Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yncE [C]

Identifier: 91787077

GI number: 91787077

Start: 1219845

End: 1220891

Strand: Direct

Name: yncE [C]

Synonym: Bpro_1180

Alternate gene names: 91787077

Gene position: 1219845-1220891 (Clockwise)

Preceding gene: 91787076

Following gene: 91787078

Centisome position: 23.46

GC content: 65.62

Gene sequence:

>1047_bases
ATGGTCGCAAGAAAGAATCTGTGGTGGTTGGCGGTGCTGCAGGCCGGGCTGCTGGTTTGGGCGAGCGCTGCGCCGGCCGC
CGACAAGGTGTATGTGGCGAACGAGCGGGCTGACACGATCAGTGTGCTGGATGCCGCGTCGTTCAGGGTGGTGGCAAGCG
TGCGCGTTGGCAGGATGCCGCATAACGTGCAGGTGTCGCCCGATGGCCAGACCGTTTGGGTGACCAACAATGGCGAACCC
GGCCGGGCGGCCGACGCCCCGGCGCACCAGGGCATGGACCCGGGCGCACACGATGCGATGGTGAAGGCCGGGGCCGTCTG
GGCCATAGACACGCGCAGCGATACGGTCGTTGCGAAGGTGCCGGTGGGCCTGCACCCGGCCCACGTCGTGCTGACGCCGG
ACGGCCGCTTCGCCTATGTGACCAACGGGGGCGACAACACGGTGAGTGTGGTGGATACCGCGGCGCGGCGGGTGGTGGAG
ACGATTCCGGTGGGCGAGTATCCGCACGGTATTCGAATCAGCCCGGATGGCAGTCAGGCCTACGTTGCCAACCTGAAGGA
CGGAACGGTGTCGGTGATTGATACCACCAGCAAGTTGGAGATGCTGAGAATTCCGGTAGGCAAGGGTCCGGCCCAGGTCG
GTTTCACGCCGGACGGTCGTCTCGCCTTCGTCTCGCTGTCGGAAGAAAATGCGGTCGCCGTCATCGACCCGGTCGCGCGC
AAGGTCACCCGCAAGATAGTGGTGGGTGCGGTTCCCATTCAGCTCTACGCGACGCCGGACTCCCGCACGTTGCTGGTGGC
CAATCAGGGCACGCGCCAGAAGCCCGGCAAGACCCTCAGCATGATCGACCTCCAGAGCCTGACCGTCGCGAAGACCGTCG
AGACCGGCGCCGGCGCCCATGGCGTGGTGATAGACCGTGACGGCCGCTATGCCTACGTCACGAATACCTGGGCCAATTCA
GTGTCCGTGCTTGACGTGAAGGACCGCAAGGTCGTTGCAACGGTTCGCGTGGGCAAGGGGCCCAACGGGATCAGCGTGGC
GCCCTGA

Upstream 100 bases:

>100_bases
GTCAGGGATCCGGCGAATGTTTTTTGAGGAACGGCGCAGGACTGCAGGGGCTGTGCCGCGCAGAGTATCGGTGTTGGTTT
GGTCTTAACCAGGGGAGATC

Downstream 100 bases:

>100_bases
GGCCCTGAGGCCCTGACGCCTGTCTCCGCGCCGTGGACGCTGGCGTGGCTTGATGCATGTCAAGCCGGCTGGCGCCCGGC
GTCTTTAGTATCAGATCATT

Product: YVTN beta-propeller repeat-containing protein

Products: NA

Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; YVTN Family Beta-Propeller Repeat Protein; Cell Surface Protein; Cytochrome D1 Heme Region; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Beta-Propeller Fold Protein; Surface Antigen; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; Yvtn Beta-Propeller Repeat Family Protein; Outer Membrane Protein; Glycine-Rich Cell Wall Protein; YVTN Beta-Propeller Repeat Family Protein; PGRS-Subfamily Gly-Rich Protein; IPT/TIG Domain Protein; Vegetative Incompatibility; Signal Peptide; Beta-Propeller Repeat Protein YVTN Family; LOW QUALITY PROTEIN Surface Antigen Protein; Surface Antigen-Like Protein; Alkaline Serine Protease; Cytochrome D1 Heme Subunit; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; Alpha-1 2-Mannosidase; SGL Domain-Containing Protein; Lipoprotein; Exported Protein; YVTN Family Beta-Propeller Repeat Family Protein

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MVARKNLWWLAVLQAGLLVWASAAPAADKVYVANERADTISVLDAASFRVVASVRVGRMPHNVQVSPDGQTVWVTNNGEP
GRAADAPAHQGMDPGAHDAMVKAGAVWAIDTRSDTVVAKVPVGLHPAHVVLTPDGRFAYVTNGGDNTVSVVDTAARRVVE
TIPVGEYPHGIRISPDGSQAYVANLKDGTVSVIDTTSKLEMLRIPVGKGPAQVGFTPDGRLAFVSLSEENAVAVIDPVAR
KVTRKIVVGAVPIQLYATPDSRTLLVANQGTRQKPGKTLSMIDLQSLTVAKTVETGAGAHGVVIDRDGRYAYVTNTWANS
VSVLDVKDRKVVATVRVGKGPNGISVAP

Sequences:

>Translated_348_residues
MVARKNLWWLAVLQAGLLVWASAAPAADKVYVANERADTISVLDAASFRVVASVRVGRMPHNVQVSPDGQTVWVTNNGEP
GRAADAPAHQGMDPGAHDAMVKAGAVWAIDTRSDTVVAKVPVGLHPAHVVLTPDGRFAYVTNGGDNTVSVVDTAARRVVE
TIPVGEYPHGIRISPDGSQAYVANLKDGTVSVIDTTSKLEMLRIPVGKGPAQVGFTPDGRLAFVSLSEENAVAVIDPVAR
KVTRKIVVGAVPIQLYATPDSRTLLVANQGTRQKPGKTLSMIDLQSLTVAKTVETGAGAHGVVIDRDGRYAYVTNTWANS
VSVLDVKDRKVVATVRVGKGPNGISVAP
>Mature_348_residues
MVARKNLWWLAVLQAGLLVWASAAPAADKVYVANERADTISVLDAASFRVVASVRVGRMPHNVQVSPDGQTVWVTNNGEP
GRAADAPAHQGMDPGAHDAMVKAGAVWAIDTRSDTVVAKVPVGLHPAHVVLTPDGRFAYVTNGGDNTVSVVDTAARRVVE
TIPVGEYPHGIRISPDGSQAYVANLKDGTVSVIDTTSKLEMLRIPVGKGPAQVGFTPDGRLAFVSLSEENAVAVIDPVAR
KVTRKIVVGAVPIQLYATPDSRTLLVANQGTRQKPGKTLSMIDLQSLTVAKTVETGAGAHGVVIDRDGRYAYVTNTWANS
VSVLDVKDRKVVATVRVGKGPNGISVAP

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36607; Mature: 36607

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARKNLWWLAVLQAGLLVWASAAPAADKVYVANERADTISVLDAASFRVVASVRVGRMP
CCCCCCCHHHHHHHHCCEEEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEEEEECCCC
HNVQVSPDGQTVWVTNNGEPGRAADAPAHQGMDPGAHDAMVKAGAVWAIDTRSDTVVAKV
CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEECCEEEEEECCCCEEEEEE
PVGLHPAHVVLTPDGRFAYVTNGGDNTVSVVDTAARRVVETIPVGEYPHGIRISPDGSQA
CCCCCCEEEEECCCCCEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEECCCCCCE
YVANLKDGTVSVIDTTSKLEMLRIPVGKGPAQVGFTPDGRLAFVSLSEENAVAVIDPVAR
EEEECCCCEEEEEECCCCEEEEEEECCCCCCEECCCCCCCEEEEEECCCCCEEEECHHHH
KVTRKIVVGAVPIQLYATPDSRTLLVANQGTRQKPGKTLSMIDLQSLTVAKTVETGAGAH
HHHHEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCC
GVVIDRDGRYAYVTNTWANSVSVLDVKDRKVVATVRVGKGPNGISVAP
EEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MVARKNLWWLAVLQAGLLVWASAAPAADKVYVANERADTISVLDAASFRVVASVRVGRMP
CCCCCCCHHHHHHHHCCEEEECCCCCCCEEEEECCCCCEEEEEECCCEEEEEEEEECCCC
HNVQVSPDGQTVWVTNNGEPGRAADAPAHQGMDPGAHDAMVKAGAVWAIDTRSDTVVAKV
CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEECCEEEEEECCCCEEEEEE
PVGLHPAHVVLTPDGRFAYVTNGGDNTVSVVDTAARRVVETIPVGEYPHGIRISPDGSQA
CCCCCCEEEEECCCCCEEEEECCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEECCCCCCE
YVANLKDGTVSVIDTTSKLEMLRIPVGKGPAQVGFTPDGRLAFVSLSEENAVAVIDPVAR
EEEECCCCEEEEEECCCCEEEEEEECCCCCCEECCCCCCCEEEEEECCCCCEEEECHHHH
KVTRKIVVGAVPIQLYATPDSRTLLVANQGTRQKPGKTLSMIDLQSLTVAKTVETGAGAH
HHHHEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCC
GVVIDRDGRYAYVTNTWANSVSVLDVKDRKVVATVRVGKGPNGISVAP
EEEEECCCCEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA