Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787129

Identifier: 91787129

GI number: 91787129

Start: 1277897

End: 1278895

Strand: Direct

Name: 91787129

Synonym: Bpro_1232

Alternate gene names: NA

Gene position: 1277897-1278895 (Clockwise)

Preceding gene: 91787128

Following gene: 91787130

Centisome position: 24.57

GC content: 64.36

Gene sequence:

>999_bases
ATGCCTTTCAAGTTCTCTGCAGCACGCCGCACCCTGGGCCTGGCCGCATTCGCGCTGGCCGCCGCCGGTTTGCTGCCGGC
CACGGCCGGCGCCCAGCAGTTTCCGACCAAGCCGGTGCGCATCATCACGCCGTTTCCGGTGGGCGGTGGCCCTGATGGCG
TGGCGCGTCTGGTGGCCGACAAACTGTCACGCACCTGGGGTCAGCCGGTGGTGGTCGAGAACCGGCCCGGCGGCAACGGT
TTCATCGCGATCGATGCCTTCAAGCGCGGCAGCAAGGATGGGCATGACCTGATCGTGCTCGACAACGTGCACCTGGCAGC
CTACCCGGCGCTGTTCAAGAAACTGCCCTACGACGCAGGCAAGGACTTTGATGCGCTGCTGCCGCTCTTCAAGACCTACT
TTTTCTTCACCGTGCCGACGACCAGCAAATACAAGTCAATCGCTGACCTGGTGGCCGACGCGAAGGCCAACCCCGGCAAG
CTGGACTACGGTTCCTGGTCGGTCGGCAATCCCGTGCACCTCGGTTCGGAGCTGTTCGAATCAGCGACCGGCACGCAGAT
GGAGCATGTGATTTACAAGGAGACCACCCAGCTCTACACCTCGGTCTCCACGGGCGAGTTGGCCTTCGCGCTGGGCAGCA
GCGCCACCGCGGGGCCGCTGCAGCGCGCGGCCAAACTGCGCTTCCTGGCGGTGGCGGCGCCCAAGCGCGTGGCGGCCTTC
CCCGATGTACCGACGGTCGGCGAGTCCGGTGGTCCGAAGGGCTTCGAGGTCACCGGCTGGAATGCGATGGCGGTGCCCAA
GGGCCTTCCTGACGCCGTGAGCGACAAGATCAAGCGCGACATCGAGAAGGCGCTTGCCGAACCCGACGTGCTTGAGAAAT
TCAAGAGCTTTGGTTATGAGCCCTTTCCGCAGACACGCGAGCAGTTCAACCAGTTCGTGCAGAGCGAGACCCGGCGTTTC
GGCGACGTGATCCGCAAGGCAAACGTCTCTCTGGACTGA

Upstream 100 bases:

>100_bases
AATAGCAATCTGCGCATTTCTCTTTCTATTGGACGTCAGGCGTCCGAACCCTGTTTTATTTCCGGAATTCAAGTTAATTC
ATAGTTACAAGGAGACAGTC

Downstream 100 bases:

>100_bases
CAGGCCCTGCCCGGCGTCTGCCGCTTGTGTCTTCCACCGGACCTTCGGGTTGTTGATTGAGAAAGTGCCAGCATGAACCA
TCTTCGTCCAGAACGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MPFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVADKLSRTWGQPVVVENRPGGNG
FIAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAGKDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGK
LDYGSWSVGNPVHLGSELFESATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAF
PDVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYEPFPQTREQFNQFVQSETRRF
GDVIRKANVSLD

Sequences:

>Translated_332_residues
MPFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVADKLSRTWGQPVVVENRPGGNG
FIAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAGKDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGK
LDYGSWSVGNPVHLGSELFESATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAF
PDVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYEPFPQTREQFNQFVQSETRRF
GDVIRKANVSLD
>Mature_331_residues
PFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVADKLSRTWGQPVVVENRPGGNGF
IAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAGKDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGKL
DYGSWSVGNPVHLGSELFESATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAFP
DVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYEPFPQTREQFNQFVQSETRRFG
DVIRKANVSLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35669; Mature: 35538

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVAD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
KLSRTWGQPVVVENRPGGNGFIAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAG
HHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC
KDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGKLDYGSWSVGNPVHLGSELFE
CCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
SATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAF
HHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEECCCHHCCC
PDVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYE
CCCCCCCCCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
PFPQTREQFNQFVQSETRRFGDVIRKANVSLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFKFSAARRTLGLAAFALAAAGLLPATAGAQQFPTKPVRIITPFPVGGGPDGVARLVAD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHH
KLSRTWGQPVVVENRPGGNGFIAIDAFKRGSKDGHDLIVLDNVHLAAYPALFKKLPYDAG
HHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC
KDFDALLPLFKTYFFFTVPTTSKYKSIADLVADAKANPGKLDYGSWSVGNPVHLGSELFE
CCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
SATGTQMEHVIYKETTQLYTSVSTGELAFALGSSATAGPLQRAAKLRFLAVAAPKRVAAF
HHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEECCCHHCCC
PDVPTVGESGGPKGFEVTGWNAMAVPKGLPDAVSDKIKRDIEKALAEPDVLEKFKSFGYE
CCCCCCCCCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
PFPQTREQFNQFVQSETRRFGDVIRKANVSLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]