Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787274
Identifier: 91787274
GI number: 91787274
Start: 1417368
End: 1418525
Strand: Direct
Name: 91787274
Synonym: Bpro_1379
Alternate gene names: NA
Gene position: 1417368-1418525 (Clockwise)
Preceding gene: 91787272
Following gene: 91787275
Centisome position: 27.26
GC content: 61.05
Gene sequence:
>1158_bases GTGATCGGGCTGGAGGGAGTTTCCGCTCAGGAGCTGTCCGACCTGATAGGGGCGATCTATGACTGTGCGCTCGATCCGCA GCGCTGGCCGGCCACTTGCCGAAAGGTTGCAGATCTCTGTGAAAGCACAGCGGGCGGAATATGCGTTCATGATCTGCGGC ACGTGCAAAATGACCAGCTGTTCGTCTTCGGGTATCAGCCAGAATTTCTGGGGAAGTTGGGAAGTCACTACGCGGAAAGT CCCATGGCCGCTGCGGATGTCGTCTCGGATATCGGCGACGTCAGCGCCCTCTCCATGGAGCGTTACCAGCTGCTCGAAAG CCGGTTCTTTCGAGAGGTGCTAAAGCCGTTTGGACTGCTGGACATGATCTGGTTTCCCGCGTTGCGGACCGGAGGGCGCA TGGCTTCCATGCATGCCTCCCGGAGCGAGACGGCCCCGCATTTTCAGCAGCGTGATGTCAGTCTGTTCAAGCTTCTTTCT CCGCATGTATGCCGAGCACTCGCCATCTCCGATGTGCTCGATATCAGGGCGCTCAGGTCGGAGATGCTCGAAAAAACGCT GGATGGACTTGTTGCCGGTGTTTTCCTCACGGCGCGCGATGGTCACGTCGTTTACATGAACCAGGCTGCCGAGCGCCAGA TCAAAACCGGCAATTCGATTCGTCTCGTCAACAATCGGCTTTCTCCCACCGATTCCGCGGCGCGCGCTGCACTGTCGAAG GCGATTGAAGAGGCGGCGCGCGACGACGCCGAAATGGGTATGAGCAAACATTCCGTGGCGATTCCAGACAGCCTCGGCGG CGGCTACGTTGCGACCCTCCTGCCGATTGAGAGCGGTCAGCGCCGCGGCATTCTTGCACCGTTTGCCGCATCGGTCGCAG TGTTCACGCAGGATCCCGTTCAGGCGCCACTCATGCCGGGTGAGGCCTTCGCCAGGCTGCATGGGCTCACCGGCGGCGAA CTGCGCGTGCTGCTGGCGCTTTCCCAGGGGCTGGGCGGCATGGAGGTGGCCGACATGCTCGGCATCGGCGAGTCGACTAT TCGCACCCACCTGCAGCACATGTTCTCCAAGACCGGCACGTCCAGGCAGGCCGACCTCCTGCGCCTGTTGCATAACTCGG CGCCGCCGATTCGTACCCTGTCAACGACTGCCCATTGA
Upstream 100 bases:
>100_bases CCTCAGGTTCACGGCCCAAGAGAGGTCACCCGGTTCGATAGGAAAAGGAAAAGGTTAAGGGCATGGCTTCTCGACATTCT TCGGATAGCAAGGTTTTACC
Downstream 100 bases:
>100_bases GTCCAGAGAGTCCAGGGAGGCTGACCTCAATGGGCTGCACAGTCGACCTGCGGCCCGGTTCAAGGCGACGTTACTTTCTT CCGAGATATCATCAAGTCAA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Regulatory Protein LuxR; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator; LuxR Family Regulatory Protein; Two-Component Response Regulator Protein; Transcriptionat Regulator LuxR Family
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MIGLEGVSAQELSDLIGAIYDCALDPQRWPATCRKVADLCESTAGGICVHDLRHVQNDQLFVFGYQPEFLGKLGSHYAES PMAAADVVSDIGDVSALSMERYQLLESRFFREVLKPFGLLDMIWFPALRTGGRMASMHASRSETAPHFQQRDVSLFKLLS PHVCRALAISDVLDIRALRSEMLEKTLDGLVAGVFLTARDGHVVYMNQAAERQIKTGNSIRLVNNRLSPTDSAARAALSK AIEEAARDDAEMGMSKHSVAIPDSLGGGYVATLLPIESGQRRGILAPFAASVAVFTQDPVQAPLMPGEAFARLHGLTGGE LRVLLALSQGLGGMEVADMLGIGESTIRTHLQHMFSKTGTSRQADLLRLLHNSAPPIRTLSTTAH
Sequences:
