Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787176
Identifier: 91787176
GI number: 91787176
Start: 1322470
End: 1323855
Strand: Direct
Name: 91787176
Synonym: Bpro_1280
Alternate gene names: NA
Gene position: 1322470-1323855 (Clockwise)
Preceding gene: 91787175
Following gene: 91787177
Centisome position: 25.43
GC content: 66.38
Gene sequence:
>1386_bases ATGACCATCGTCATTCCCATTCCAGACAAGGCTGCCAGAAACAGGGTCCGCCGCACCCTTTTATCGGGGGCCGCAGGCTT GCTGGCGCTATGCCTCCAGTCGGGCGTGCTGGCCGCCATTCCCGTGCAGCACTGGACCCAGCCCAGCGGGGCCCGGGTCT ACCTGTTGGAGAGCCCGGCCATTGCCATGCTGGATGTGCAGATTGATTTCGATGCCGGCAGCCGGCGCGACCCGCCTGAC AAGGCGGGGTTGGCCGGCGTCACGGCAGGCATGCTCGACAAGGGCGTACGCGGGAGCATTGGCGAGCCGGCTATGGACGA AAACGCGCTGAGCGAAGCCTGGGCTGATCTGGGCGCGCAATTTGGCGCGGGCGCCAGCTCGGACCGCATGGGATTTTCAC TGCGCTCGCTGACCGAGCCTGGGCTGCTGGACAAGGCCGTGGCGCTGGCTGCGCGCCAAATTGCCGAGCCATCTTTCCCC GAGGCGATCTGGCAGCGTGAACGCCAGCGCATGCAGGCCGGGCTCAAGGAGTCCTACACCCGCCCCGCCAGTGTGATTGG CCGCGCCTATGCCCAGGCGGTGTATGGCAACCACCCCTATGGCTACCAGGTGACGGAAGCCAGCCTGGCCCGCATCAGCG TGGCTGACATGCGGGCGGCCCACGCGGCCGGCGTGGTGGCCTGTCGTGCGCGCATCAGCATGGTGGGCGCCGTCACGCGC GCGCAGGCCGATGCCATTGCCGCGCGCCTGCTGTCGCGCCTGCCGCAAGTGCCCTGCGCCAGCCTGCCGCCCGCGCCGAT GGTGGCCGAGGTGGCGCCGCTGGCCGAGGCACAGGAAAAGCGCATTCCCTTCGATTCGGCGCAGGCCCATGTGCTGATCG GCCAGCCCGGCTTCAAGCGGGCCGACCCGGACTATTTCGCGTTGACCGTGGGCAATTACATTCTCGGCGGTGGCGGCTTT GTGTCGCGCCTGTCCAGCGAGGTGCGGGAAAAGCGCGGCCTGACCTACGGCGTCTCCAGCTACTTCTCGCCCGGCCTGCA TGCCGGCAGTTTCACCGTGGGCCTGCAAACCCGGCCCGATCAGGCCGCGCAGGCCGTGCAAATCGTGCGCCAGGTGGTGA ATGACTTCGTGGCCAACGGGCCTACCGAGGCCGAACTTCAGGCCGCCAAGGCCAACCTGATCGGCGGTTTTGCGCTGCGC ATCGACAGCAACCGAAAATTGCTCGACAACATTGCCGCTATCGCCTGGAACAACCTGCCGCTCGATTACCTGGATACCTG GACGCAGCAGATCGACAAGGTCACCCGGGCGGAGATCAAGGCGGCATTTGCCCGCAAATTACAACCCGACAAGATGATTA CCGTGATTCTGGGAGCCGCGCCATGA
Upstream 100 bases:
>100_bases AGCCCGTGGACCCGAACTCCCGGCGCCGCCAGCCGCGCGCCGCGGCTGCCGGCACCCGGCATTGAGCCTGGCCGCGAACC GACATGAAACGATTTTTGCC
Downstream 100 bases:
>100_bases AATACACCGCACTGGCAACTGAAAAGAAAACAGACAAGAAAGCGGAAAAAAAACCTGTCAGGTCGGGCAAGGTGGTAGCG CGTAAAGCCAAACCTCCTGG
Product: peptidase M16-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPAIAMLDVQIDFDAGSRRDPPD KAGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQFGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFP EAIWQRERQRMQAGLKESYTRPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTR AQADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKRADPDYFALTVGNYILGGGGF VSRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPDQAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALR IDSNRKLLDNIAAIAWNNLPLDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP
Sequences:
>Translated_461_residues MTIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPAIAMLDVQIDFDAGSRRDPPD KAGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQFGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFP EAIWQRERQRMQAGLKESYTRPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTR AQADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKRADPDYFALTVGNYILGGGGF VSRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPDQAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALR IDSNRKLLDNIAAIAWNNLPLDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP >Mature_460_residues TIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPAIAMLDVQIDFDAGSRRDPPDK AGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQFGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFPE AIWQRERQRMQAGLKESYTRPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTRA QADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKRADPDYFALTVGNYILGGGGFV SRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPDQAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALRI DSNRKLLDNIAAIAWNNLPLDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 49027; Mature: 48896
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPA CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCEEEEEECCC IAMLDVQIDFDAGSRRDPPDKAGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQ EEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH FGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFPEAIWQRERQRMQAGLKESYT HCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC RPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTR CHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKR HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC ADPDYFALTVGNYILGGGGFVSRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPD CCCCEEEEEECCEEECCCHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEEECCCCH QAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALRIDSNRKLLDNIAAIAWNNLP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCCCC LDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC >Mature Secondary Structure TIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCEEEEEECCC IAMLDVQIDFDAGSRRDPPDKAGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQ EEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH FGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFPEAIWQRERQRMQAGLKESYT HCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC RPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTR CHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKR HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC ADPDYFALTVGNYILGGGGFVSRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPD CCCCEEEEEECCEEECCCHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEEECCCCH QAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALRIDSNRKLLDNIAAIAWNNLP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCCCC LDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]