Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91787129
Identifier: 91787129
GI number: 91787129
Start: 1277897
End: 1278895
Strand: Direct
Name: 91787129
Synonym: Bpro_1232
Alternate gene names: NA
Gene position: 1277897-1278895 (Clockwise)
Preceding gene: 91787128
Following gene: 91787130
Centisome position: 24.57
GC content: 64.36
Gene sequence:
>999_bases ATGCCTTTCAAGTTCTCTGCAGCACGCCGCACCCTGGGCCTGGCCGCATTCGCGCTGGCCGCCGCCGGTTTGCTGCCGGC CACGGCCGGCGCCCAGCAGTTTCCGACCAAGCCGGTGCGCATCATCACGCCGTTTCCGGTGGGCGGTGGCCCTGATGGCG TGGCGCGTCTGGTGGCCGACAAACTGTCACGCACCTGGGGTCAGCCGGTGGTGGTCGAGAACCGGCCCGGCGGCAACGGT TTCATCGCGATCGATGCCTTCAAGCGCGGCAGCAAGGATGGGCATGACCTGATCGTGCTCGACAACGTGCACCTGGCAGC CTACCCGGCGCTGTTCAAGAAACTGCCCTACGACGCAGGCAAGGACTTTGATGCGCTGCTGCCGCTCTTCAAGACCTACT TTTTCTTCACCGTGCCGACGACCAGCAAATACAAGTCAATCGCTGACCTGGTGGCCGACGCGAAGGCCAACCCCGGCAAG CTGGACTACGGTTCCTGGTCGGTCGGCAATCCCGTGCACCTCGGTTCGGAGCTGTTCGAATCAGCGACCGGCACGCAGAT GGAGCATGTGATTTACAAGGAGACCACCCAGCTCTACACCTCGGTCTCCACGGGCGAGTTGGCCTTCGCGCTGGGCAGCA GCGCCACCGCGGGGCCGCTGCAGCGCGCGGCCAAACTGCGCTTCCTGGCGGTGGCGGCGCCCAAGCGCGTGGCGGCCTTC CCCGATGTACCGACGGTCGGCGAGTCCGGTGGTCCGAAGGGCTTCGAGGTCACCGGCTGGAATGCGATGGCGGTGCCCAA GGGCCTTCCTGACGCCGTGAGCGACAAGATCAAGCGCGACATCGAGAAGGCGCTTGCCGAACCCGACGTGCTTGAGAAAT TCAAGAGCTTTGGTTATGAGCCCTTTCCGCAGACACGCGAGCAGTTCAACCAGTTCGTGCAGAGCGAGACCCGGCGTTTC GGCGACGTGATCCGCAAGGCAAACGTCTCTCTGGACTGA
Upstream 100 bases:
>100_bases AATAGCAATCTGCGCATTTCTCTTTCTATTGGACGTCAGGCGTCCGAACCCTGTTTTATTTCCGGAATTCAAGTTAATTC ATAGTTACAAGGAGACAGTC
Downstream 100 bases:
>100_bases CAGGCCCTGCCCGGCGTCTGCCGCTTGTGTCTTCCACCGGACCTTCGGGTTGTTGATTGAGAAAGTGCCAGCATGAACCA TCTTCGTCCAGAACGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MPFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVADKLSRTWGQPVVVENRPGGNG FIAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAGKDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGK LDYGSWSVGNPVHLGSELFESATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAF PDVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYEPFPQTREQFNQFVQSETRRF GDVIRKANVSLD
Sequences:
>Translated_332_residues MPFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVADKLSRTWGQPVVVENRPGGNG FIAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAGKDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGK LDYGSWSVGNPVHLGSELFESATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAF PDVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYEPFPQTREQFNQFVQSETRRF GDVIRKANVSLD >Mature_331_residues PFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVADKLSRTWGQPVVVENRPGGNGF IAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAGKDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGKL DYGSWSVGNPVHLGSELFESATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAFP DVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYEPFPQTREQFNQFVQSETRRFG DVIRKANVSLD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35669; Mature: 35538
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVAD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH KLSRTWGQPVVVENRPGGNGFIAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAG HHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC KDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGKLDYGSWSVGNPVHLGSELFE CCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH SATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAF HHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEECCCHHCCC PDVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYE CCCCCCCCCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC PFPQTREQFNQFVQSETRRFGDVIRKANVSLD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVAD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH KLSRTWGQPVVVENRPGGNGFIAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAG HHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC KDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGKLDYGSWSVGNPVHLGSELFE CCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH SATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAF HHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEECCCHHCCC PDVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYE CCCCCCCCCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC PFPQTREQFNQFVQSETRRFGDVIRKANVSLD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]