGATTGCCAACCGC GAAGAACTGCTGGCGCAGTCCAAAATCTTCCAGGACACCCTGCAATCACTGGAGCAGCTGATTTCCGGTGGCAGTGGTGA TGTGCTGGAGGTGCTGATCGAGCAAGCCAGCGAAACGCGCGCCAACTGGCGCATGTCCTCGCATAAATCCCATAAATAA
Upstream 100 bases:
>100_bases CTGTGCGCGTTTTACAAGGTTCTCGGCACCTACCCCGTCAGCGATTGAGGCGCAAGCAAGAGCTCCATGCAAGAATTACA AAAATTTCCGGTACCGCTTC
Downstream 100 bases:
>100_bases GTCCCGGTTCATGTTCGATATTGAGTACCTGGATATTCCGCCACTGGCCCGGGCGGGAGGAACAGTCCGACTGCCCGGCT CCAAAAGCATTTCCAACCGC
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAVSGADIVLLAVPVSATEATFK AIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPCHPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKA TEVWTALGCHVLKMSPQAHDAAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK
Sequences:
>Translated_292_residues MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAVSGADIVLLAVPVSATEATFK AIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPCHPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKA TEVWTALGCHVLKMSPQAHDAAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK >Mature_292_residues MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAVSGADIVLLAVPVSATEATFK AIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPCHPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKA TEVWTALGCHVLKMSPQAHDAAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 31399; Mature: 31399
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAV CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCCEEEEE SGADIVLLAVPVSATEATFKAIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPC CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEC HPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKATEVWTALGCHVLKMSPQAHD CCCCCCCCCCCCCCCCHHHCCCEEEEEECCCEEEEEHHHHHHHHHHHCCHHEEECCCHHH AAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCH EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAV CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCCEEEEE SGADIVLLAVPVSATEATFKAIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPC CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEC HPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKATEVWTALGCHVLKMSPQAHD CCCCCCCCCCCCCCCCHHHCCCEEEEEECCCEEEEEHHHHHHHHHHHCCHHEEECCCHHH AAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCH EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]