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The map label for this gene is rfaC [H]

Identifier: 91787522

GI number: 91787522

Start: 1695528

End: 1696610

Strand: Direct

Name: rfaC [H]

Synonym: Bpro_1640

Alternate gene names: 91787522

Gene position: 1695528-1696610 (Clockwise)

Preceding gene: 91787521

Following gene: 91787523

Centisome position: 32.6

GC content: 68.14

Gene sequence:

>1083_bases
GTGAAAATCCTGTTAGTCAAGCTGTCGTCGCTGGGTGACGTAGTCCACACCTTGCCCGTGGTGCAGGACATCCGTGCTGC
CTTGCCCGACGCGCAGATTGACTGGGTGGTCGAAAAATCATTTGCCCCCTTGCTGGCGCGTTGCGCGGGCCTGCGCCGCG
TCATCCCGTGCGAGATCAGGCGCTGGCGCAAGTCGCCCCTGGCGGCGCTCACGCGCGCAGAGTGGAGTGCCTTCAAGGCA
CAGCTGCGGCAGGAAAGTTACGACGCCGTCATCGATCTGCAGGGCCTTACCAAGTCCGCGCTGGTGGCGCGGCTGGCCCG
GCTGGCCAGCCCCGGCGGCAAGCGCTATGCGCTGGCCAACCAGACCGATGGCTCGGGCTATGAGGCGCCGACGCGCTGGG
TGGCCGACGTGGCGATCCACATCGCGCCGCAGACCGCTGCCGTGCAGCGCTCCCGCCAGTTGGCGGCGCAGGCGCTGGGC
TACGACCTGCGGGCCGAACCAGACTTTGGATTGAGGCTGCCTCCAGCCCGAGAAAGAAACGGGAAGAGTGCTCCTGAAGA
GATAGCAAGCCCGGCGGGCCTGGAACGGGTGGCCTTTGTGCACGGCACCTCGCGCGCCGACAAGGAATGGCCGCTGGACC
ACTGGATAGAGCTCGGCCAGCGCCTGGTCGCGGGGGGCTGCCAGCTGGCCTTGCCGCACGGCAATGCAAAGGAACTGGCA
ACGAGCCGGGCCATTGCAGAGGCGCTCAACGAACCGGGAAGCCCTGTGGTGGCCACCGTGTGGCCCCTGCTGTCGCTCGA
TGCCCTGACGGACGAGCTGGCGCGCTGCGCCGGCGTGATCGGTGTGGACAGCGGCGTGAGCCACATTGCCGTGGCGCTCG
ATTTGCCGCATGTGCAGATCTACAACTTCGATACCGCGTGGCGAACCGGGCCACCGGCGCCTGCGGATGCCGGCGCGCCC
GCGCGGCGGCAGGTCAGCGTGTTTGCGCAACCCACCCCCAGCGTTGATGTCGTGTGGCAGGCCTGGCTGGCTTGCCGGCA
GGCCCCTGCGGCGGCGCATACGACCATTGTGGCCGCCCCATGA

Upstream 100 bases:

>100_bases
TGGTGCCCCCACGCTCGTCACTTCGTGTACTTCGCTGCCCCCTCAAGGGGCTGGCCTTGCTTGGGGCGGCCCGGCGCGGC
GGCCTGCCGGCTGGCGCGCT

Downstream 100 bases:

>100_bases
GCCAGCTGTTGCTGCGGCTTTATTCGCTGGCCATGGTGCTGGCGCAACCCATGCTGCGTCGCAAGCTGGCGCGGCGCGGC
CAGCGCGAGCCCGGCTATCT

Product: lipopolysaccharide heptosyltransferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKILLVKLSSLGDVVHTLPVVQDIRAALPDAQIDWVVEKSFAPLLARCAGLRRVIPCEIRRWRKSPLAALTRAEWSAFKA
QLRQESYDAVIDLQGLTKSALVARLARLASPGGKRYALANQTDGSGYEAPTRWVADVAIHIAPQTAAVQRSRQLAAQALG
YDLRAEPDFGLRLPPARERNGKSAPEEIASPAGLERVAFVHGTSRADKEWPLDHWIELGQRLVAGGCQLALPHGNAKELA
TSRAIAEALNEPGSPVVATVWPLLSLDALTDELARCAGVIGVDSGVSHIAVALDLPHVQIYNFDTAWRTGPPAPADAGAP
ARRQVSVFAQPTPSVDVVWQAWLACRQAPAAAHTTIVAAP

