Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786836
Identifier: 91786836
GI number: 91786836
Start: 952943
End: 955030
Strand: Direct
Name: 91786836
Synonym: Bpro_0934
Alternate gene names: NA
Gene position: 952943-955030 (Clockwise)
Preceding gene: 91786835
Following gene: 91786837
Centisome position: 18.32
GC content: 65.66
Gene sequence:
>2088_bases GTGGGCGCGGCACTCAATGAAAATCTGACGCGGCATTCAACCTTGTGCCGGCGCGAAGCCGGCGCGTTCCAGAAGGCGGT TCAATCCGGCGAGGACGTCGTGGTGGCATGCACCCAGGAAAAGCGCCTCTTTGCGGAGCTGGGCGAGCAGACCGCGGGGG CGACTTCCGTGGTCAGGTTCGTCAATATCCGTGAAACCGGTGGCTGGAGCAAGGACGCCTCGGCCGCCAGCCCCAAGATC GCCGCGCTGCTGGCCGTCGCGCACCTGCCGGATGCAGAGCCCGTCTCGACCGTCACTTACAAAAGCGCTGGCCGCCTGCT GATAGTCGGTCCGCTGGACCGGGCCGAGCAGGTGGCCGGGCTGCTCGCCGATGCGCTGGACGTGACGATTTTTTCGCAAG GTGTCGCTGACCCGGCGTCGGGCGACTTTCCCGCGCAGGAGCGCAAGTACCCGGTCATCAGCGGTACCGGCCTGAGCCTG CAGGGCTGGCTGGGCGCTTTTGAAGCGAAATGGACAAAAGACAATCCGATTGACCTTGACCTGTGTACCCGCTGCAATGC CTGCGTGGCCGTTTGCCCCGAAGGCGCCATCGACCTGAGCTACCAGGTGGACAGCAGCAAATGCACCTCGCACCGGGACT GCGTGGCCGTCTGCAAGGTCGCCGGTGCGATCGACTTCAACCGCGAAGCGCAGGCCGCCACCGAGGCGTTTGACCTCGTG CTGGACCTCGGCCGCCAGCCGCTGATTACCCTGCATGCGCCACCCCAAGGCTACTTTGCATGCGATGCCTCCGCCGGGCT GGCCTTGCCCGGCCTGCTGCCGACGGTGGTCAAGCTGCGTGACCTGGTGGGCGAATTTGAAAAACCCAAATTCTTTGCCT ACAAGCAAAAGCTGTGCGCCCACAGCCGCAACGAAACCGTTGGCTGCAACGCATGCATCGACATCTGCTCGGCCGGCGCG GTCAGCAGCCAGAAAGAGCGCCAGCAGATCGTTGTCAATCCCAACCTGTGCATAGGCTGCGGCGCCTGCACCACCGTCTG CCCGACCGGTGCGCTCACCTACGCCTACCCCCGCGCCAGCGAGCAGGGCGTTCGCTTCAAGACCCTGCTTGCCACCTACG GCCGGGCCGGCGGTGCGCACCCGGTGCTGCTGCTGCACAGCCAGGGTGCCGGCCAGCAGGCCGTCGAGGCGCTGGGTCGC GCCGCCCAGCTGCACAAAACCGTTCAGGGTGTGCCCGCCAACGTGATCCCGCAGGCCTTGTGGCATACCGCCAGCCTGGG TCTGGACGTCTGGCTGAGCGCGCTGGCGTTTGGCGCCGAACAGGTGGCCGTGCTGGTCACGGACGAGGAGGCGCCGGCTT ACCTGGAAGGCCTGGCGGACCAGATGCGGGTGGCGCAGGCCATTCTCGGCGGCCTGGGTTACGCGGGCGTTCACTTTCAG CTGGTGCGCGTTCCGCCGGGCGCGGATGCCCAGGCGCTTGTCGGCCTGGATGCCAGCCTGCAAACCCTGGCGCGGGCCAG GCCCATGGTGCCCGCGGTCACTGCCCGCTTTGCGGTAGTCCAGGAAAAACGCAGCACGCTGGATATGGCTCTGGACCACC TGATTGCCCACGCCCCTGCCGCCCTGCCCGAAGCGATTGAGCTTCCCCGTTCAGGTTCGCCGTTTGGCAGCCTCGTCGTC AACACCGATACCTGCACCCTGTGCCTGAGCTGCGTGAGTGCCTGCCCGGCCAGCGCGCTGCAGGACAACCCCGAACGCCC GCAACTCAAATTCATTGAAAAGAACTGCGTGCAGTGTGGTTTATGCGCGGTGACCTGCCCTGAAGACGCCATCACGCTGC AGCCGCGGCTGTTGCTGACACCCCAGCGCAAGGAGGCGCGCGTGCTTAACGAGACGCAGCCCTACCAGTGCATACGCTGC GGCAAGCCCTTCGGCACGCTCAAGGCCATCGAGTCCATGCTGGGCAAGCTGGCGGGTCACGCCATGTTTCAGGGTGCGGC CGCGGACCGCCTCAAGATGTGCGGCGATTGCCGGGTCATCGACATCTACTCTGCAGACAACGAACTCAAGATCACCGATA TCCGCTAG
Upstream 100 bases:
>100_bases GCCGGGTCATTGCCTGACACTGGCGCCAGCCAACGCCCAGACGACCATGCCCACACTGATTTGCGACTGCAACCAGACCA TGCCCCTCCAGCCCCTGGCG
Downstream 100 bases:
>100_bases GCGACACCCACATGATGCAAGCGCAACTCGTACCTTCCACGCTGGATGAAGAAACCGCACGCGCGGAAGTCTATGGGCTG CTCGCGGCCCTGTTCTACGC
