Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yeiH [C]
Identifier: 91787056
GI number: 91787056
Start: 1200495
End: 1201517
Strand: Direct
Name: yeiH [C]
Synonym: Bpro_1159
Alternate gene names: 91787056
Gene position: 1200495-1201517 (Clockwise)
Preceding gene: 91787050
Following gene: 91787062
Centisome position: 23.09
GC content: 63.25
Gene sequence:
>1023_bases GTGCCTTTTTCCTCACCGTCTTCGCTTTTCTCCTCTCTCACCCTTCGACTGCCTGGCACCCTGGTGTGCGTGGTCATCGC CCTGGCGGCCACTTTTTTGTCGGAGCATTACGGCGGGCCGCAACTGCTGTACGCCTTGCTGATCGGTCTGGCATTTCATT TTCTGTGCAGCAATCCCCGCGTCAGGCCCGGCGTTGACTTTTGTGGCCGAAGCCTGCTGCGCATCGGCGTGGCATTGCTC GGCGTGCGCATCACCTTGACCCAGGTTGCCAGGCTTGGCCTCGAATCCGCGGTGGTCATCGCGGTGGGGGTGGCGCTGAC GATTCTTTTTGGATTGCTGCTGGCCCGGTGGTTGAAACGTCCCCGTGAGGAGGGCCTGCTCTCCGGCGGCGCCGTGGCCA TCTGCGGGGCATCGGCGGTGCTGGCCCTGTCGTCCGTCCTGCCGCAAACCAGGGAGAACGAACGCTTCACGCTGCTGGCG GTGGTGGGCGTAACGGTGTTGTCCACCCTGAGCATGGTGATCTACCCCTTCGCGCTCAAGGCCATCGGCCTTCCCCCTGA GCAGGCGGGTATTTTCCTGGGTGGCACCATCCATGATGTGGCGCAGGTGGTGGCTGCCGGCATGATGCTGGGCCCCGCAG TGGGCGACACCGCCACCGTGGTGAAGCTGTTTCGCGTCATGCTGCTGATGCCCATTGTGGTGTTCGTCGCCATCAGCTAC CGAAACCATCCGGATACCAAGGCGACCGATGATGAAGTGCCGCTGGTTCCGGGCTTCCTGCTCGCCTTCATTGTGCTGGT GCTGCTGGCCAGCATCGGCACATTCACACCCGATATGACGCAGCTGGCGAGCAGCACCTCGCGCTGGCTGCTGGTCACGG CCATTGCGGCGGCGGGCATCAAGACCAGCTTTGAAGACCTGCTCAAACTCGGCTGGCAACCGGTTGCCATGCTGGTGGGC GAGACGGTTTTCATCGCCTCGCTGGTTCTGGCCGCCATTGTGACGCTGCGGCTGGGCCTGTAG
Upstream 100 bases:
>100_bases ATAATAGTAGCATACGGAAATTGCCCGTGCAAGACGAAAAATCACTCTGCAACAGCCGTTTTTTCGCAGACATGCCAGAC CTCAAAACGGACTCCAGCAA
Downstream 100 bases:
>100_bases CTGCGGGGCTGCCTGCCGGATGAGGTCCGCGGCTTTACACCAGCCGCAAGGCGGTCAGCTCGGTAATTTGCGCCTCCCCC GCCAGGCCGATACGCCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPFSSPSSLFSSLTLRLPGTLVCVVIALAATFLSEHYGGPQLLYALLIGLAFHFLCSNPRVRPGVDFCGRSLLRIGVALL GVRITLTQVARLGLESAVVIAVGVALTILFGLLLARWLKRPREEGLLSGGAVAICGASAVLALSSVLPQTRENERFTLLA VVGVTVLSTLSMVIYPFALKAIGLPPEQAGIFLGGTIHDVAQVVAAGMMLGPAVGDTATVVKLFRVMLLMPIVVFVAISY RNHPDTKATDDEVPLVPGFLLAFIVLVLLASIGTFTPDMTQLASSTSRWLLVTAIAAAGIKTSFEDLLKLGWQPVAMLVG ETVFIASLVLAAIVTLRLGL
Sequences:
>Translated_340_residues MPFSSPSSLFSSLTLRLPGTLVCVVIALAATFLSEHYGGPQLLYALLIGLAFHFLCSNPRVRPGVDFCGRSLLRIGVALL GVRITLTQVARLGLESAVVIAVGVALTILFGLLLARWLKRPREEGLLSGGAVAICGASAVLALSSVLPQTRENERFTLLA VVGVTVLSTLSMVIYPFALKAIGLPPEQAGIFLGGTIHDVAQVVAAGMMLGPAVGDTATVVKLFRVMLLMPIVVFVAISY RNHPDTKATDDEVPLVPGFLLAFIVLVLLASIGTFTPDMTQLASSTSRWLLVTAIAAAGIKTSFEDLLKLGWQPVAMLVG ETVFIASLVLAAIVTLRLGL >Mature_339_residues PFSSPSSLFSSLTLRLPGTLVCVVIALAATFLSEHYGGPQLLYALLIGLAFHFLCSNPRVRPGVDFCGRSLLRIGVALLG VRITLTQVARLGLESAVVIAVGVALTILFGLLLARWLKRPREEGLLSGGAVAICGASAVLALSSVLPQTRENERFTLLAV VGVTVLSTLSMVIYPFALKAIGLPPEQAGIFLGGTIHDVAQVVAAGMMLGPAVGDTATVVKLFRVMLLMPIVVFVAISYR NHPDTKATDDEVPLVPGFLLAFIVLVLLASIGTFTPDMTQLASSTSRWLLVTAIAAAGIKTSFEDLLKLGWQPVAMLVGE TVFIASLVLAAIVTLRLGL
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=257, Percent_Identity=29.9610894941634, Blast_Score=113, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 35798; Mature: 35667
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFSSPSSLFSSLTLRLPGTLVCVVIALAATFLSEHYGGPQLLYALLIGLAFHFLCSNPR CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC VRPGVDFCGRSLLRIGVALLGVRITLTQVARLGLESAVVIAVGVALTILFGLLLARWLKR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHC PREEGLLSGGAVAICGASAVLALSSVLPQTRENERFTLLAVVGVTVLSTLSMVIYPFALK CHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH AIGLPPEQAGIFLGGTIHDVAQVVAAGMMLGPAVGDTATVVKLFRVMLLMPIVVFVAISY HCCCCHHHCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNHPDTKATDDEVPLVPGFLLAFIVLVLLASIGTFTPDMTQLASSTSRWLLVTAIAAAGI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCC KTSFEDLLKLGWQPVAMLVGETVFIASLVLAAIVTLRLGL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PFSSPSSLFSSLTLRLPGTLVCVVIALAATFLSEHYGGPQLLYALLIGLAFHFLCSNPR CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC VRPGVDFCGRSLLRIGVALLGVRITLTQVARLGLESAVVIAVGVALTILFGLLLARWLKR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHC PREEGLLSGGAVAICGASAVLALSSVLPQTRENERFTLLAVVGVTVLSTLSMVIYPFALK CHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH AIGLPPEQAGIFLGGTIHDVAQVVAAGMMLGPAVGDTATVVKLFRVMLLMPIVVFVAISY HCCCCHHHCCEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNHPDTKATDDEVPLVPGFLLAFIVLVLLASIGTFTPDMTQLASSTSRWLLVTAIAAAGI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCC KTSFEDLLKLGWQPVAMLVGETVFIASLVLAAIVTLRLGL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]