Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is tyrC [H]

Identifier: 91787673

GI number: 91787673

Start: 1852672

End: 1853550

Strand: Reverse

Name: tyrC [H]

Synonym: Bpro_1791

Alternate gene names: 91787673

Gene position: 1853550-1852672 (Counterclockwise)

Preceding gene: 91787674

Following gene: 91787672

Centisome position: 35.64

GC content: 62.57

Gene sequence:

>879_bases
ATGTTTGAACAGTTAGGTCTCATCGGATGCGGCCTCATGGGCGGTTCTTTCGCGCTCGCGCTCAAACAGGCCGGCCTGGT
CAAGCGCATCGTCGGCTATAGCAAATCCCCCTCTACCACCGAGCGCGCCCGCCAGATGGGCGTGATCGACGTGGAAGCAC
CCTCCGCCCTGCTCGCGGTCTCGGGCGCAGATATCGTGCTGCTGGCCGTCCCGGTTTCCGCCACCGAGGCCACCTTCAAG
GCCATCCGGCATCTGGTGGGGCCCAGCACGCTGATCATGGACGTGGGCTCGACCAAACGGGATGTGGTGGATGCGGCGCG
CCGCGTCCTGCGTGACAACGTCGGCGCCTTTGTTCCCTGCCACCCCATCACCGGCAAGGAAGTCTCCGGCGTCGAGCATG
CGGACGCGGACCTGTACAGCGGCAAGCAGGTCATCCTGACGCCCATTGAGCGGACTTTCACCGTCCAGCTGCAAAAGGCC
ACCGAGGTGTGGACTGCCCTGGGATGCCATGTGTTGAAGATGTCGCCGCAGGCCCATGATGCGGCCTACGCAGCGGTCAG
CCACCTGCCCCACCTGATCGCTTTTGCCCTGATGAACGGCATCTCGGGCCAGCAGGAAGGCAAGGACTACCTGTCCCTGG
CGGGACCCGGCTTTCGCGATTTCACGCGGATTGCGGCCAGCGACCCCAAAATGTGGCGCGACATCCTGATTGCCAACCGC
GAAGAACTGCTGGCGCAGTCCAAAATCTTCCAGGACACCCTGCAATCACTGGAGCAGCTGATTTCCGGTGGCAGTGGTGA
TGTGCTGGAGGTGCTGATCGAGCAAGCCAGCGAAACGCGCGCCAACTGGCGCATGTCCTCGCATAAATCCCATAAATAA

Upstream 100 bases:

>100_bases
CTGTGCGCGTTTTACAAGGTTCTCGGCACCTACCCCGTCAGCGATTGAGGCGCAAGCAAGAGCTCCATGCAAGAATTACA
AAAATTTCCGGTACCGCTTC

Downstream 100 bases:

>100_bases
GTCCCGGTTCATGTTCGATATTGAGTACCTGGATATTCCGCCACTGGCCCGGGCGGGAGGAACAGTCCGACTGCCCGGCT
CCAAAAGCATTTCCAACCGC

Product: prephenate dehydrogenase

Products: NA

Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAVSGADIVLLAVPVSATEATFK
AIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPCHPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKA
TEVWTALGCHVLKMSPQAHDAAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR
EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK

Sequences:

>Translated_292_residues
MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAVSGADIVLLAVPVSATEATFK
AIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPCHPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKA
TEVWTALGCHVLKMSPQAHDAAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR
EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK
>Mature_292_residues
MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAVSGADIVLLAVPVSATEATFK
AIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPCHPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKA
TEVWTALGCHVLKMSPQAHDAAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR
EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK

Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF02153 PDH [H]

EC number: =1.3.1.43; =1.3.1.12 [H]

Molecular weight: Translated: 31399; Mature: 31399

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAV
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCCEEEEE
SGADIVLLAVPVSATEATFKAIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPC
CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEC
HPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKATEVWTALGCHVLKMSPQAHD
CCCCCCCCCCCCCCCCHHHCCCEEEEEECCCEEEEEHHHHHHHHHHHCCHHEEECCCHHH
AAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCH
EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFEQLGLIGCGLMGGSFALALKQAGLVKRIVGYSKSPSTTERARQMGVIDVEAPSALLAV
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCCEEEEE
SGADIVLLAVPVSATEATFKAIRHLVGPSTLIMDVGSTKRDVVDAARRVLRDNVGAFVPC
CCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEC
HPITGKEVSGVEHADADLYSGKQVILTPIERTFTVQLQKATEVWTALGCHVLKMSPQAHD
CCCCCCCCCCCCCCCCHHHCCCEEEEEECCCEEEEEHHHHHHHHHHHCCHHEEECCCHHH
AAYAAVSHLPHLIAFALMNGISGQQEGKDYLSLAGPGFRDFTRIAASDPKMWRDILIANR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCH
EELLAQSKIFQDTLQSLEQLISGGSGDVLEVLIEQASETRANWRMSSHKSHK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7916685 [H]