Product: 4Fe-4S ferredoxin
Products: NA
Alternate protein names: Methyl-Viologen-Reducing Hydrogenase Delta Subunit; 4Fe-4S Ferredoxin; 4fe-4S Ferredoxin; Polyferredoxins; Ferridoxin Protein
Number of amino acids: Translated: 695; Mature: 694
Protein sequence:
>695_residues MGAALNENLTRHSTLCRREAGAFQKAVQSGEDVVVACTQEKRLFAELGEQTAGATSVVRFVNIRETGGWSKDASAASPKI AALLAVAHLPDAEPVSTVTYKSAGRLLIVGPLDRAEQVAGLLADALDVTIFSQGVADPASGDFPAQERKYPVISGTGLSL QGWLGAFEAKWTKDNPIDLDLCTRCNACVAVCPEGAIDLSYQVDSSKCTSHRDCVAVCKVAGAIDFNREAQAATEAFDLV LDLGRQPLITLHAPPQGYFACDASAGLALPGLLPTVVKLRDLVGEFEKPKFFAYKQKLCAHSRNETVGCNACIDICSAGA VSSQKERQQIVVNPNLCIGCGACTTVCPTGALTYAYPRASEQGVRFKTLLATYGRAGGAHPVLLLHSQGAGQQAVEALGR AAQLHKTVQGVPANVIPQALWHTASLGLDVWLSALAFGAEQVAVLVTDEEAPAYLEGLADQMRVAQAILGGLGYAGVHFQ LVRVPPGADAQALVGLDASLQTLARARPMVPAVTARFAVVQEKRSTLDMALDHLIAHAPAALPEAIELPRSGSPFGSLVV NTDTCTLCLSCVSACPASALQDNPERPQLKFIEKNCVQCGLCAVTCPEDAITLQPRLLLTPQRKEARVLNETQPYQCIRC GKPFGTLKAIESMLGKLAGHAMFQGAAADRLKMCGDCRVIDIYSADNELKITDIR
Sequences:
>Translated_695_residues MGAALNENLTRHSTLCRREAGAFQKAVQSGEDVVVACTQEKRLFAELGEQTAGATSVVRFVNIRETGGWSKDASAASPKI AALLAVAHLPDAEPVSTVTYKSAGRLLIVGPLDRAEQVAGLLADALDVTIFSQGVADPASGDFPAQERKYPVISGTGLSL QGWLGAFEAKWTKDNPIDLDLCTRCNACVAVCPEGAIDLSYQVDSSKCTSHRDCVAVCKVAGAIDFNREAQAATEAFDLV LDLGRQPLITLHAPPQGYFACDASAGLALPGLLPTVVKLRDLVGEFEKPKFFAYKQKLCAHSRNETVGCNACIDICSAGA VSSQKERQQIVVNPNLCIGCGACTTVCPTGALTYAYPRASEQGVRFKTLLATYGRAGGAHPVLLLHSQGAGQQAVEALGR AAQLHKTVQGVPANVIPQALWHTASLGLDVWLSALAFGAEQVAVLVTDEEAPAYLEGLADQMRVAQAILGGLGYAGVHFQ LVRVPPGADAQALVGLDASLQTLARARPMVPAVTARFAVVQEKRSTLDMALDHLIAHAPAALPEAIELPRSGSPFGSLVV NTDTCTLCLSCVSACPASALQDNPERPQLKFIEKNCVQCGLCAVTCPEDAITLQPRLLLTPQRKEARVLNETQPYQCIRC GKPFGTLKAIESMLGKLAGHAMFQGAAADRLKMCGDCRVIDIYSADNELKITDIR >Mature_694_residues GAALNENLTRHSTLCRREAGAFQKAVQSGEDVVVACTQEKRLFAELGEQTAGATSVVRFVNIRETGGWSKDASAASPKIA ALLAVAHLPDAEPVSTVTYKSAGRLLIVGPLDRAEQVAGLLADALDVTIFSQGVADPASGDFPAQERKYPVISGTGLSLQ GWLGAFEAKWTKDNPIDLDLCTRCNACVAVCPEGAIDLSYQVDSSKCTSHRDCVAVCKVAGAIDFNREAQAATEAFDLVL DLGRQPLITLHAPPQGYFACDASAGLALPGLLPTVVKLRDLVGEFEKPKFFAYKQKLCAHSRNETVGCNACIDICSAGAV SSQKERQQIVVNPNLCIGCGACTTVCPTGALTYAYPRASEQGVRFKTLLATYGRAGGAHPVLLLHSQGAGQQAVEALGRA AQLHKTVQGVPANVIPQALWHTASLGLDVWLSALAFGAEQVAVLVTDEEAPAYLEGLADQMRVAQAILGGLGYAGVHFQL VRVPPGADAQALVGLDASLQTLARARPMVPAVTARFAVVQEKRSTLDMALDHLIAHAPAALPEAIELPRSGSPFGSLVVN TDTCTLCLSCVSACPASALQDNPERPQLKFIEKNCVQCGLCAVTCPEDAITLQPRLLLTPQRKEARVLNETQPYQCIRCG KPFGTLKAIESMLGKLAGHAMFQGAAADRLKMCGDCRVIDIYSADNELKITDIR
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73549; Mature: 73418
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAALNENLTRHSTLCRREAGAFQKAVQSGEDVVVACTQEKRLFAELGEQTAGATSVVRF CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHE VNIRETGGWSKDASAASPKIAALLAVAHLPDAEPVSTVTYKSAGRLLIVGPLDRAEQVAG EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCHHHHHHH LLADALDVTIFSQGVADPASGDFPAQERKYPVISGTGLSLQGWLGAFEAKWTKDNPIDLD HHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCHH LCTRCNACVAVCPEGAIDLSYQVDSSKCTSHRDCVAVCKVAGAIDFNREAQAATEAFDLV HHHCCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LDLGRQPLITLHAPPQGYFACDASAGLALPGLLPTVVKLRDLVGEFEKPKFFAYKQKLCA HHCCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH HSRNETVGCNACIDICSAGAVSSQKERQQIVVNPNLCIGCGACTTVCPTGALTYAYPRAS CCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCEEEECCCHHHHCCCCCEEEECCCCC EQGVRFKTLLATYGRAGGAHPVLLLHSQGAGQQAVEALGRAAQLHKTVQGVPANVIPQAL CCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH WHTASLGLDVWLSALAFGAEQVAVLVTDEEAPAYLEGLADQMRVAQAILGGLGYAGVHFQ HHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE LVRVPPGADAQALVGLDASLQTLARARPMVPAVTARFAVVQEKRSTLDMALDHLIAHAPA EEECCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ALPEAIELPRSGSPFGSLVVNTDTCTLCLSCVSACPASALQDNPERPQLKFIEKNCVQCG CCCHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHC LCAVTCPEDAITLQPRLLLTPQRKEARVLNETQPYQCIRCGKPFGTLKAIESMLGKLAGH CEEEECCCCCEEECCEEEECCCHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH AMFQGAAADRLKMCGDCRVIDIYSADNELKITDIR HHHCCCHHHHHHHCCCCEEEEEECCCCEEEEEECC >Mature Secondary Structure GAALNENLTRHSTLCRREAGAFQKAVQSGEDVVVACTQEKRLFAELGEQTAGATSVVRF CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHE VNIRETGGWSKDASAASPKIAALLAVAHLPDAEPVSTVTYKSAGRLLIVGPLDRAEQVAG EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCHHHHHHH LLADALDVTIFSQGVADPASGDFPAQERKYPVISGTGLSLQGWLGAFEAKWTKDNPIDLD HHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCHH LCTRCNACVAVCPEGAIDLSYQVDSSKCTSHRDCVAVCKVAGAIDFNREAQAATEAFDLV HHHCCCCEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LDLGRQPLITLHAPPQGYFACDASAGLALPGLLPTVVKLRDLVGEFEKPKFFAYKQKLCA HHCCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH HSRNETVGCNACIDICSAGAVSSQKERQQIVVNPNLCIGCGACTTVCPTGALTYAYPRAS CCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCEEEECCCHHHHCCCCCEEEECCCCC EQGVRFKTLLATYGRAGGAHPVLLLHSQGAGQQAVEALGRAAQLHKTVQGVPANVIPQAL CCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH WHTASLGLDVWLSALAFGAEQVAVLVTDEEAPAYLEGLADQMRVAQAILGGLGYAGVHFQ HHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE LVRVPPGADAQALVGLDASLQTLARARPMVPAVTARFAVVQEKRSTLDMALDHLIAHAPA EEECCCCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ALPEAIELPRSGSPFGSLVVNTDTCTLCLSCVSACPASALQDNPERPQLKFIEKNCVQCG CCCHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHC LCAVTCPEDAITLQPRLLLTPQRKEARVLNETQPYQCIRCGKPFGTLKAIESMLGKLAGH CEEEECCCCCEEECCEEEECCCHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH AMFQGAAADRLKMCGDCRVIDIYSADNELKITDIR HHHCCCHHHHHHHCCCCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA