Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787224
Identifier: 91787224
GI number: 91787224
Start: 1366469
End: 1367191
Strand: Direct
Name: 91787224
Synonym: Bpro_1328
Alternate gene names: NA
Gene position: 1366469-1367191 (Clockwise)
Preceding gene: 91787223
Following gene: 91787225
Centisome position: 26.28
GC content: 66.67
Gene sequence:
>723_bases TTGGTTACGGCTTTACTCGTGTACGCGCCGGCGGCCTGGCTGGCCGCGGCCGTGTCCGGGGCCACATTGGGGCGGGTTGA ATTGATCGAGGCGCGCGGTACGGTCTGGACCGGCTCGGCAAGGCTGCTGCTGACGGGGGGTGCCGGCAGTCGTGACAGCG CTATCCTGCCGGGGCGTGTGGACTGGCATCTGCGTCCCGGCTTGCTGGCCCTGAACCTGCAAGTGACCGCCGACTGCTGC ACGCCCACGCCGCTGCGGGGGCGACTGGCCCCGCGCCGGGGCGGGGTGATCCTGCAGGTGGCCGATGGCGCAACGCAATG GCCGGCGGCCATCCTGGCGGGGTTGGGTACCCCCTGGAACACAGTGCAGGCCGAGGGCAGCCTGCGGCTCGTAACGCAAA ACCTTTCCCTGGAATGGACCGGGGGCCGGACGGTGGTGTCGGGACGCGCCGAGTTGACGGCGCTGAGCCTGTCGTCGCGC CTGTCTACCCTCAAACCCATGGGGAGTTACCGTATGACTCTCATCGGAGGCAACACAACCTCACTGGAACTTGCTACGCT CGAGGGAAGCCTGCAATTAAGTGGCAGTGGGCGCTGGGTGGGTTCACATCTGCGTTTTGAGGGGGTGGCCAGCGCCCAGC CTGAGCATGAAGCGGCACTGGCCAACCTGCTGAACATCATCGGGCGCCGTGACGGCAGTCGTTCCATCATTACCTGGGGT TAA
Upstream 100 bases:
>100_bases ACCAAGTCTGAATCCCACCGTGTTGCGCCCCCGAGCCTCCTCCCGCCATCCTGCCGAAGTTGCACCATGGCGTTGGGCGC TTTCGGGAGCTTTGATCGGG
Downstream 100 bases:
>100_bases GAAGTATGACAAACATCCAGACCCAAGCCCATGTGCTCTCAACCCTGGCCACATTGCCCAGGTTTCCGATTGCTGTCGTT TCGATAGCGGTTTGTGTTCT
Product: putative general secretory pathway N transmembrane protein
Products: NA
Alternate protein names: General Secretory Pathway Protein N; Type II Secretion System Protein N; General Secretion Pathway Protein N
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MVTALLVYAPAAWLAAAVSGATLGRVELIEARGTVWTGSARLLLTGGAGSRDSAILPGRVDWHLRPGLLALNLQVTADCC TPTPLRGRLAPRRGGVILQVADGATQWPAAILAGLGTPWNTVQAEGSLRLVTQNLSLEWTGGRTVVSGRAELTALSLSSR LSTLKPMGSYRMTLIGGNTTSLELATLEGSLQLSGSGRWVGSHLRFEGVASAQPEHEAALANLLNIIGRRDGSRSIITWG
Sequences:
>Translated_240_residues MVTALLVYAPAAWLAAAVSGATLGRVELIEARGTVWTGSARLLLTGGAGSRDSAILPGRVDWHLRPGLLALNLQVTADCC TPTPLRGRLAPRRGGVILQVADGATQWPAAILAGLGTPWNTVQAEGSLRLVTQNLSLEWTGGRTVVSGRAELTALSLSSR LSTLKPMGSYRMTLIGGNTTSLELATLEGSLQLSGSGRWVGSHLRFEGVASAQPEHEAALANLLNIIGRRDGSRSIITWG >Mature_240_residues MVTALLVYAPAAWLAAAVSGATLGRVELIEARGTVWTGSARLLLTGGAGSRDSAILPGRVDWHLRPGLLALNLQVTADCC TPTPLRGRLAPRRGGVILQVADGATQWPAAILAGLGTPWNTVQAEGSLRLVTQNLSLEWTGGRTVVSGRAELTALSLSSR LSTLKPMGSYRMTLIGGNTTSLELATLEGSLQLSGSGRWVGSHLRFEGVASAQPEHEAALANLLNIIGRRDGSRSIITWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25107; Mature: 25107
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTALLVYAPAAWLAAAVSGATLGRVELIEARGTVWTGSARLLLTGGAGSRDSAILPGRV CEEEEEEECCHHHHHHHHCCCCCCEEEEEEECCEEEECCEEEEEECCCCCCCCEECCCCE DWHLRPGLLALNLQVTADCCTPTPLRGRLAPRRGGVILQVADGATQWPAAILAGLGTPWN EEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCC TVQAEGSLRLVTQNLSLEWTGGRTVVSGRAELTALSLSSRLSTLKPMGSYRMTLIGGNTT EEECCCCEEEEEECCEEEECCCEEEEECCCEEEEEEHHHHHHHCCCCCCEEEEEEECCCC SLELATLEGSLQLSGSGRWVGSHLRFEGVASAQPEHEAALANLLNIIGRRDGSRSIITWG EEEEEEEECEEEECCCCCEEECEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MVTALLVYAPAAWLAAAVSGATLGRVELIEARGTVWTGSARLLLTGGAGSRDSAILPGRV CEEEEEEECCHHHHHHHHCCCCCCEEEEEEECCEEEECCEEEEEECCCCCCCCEECCCCE DWHLRPGLLALNLQVTADCCTPTPLRGRLAPRRGGVILQVADGATQWPAAILAGLGTPWN EEEECCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCC TVQAEGSLRLVTQNLSLEWTGGRTVVSGRAELTALSLSSRLSTLKPMGSYRMTLIGGNTT EEECCCCEEEEEECCEEEECCCEEEEECCCEEEEEEHHHHHHHCCCCCCEEEEEEECCCC SLELATLEGSLQLSGSGRWVGSHLRFEGVASAQPEHEAALANLLNIIGRRDGSRSIITWG EEEEEEEECEEEECCCCCEEECEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA