Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787176

Identifier: 91787176

GI number: 91787176

Start: 1322470

End: 1323855

Strand: Direct

Name: 91787176

Synonym: Bpro_1280

Alternate gene names: NA

Gene position: 1322470-1323855 (Clockwise)

Preceding gene: 91787175

Following gene: 91787177

Centisome position: 25.43

GC content: 66.38

Gene sequence:

>1386_bases
ATGACCATCGTCATTCCCATTCCAGACAAGGCTGCCAGAAACAGGGTCCGCCGCACCCTTTTATCGGGGGCCGCAGGCTT
GCTGGCGCTATGCCTCCAGTCGGGCGTGCTGGCCGCCATTCCCGTGCAGCACTGGACCCAGCCCAGCGGGGCCCGGGTCT
ACCTGTTGGAGAGCCCGGCCATTGCCATGCTGGATGTGCAGATTGATTTCGATGCCGGCAGCCGGCGCGACCCGCCTGAC
AAGGCGGGGTTGGCCGGCGTCACGGCAGGCATGCTCGACAAGGGCGTACGCGGGAGCATTGGCGAGCCGGCTATGGACGA
AAACGCGCTGAGCGAAGCCTGGGCTGATCTGGGCGCGCAATTTGGCGCGGGCGCCAGCTCGGACCGCATGGGATTTTCAC
TGCGCTCGCTGACCGAGCCTGGGCTGCTGGACAAGGCCGTGGCGCTGGCTGCGCGCCAAATTGCCGAGCCATCTTTCCCC
GAGGCGATCTGGCAGCGTGAACGCCAGCGCATGCAGGCCGGGCTCAAGGAGTCCTACACCCGCCCCGCCAGTGTGATTGG
CCGCGCCTATGCCCAGGCGGTGTATGGCAACCACCCCTATGGCTACCAGGTGACGGAAGCCAGCCTGGCCCGCATCAGCG
TGGCTGACATGCGGGCGGCCCACGCGGCCGGCGTGGTGGCCTGTCGTGCGCGCATCAGCATGGTGGGCGCCGTCACGCGC
GCGCAGGCCGATGCCATTGCCGCGCGCCTGCTGTCGCGCCTGCCGCAAGTGCCCTGCGCCAGCCTGCCGCCCGCGCCGAT
GGTGGCCGAGGTGGCGCCGCTGGCCGAGGCACAGGAAAAGCGCATTCCCTTCGATTCGGCGCAGGCCCATGTGCTGATCG
GCCAGCCCGGCTTCAAGCGGGCCGACCCGGACTATTTCGCGTTGACCGTGGGCAATTACATTCTCGGCGGTGGCGGCTTT
GTGTCGCGCCTGTCCAGCGAGGTGCGGGAAAAGCGCGGCCTGACCTACGGCGTCTCCAGCTACTTCTCGCCCGGCCTGCA
TGCCGGCAGTTTCACCGTGGGCCTGCAAACCCGGCCCGATCAGGCCGCGCAGGCCGTGCAAATCGTGCGCCAGGTGGTGA
ATGACTTCGTGGCCAACGGGCCTACCGAGGCCGAACTTCAGGCCGCCAAGGCCAACCTGATCGGCGGTTTTGCGCTGCGC
ATCGACAGCAACCGAAAATTGCTCGACAACATTGCCGCTATCGCCTGGAACAACCTGCCGCTCGATTACCTGGATACCTG
GACGCAGCAGATCGACAAGGTCACCCGGGCGGAGATCAAGGCGGCATTTGCCCGCAAATTACAACCCGACAAGATGATTA
CCGTGATTCTGGGAGCCGCGCCATGA

Upstream 100 bases:

>100_bases
AGCCCGTGGACCCGAACTCCCGGCGCCGCCAGCCGCGCGCCGCGGCTGCCGGCACCCGGCATTGAGCCTGGCCGCGAACC
GACATGAAACGATTTTTGCC

Downstream 100 bases:

>100_bases
AATACACCGCACTGGCAACTGAAAAGAAAACAGACAAGAAAGCGGAAAAAAAACCTGTCAGGTCGGGCAAGGTGGTAGCG
CGTAAAGCCAAACCTCCTGG

Product: peptidase M16-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPAIAMLDVQIDFDAGSRRDPPD
KAGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQFGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFP
EAIWQRERQRMQAGLKESYTRPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTR
AQADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKRADPDYFALTVGNYILGGGGF
VSRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPDQAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALR
IDSNRKLLDNIAAIAWNNLPLDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP

Sequences:

>Translated_461_residues
MTIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPAIAMLDVQIDFDAGSRRDPPD
KAGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQFGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFP
EAIWQRERQRMQAGLKESYTRPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTR
AQADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKRADPDYFALTVGNYILGGGGF
VSRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPDQAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALR
IDSNRKLLDNIAAIAWNNLPLDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP
>Mature_460_residues
TIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPAIAMLDVQIDFDAGSRRDPPDK
AGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQFGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFPE
AIWQRERQRMQAGLKESYTRPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTRA
QADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKRADPDYFALTVGNYILGGGGFV
SRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPDQAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALRI
DSNRKLLDNIAAIAWNNLPLDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 49027; Mature: 48896

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPA
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCEEEEEECCC
IAMLDVQIDFDAGSRRDPPDKAGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQ
EEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFPEAIWQRERQRMQAGLKESYT
HCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
RPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTR
CHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKR
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
ADPDYFALTVGNYILGGGGFVSRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPD
CCCCEEEEEECCEEECCCHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEEECCCCH
QAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALRIDSNRKLLDNIAAIAWNNLP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCCCC
LDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
>Mature Secondary Structure 
TIVIPIPDKAARNRVRRTLLSGAAGLLALCLQSGVLAAIPVQHWTQPSGARVYLLESPA
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCCEEEEEECCC
IAMLDVQIDFDAGSRRDPPDKAGLAGVTAGMLDKGVRGSIGEPAMDENALSEAWADLGAQ
EEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FGAGASSDRMGFSLRSLTEPGLLDKAVALAARQIAEPSFPEAIWQRERQRMQAGLKESYT
HCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
RPASVIGRAYAQAVYGNHPYGYQVTEASLARISVADMRAAHAAGVVACRARISMVGAVTR
CHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQADAIAARLLSRLPQVPCASLPPAPMVAEVAPLAEAQEKRIPFDSAQAHVLIGQPGFKR
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
ADPDYFALTVGNYILGGGGFVSRLSSEVREKRGLTYGVSSYFSPGLHAGSFTVGLQTRPD
CCCCEEEEEECCEEECCCHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEEECCCCH
QAAQAVQIVRQVVNDFVANGPTEAELQAAKANLIGGFALRIDSNRKLLDNIAAIAWNNLP
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCCCC
LDYLDTWTQQIDKVTRAEIKAAFARKLQPDKMITVILGAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]