Sequences:

>Translated_360_residues
MKILLVKLSSLGDVVHTLPVVQDIRAALPDAQIDWVVEKSFAPLLARCAGLRRVIPCEIRRWRKSPLAALTRAEWSAFKA
QLRQESYDAVIDLQGLTKSALVARLARLASPGGKRYALANQTDGSGYEAPTRWVADVAIHIAPQTAAVQRSRQLAAQALG
YDLRAEPDFGLRLPPARERNGKSAPEEIASPAGLERVAFVHGTSRADKEWPLDHWIELGQRLVAGGCQLALPHGNAKELA
TSRAIAEALNEPGSPVVATVWPLLSLDALTDELARCAGVIGVDSGVSHIAVALDLPHVQIYNFDTAWRTGPPAPADAGAP
ARRQVSVFAQPTPSVDVVWQAWLACRQAPAAAHTTIVAAP
>Mature_360_residues
MKILLVKLSSLGDVVHTLPVVQDIRAALPDAQIDWVVEKSFAPLLARCAGLRRVIPCEIRRWRKSPLAALTRAEWSAFKA
QLRQESYDAVIDLQGLTKSALVARLARLASPGGKRYALANQTDGSGYEAPTRWVADVAIHIAPQTAAVQRSRQLAAQALG
YDLRAEPDFGLRLPPARERNGKSAPEEIASPAGLERVAFVHGTSRADKEWPLDHWIELGQRLVAGGCQLALPHGNAKELA
TSRAIAEALNEPGSPVVATVWPLLSLDALTDELARCAGVIGVDSGVSHIAVALDLPHVQIYNFDTAWRTGPPAPADAGAP
ARRQVSVFAQPTPSVDVVWQAWLACRQAPAAAHTTIVAAP

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=327, Percent_Identity=37.0030581039755, Blast_Score=185, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 38607; Mature: 38607

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLVKLSSLGDVVHTLPVVQDIRAALPDAQIDWVVEKSFAPLLARCAGLRRVIPCEIR
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHH
RWRKSPLAALTRAEWSAFKAQLRQESYDAVIDLQGLTKSALVARLARLASPGGKRYALAN
HHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECC
QTDGSGYEAPTRWVADVAIHIAPQTAAVQRSRQLAAQALGYDLRAEPDFGLRLPPARERN
CCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GKSAPEEIASPAGLERVAFVHGTSRADKEWPLDHWIELGQRLVAGGCQLALPHGNAKELA
CCCCCHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHH
TSRAIAEALNEPGSPVVATVWPLLSLDALTDELARCAGVIGVDSGVSHIAVALDLPHVQI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEE
YNFDTAWRTGPPAPADAGAPARRQVSVFAQPTPSVDVVWQAWLACRQAPAAAHTTIVAAP
EECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MKILLVKLSSLGDVVHTLPVVQDIRAALPDAQIDWVVEKSFAPLLARCAGLRRVIPCEIR
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHH
RWRKSPLAALTRAEWSAFKAQLRQESYDAVIDLQGLTKSALVARLARLASPGGKRYALAN
HHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECC
QTDGSGYEAPTRWVADVAIHIAPQTAAVQRSRQLAAQALGYDLRAEPDFGLRLPPARERN
CCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GKSAPEEIASPAGLERVAFVHGTSRADKEWPLDHWIELGQRLVAGGCQLALPHGNAKELA
CCCCCHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHH
TSRAIAEALNEPGSPVVATVWPLLSLDALTDELARCAGVIGVDSGVSHIAVALDLPHVQI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEE
YNFDTAWRTGPPAPADAGAPARRQVSVFAQPTPSVDVVWQAWLACRQAPAAAHTTIVAAP
EECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478319; 8041620; 9278503; 1624462 [H]