Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787257
Identifier: 91787257
GI number: 91787257
Start: 1403130
End: 1404134
Strand: Direct
Name: 91787257
Synonym: Bpro_1362
Alternate gene names: NA
Gene position: 1403130-1404134 (Clockwise)
Preceding gene: 91787255
Following gene: 91787260
Centisome position: 26.98
GC content: 63.98
Gene sequence:
>1005_bases ATGCCACGCCGAAACCCGCAACCTGACAGCATTGAATCCATGGAACAAATTATCCAGTGGCTGGAGCAATACGGCCTGGC CGCCGTCTTCCTGAACATCGTTCTGGAGCAGCTCGGCCTGCCCATTCCGGCCTATCCGGTGCTCATCCTGACGGGGGCAC TGAGTGTTAACGGCCAGTACTCGGCAGGTGGCCTGCTTTTCATCGCCGTGCTGGCCTGCCTGATCGCCGACAGCGTCTGG TACTGGGCCGGCCACCACTTCGGCGGCCGTGTCCTGAAAACCCTGTGCCGCATTTCCCTCTCACCCGACTCCTGCGTGCG GCAGACCGAGTCAATCTTCACGCGCTGGGGTGCCAAGTCGCTCATCCTGGCCAAGTTTATTCCGGGCTTTGCCTCGCTCG CCACGGCATTGGCCGGCAGAACCGGCGTGCCCTTTGGCCGCTTCGTTTTCTTTGACGCGATCGGCTCCGTCCTGTACGCC AGCGGCGGGCTGGCCATTGGCCTGGTGTTTCACGATGCGGTGGCCGATGTACTGCTGGTCTTCGAGCAACTGGGGCGCAT CGGGGTAGTGGTGCTGCTGATTTGCTTCGGCCTGTTTCTGGCGCACAAATGGTGGCAGCGCCAGCGCCTGTACCGGCAGC TGCGCATGGCCCGCATTTCGCCCCATCAGTTGCAGCAGTGGACACAGGACAACAAGCCCACCGTGATCCTGGATGTACGC ACGGAGCTGAGCCGTGCCGGCGGCGGCATCATTCCCGGCGCGCTGGTCTGGTCGGACCTGGACCGCAAGATGGCCTCGCT CGATCTGCCCCACGATGCGCATGTGGTGGTTTACTGCGCCTGCCCCAACGATGCGTCTGCCGCCCAGGTCGCCAAGCGCC TGATGGCCGCGGGTTTCAGCAATGTGCGCCCGCTACACGGCGGCATCGATGCCTGGGAGGCGGCGGGATTTCCGCTGGAG TACCCCAGCCGGCTTGAGCCCGTCGACGCGGTGAGGACGAGTTGA
Upstream 100 bases:
>100_bases CGCGTCCAGGCCGTCTACAGTCCGTTTTGGGGGATTTTTATGGGGCTTTATGCTCTTATGTCCTTATGTATCCTGATGGA CGCCTGCGGTGTGGCCCGCA
Downstream 100 bases:
>100_bases GGCCGTGAAGTCTTGAATGTGAACTTGAACGTGAACGGGAGCGGGAGCGGGAACTTGAACGGGCAGACCCTACTGGGGCT TTCTGCCGTTCAGTGCGCTT
Product: rhodanese-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPRRNPQPDSIESMEQIIQWLEQYGLAAVFLNIVLEQLGLPIPAYPVLILTGALSVNGQYSAGGLLFIAVLACLIADSVW YWAGHHFGGRVLKTLCRISLSPDSCVRQTESIFTRWGAKSLILAKFIPGFASLATALAGRTGVPFGRFVFFDAIGSVLYA SGGLAIGLVFHDAVADVLLVFEQLGRIGVVVLLICFGLFLAHKWWQRQRLYRQLRMARISPHQLQQWTQDNKPTVILDVR TELSRAGGGIIPGALVWSDLDRKMASLDLPHDAHVVVYCACPNDASAAQVAKRLMAAGFSNVRPLHGGIDAWEAAGFPLE YPSRLEPVDAVRTS
Sequences:
>Translated_334_residues MPRRNPQPDSIESMEQIIQWLEQYGLAAVFLNIVLEQLGLPIPAYPVLILTGALSVNGQYSAGGLLFIAVLACLIADSVW YWAGHHFGGRVLKTLCRISLSPDSCVRQTESIFTRWGAKSLILAKFIPGFASLATALAGRTGVPFGRFVFFDAIGSVLYA SGGLAIGLVFHDAVADVLLVFEQLGRIGVVVLLICFGLFLAHKWWQRQRLYRQLRMARISPHQLQQWTQDNKPTVILDVR TELSRAGGGIIPGALVWSDLDRKMASLDLPHDAHVVVYCACPNDASAAQVAKRLMAAGFSNVRPLHGGIDAWEAAGFPLE YPSRLEPVDAVRTS >Mature_333_residues PRRNPQPDSIESMEQIIQWLEQYGLAAVFLNIVLEQLGLPIPAYPVLILTGALSVNGQYSAGGLLFIAVLACLIADSVWY WAGHHFGGRVLKTLCRISLSPDSCVRQTESIFTRWGAKSLILAKFIPGFASLATALAGRTGVPFGRFVFFDAIGSVLYAS GGLAIGLVFHDAVADVLLVFEQLGRIGVVVLLICFGLFLAHKWWQRQRLYRQLRMARISPHQLQQWTQDNKPTVILDVRT ELSRAGGGIIPGALVWSDLDRKMASLDLPHDAHVVVYCACPNDASAAQVAKRLMAAGFSNVRPLHGGIDAWEAAGFPLEY PSRLEPVDAVRTS
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dedA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015414 [H]
Pfam domain/function: PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 36546; Mature: 36415
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRNPQPDSIESMEQIIQWLEQYGLAAVFLNIVLEQLGLPIPAYPVLILTGALSVNGQY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC SAGGLLFIAVLACLIADSVWYWAGHHFGGRVLKTLCRISLSPDSCVRQTESIFTRWGAKS CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHH LILAKFIPGFASLATALAGRTGVPFGRFVFFDAIGSVLYASGGLAIGLVFHDAVADVLLV HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH FEQLGRIGVVVLLICFGLFLAHKWWQRQRLYRQLRMARISPHQLQQWTQDNKPTVILDVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEH TELSRAGGGIIPGALVWSDLDRKMASLDLPHDAHVVVYCACPNDASAAQVAKRLMAAGFS HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC NVRPLHGGIDAWEAAGFPLEYPSRLEPVDAVRTS CCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure PRRNPQPDSIESMEQIIQWLEQYGLAAVFLNIVLEQLGLPIPAYPVLILTGALSVNGQY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC SAGGLLFIAVLACLIADSVWYWAGHHFGGRVLKTLCRISLSPDSCVRQTESIFTRWGAKS CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHH LILAKFIPGFASLATALAGRTGVPFGRFVFFDAIGSVLYASGGLAIGLVFHDAVADVLLV HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH FEQLGRIGVVVLLICFGLFLAHKWWQRQRLYRQLRMARISPHQLQQWTQDNKPTVILDVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEH TELSRAGGGIIPGALVWSDLDRKMASLDLPHDAHVVVYCACPNDASAAQVAKRLMAAGFS HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC NVRPLHGGIDAWEAAGFPLEYPSRLEPVDAVRTS CCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]