Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is ctaE [H]
Identifier: 91787146
GI number: 91787146
Start: 1294375
End: 1295256
Strand: Direct
Name: ctaE [H]
Synonym: Bpro_1249
Alternate gene names: 91787146
Gene position: 1294375-1295256 (Clockwise)
Preceding gene: 91787145
Following gene: 91787148
Centisome position: 24.89
GC content: 59.07
Gene sequence:
>882_bases ATGTCATCAGCAACCCATGCGGGAACCCCACACTACTTCGTGCCCAGCCCTTCCCGGCATCCGGTGATGGCGGCCATTGG CCTGTTTTTTGTGATCCTCGGCGCCAGCCAGTGGATCAATGGCGCGGGCTGGGGTGCCTGGTCGCTGGCCTTCGGCCTGG TGTGGTGGCTTGTCACCCTTTTTCAGTGGTTCCGTGACGCCATTGGTGAAAGTGAAAGCGGCCTGTACGGCCGCAAGATC GACCTGTCGTTCCGCTGGAGCATGAGCTGGTTCATTTTTTCCGAAGTGATGTTCTTCGGTGCCTTCTTCACGGCACTCTG GTGGGCCCGCTCGCATTCAGTGCCCGCACTCGGAAGCCTTGACAACGCGCTGCTGTGGCCTGACTTCAAGGCTGTCTGGC CCAGTGTTGCCGCGGGTGTCACCGCCTCGCCTGCCGACATCATCGAGCCGTTCACCACCATGACGCCGTTCTGGTTGCCT ACCATCAACACCGCGCTGCTGCTCAGTTCGGGTGTGACGCTGACCATTGCCCACCATGCCCTGCGCGATAACCATCGCGG CCTGACCATTGCCTTCATGTGGGCGACGGTGCTGTTGGGCATCATCTTCCTGGGTGTGCAGGGTTACGAGTACGCCCATG CCTATTCCGAGCTCAACCTCAAGCTCACCTCGGGCGTGTATGGCTCCACCTTTTACATGCTGACGGGCTTCCACGGTTTT CACGTGTTTGTCGGCATGCTGATGCTGCTGTTCATTACCCTGCGCCTGCAAAAAGGCCACTTCACGCCGGAAAAGCATTT CGGCTTTGAAGGTGCCGCCTGGTACTGGCACTTTGTGGACGTGGTCTGGCTGGGTCTTTACATCCTCGTTTACTGGCTGT AA
Upstream 100 bases:
>100_bases GTGAACTGGATGGTTGCGCGCTAGGGGCCCGGTGCGCAGCAAACTTTCACGGTATTGAATCAGAAAATTATTGAAAATTC GAGAGAACAGGAGTCGAGCG
Downstream 100 bases:
>100_bases GGCGCGATTTTCAGGCGCGGTGCGCGCAGGCCTATGGTGGTCTGCACGTACGTGAAGTCCTACCGCTTGCCGCGGCAGGT GCGACAATAAAAGCAAAGGC
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSSATHAGTPHYFVPSPSRHPVMAAIGLFFVILGASQWINGAGWGAWSLAFGLVWWLVTLFQWFRDAIGESESGLYGRKI DLSFRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGSLDNALLWPDFKAVWPSVAAGVTASPADIIEPFTTMTPFWLP TINTALLLSSGVTLTIAHHALRDNHRGLTIAFMWATVLLGIIFLGVQGYEYAHAYSELNLKLTSGVYGSTFYMLTGFHGF HVFVGMLMLLFITLRLQKGHFTPEKHFGFEGAAWYWHFVDVVWLGLYILVYWL
Sequences:
>Translated_293_residues MSSATHAGTPHYFVPSPSRHPVMAAIGLFFVILGASQWINGAGWGAWSLAFGLVWWLVTLFQWFRDAIGESESGLYGRKI DLSFRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGSLDNALLWPDFKAVWPSVAAGVTASPADIIEPFTTMTPFWLP TINTALLLSSGVTLTIAHHALRDNHRGLTIAFMWATVLLGIIFLGVQGYEYAHAYSELNLKLTSGVYGSTFYMLTGFHGF HVFVGMLMLLFITLRLQKGHFTPEKHFGFEGAAWYWHFVDVVWLGLYILVYWL >Mature_292_residues SSATHAGTPHYFVPSPSRHPVMAAIGLFFVILGASQWINGAGWGAWSLAFGLVWWLVTLFQWFRDAIGESESGLYGRKID LSFRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGSLDNALLWPDFKAVWPSVAAGVTASPADIIEPFTTMTPFWLPT INTALLLSSGVTLTIAHHALRDNHRGLTIAFMWATVLLGIIFLGVQGYEYAHAYSELNLKLTSGVYGSTFYMLTGFHGFH VFVGMLMLLFITLRLQKGHFTPEKHFGFEGAAWYWHFVDVVWLGLYILVYWL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=233, Percent_Identity=40.343347639485, Blast_Score=143, Evalue=2e-34, Organism=Escherichia coli, GI1786633, Length=176, Percent_Identity=27.8409090909091, Blast_Score=62, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6226542, Length=235, Percent_Identity=34.0425531914894, Blast_Score=102, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 33038; Mature: 32906
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSATHAGTPHYFVPSPSRHPVMAAIGLFFVILGASQWINGAGWGAWSLAFGLVWWLVTL CCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FQWFRDAIGESESGLYGRKIDLSFRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGSL HHHHHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DNALLWPDFKAVWPSVAAGVTASPADIIEPFTTMTPFWLPTINTALLLSSGVTLTIAHHA CCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHH LRDNHRGLTIAFMWATVLLGIIFLGVQGYEYAHAYSELNLKLTSGVYGSTFYMLTGFHGF HHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCCCHHHHHHCCCHH HVFVGMLMLLFITLRLQKGHFTPEKHFGFEGAAWYWHFVDVVWLGLYILVYWL HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSATHAGTPHYFVPSPSRHPVMAAIGLFFVILGASQWINGAGWGAWSLAFGLVWWLVTL CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FQWFRDAIGESESGLYGRKIDLSFRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGSL HHHHHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DNALLWPDFKAVWPSVAAGVTASPADIIEPFTTMTPFWLPTINTALLLSSGVTLTIAHHA CCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHH LRDNHRGLTIAFMWATVLLGIIFLGVQGYEYAHAYSELNLKLTSGVYGSTFYMLTGFHGF HHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCCCHHHHHHCCCHH HVFVGMLMLLFITLRLQKGHFTPEKHFGFEGAAWYWHFVDVVWLGLYILVYWL HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]