>Translated_385_residues MIGLEGVSAQELSDLIGAIYDCALDPQRWPATCRKVADLCESTAGGICVHDLRHVQNDQLFVFGYQPEFLGKLGSHYAES PMAAADVVSDIGDVSALSMERYQLLESRFFREVLKPFGLLDMIWFPALRTGGRMASMHASRSETAPHFQQRDVSLFKLLS PHVCRALAISDVLDIRALRSEMLEKTLDGLVAGVFLTARDGHVVYMNQAAERQIKTGNSIRLVNNRLSPTDSAARAALSK AIEEAARDDAEMGMSKHSVAIPDSLGGGYVATLLPIESGQRRGILAPFAASVAVFTQDPVQAPLMPGEAFARLHGLTGGE LRVLLALSQGLGGMEVADMLGIGESTIRTHLQHMFSKTGTSRQADLLRLLHNSAPPIRTLSTTAH >Mature_385_residues MIGLEGVSAQELSDLIGAIYDCALDPQRWPATCRKVADLCESTAGGICVHDLRHVQNDQLFVFGYQPEFLGKLGSHYAES PMAAADVVSDIGDVSALSMERYQLLESRFFREVLKPFGLLDMIWFPALRTGGRMASMHASRSETAPHFQQRDVSLFKLLS PHVCRALAISDVLDIRALRSEMLEKTLDGLVAGVFLTARDGHVVYMNQAAERQIKTGNSIRLVNNRLSPTDSAARAALSK AIEEAARDDAEMGMSKHSVAIPDSLGGGYVATLLPIESGQRRGILAPFAASVAVFTQDPVQAPLMPGEAFARLHGLTGGE LRVLLALSQGLGGMEVADMLGIGESTIRTHLQHMFSKTGTSRQADLLRLLHNSAPPIRTLSTTAH
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41643; Mature: 41643
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLEGVSAQELSDLIGAIYDCALDPQRWPATCRKVADLCESTAGGICVHDLRHVQNDQL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCE FVFGYQPEFLGKLGSHYAESPMAAADVVSDIGDVSALSMERYQLLESRFFREVLKPFGLL EEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMIWFPALRTGGRMASMHASRSETAPHFQQRDVSLFKLLSPHVCRALAISDVLDIRALRS HHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMLEKTLDGLVAGVFLTARDGHVVYMNQAAERQIKTGNSIRLVNNRLSPTDSAARAALSK HHHHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH AIEEAARDDAEMGMSKHSVAIPDSLGGGYVATLLPIESGQRRGILAPFAASVAVFTQDPV HHHHHHCCHHHHCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHEEEECCCC QAPLMPGEAFARLHGLTGGELRVLLALSQGLGGMEVADMLGIGESTIRTHLQHMFSKTGT CCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC SRQADLLRLLHNSAPPIRTLSTTAH CHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIGLEGVSAQELSDLIGAIYDCALDPQRWPATCRKVADLCESTAGGICVHDLRHVQNDQL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCE FVFGYQPEFLGKLGSHYAESPMAAADVVSDIGDVSALSMERYQLLESRFFREVLKPFGLL EEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMIWFPALRTGGRMASMHASRSETAPHFQQRDVSLFKLLSPHVCRALAISDVLDIRALRS HHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMLEKTLDGLVAGVFLTARDGHVVYMNQAAERQIKTGNSIRLVNNRLSPTDSAARAALSK HHHHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHH AIEEAARDDAEMGMSKHSVAIPDSLGGGYVATLLPIESGQRRGILAPFAASVAVFTQDPV HHHHHHCCHHHHCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHEEEECCCC QAPLMPGEAFARLHGLTGGELRVLLALSQGLGGMEVADMLGIGESTIRTHLQHMFSKTGT CCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC SRQADLLRLLHNSAPPIRTLSTTAH CHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA