Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is tatB
Identifier: 91786717
GI number: 91786717
Start: 837959
End: 838441
Strand: Direct
Name: tatB
Synonym: Bpro_0815
Alternate gene names: 91786717
Gene position: 837959-838441 (Clockwise)
Preceding gene: 91786716
Following gene: 91786718
Centisome position: 16.11
GC content: 61.28
Gene sequence:
>483_bases ATGATTGATCTTGGCGTCTCCAAAATTGCGTTGATCGGTGCGGTGGCGCTGATTGTGATCGGCCCGGAAAAGCTGCCGCG CGTGGCGCGCACGGTGGGCACGCTGCTGGGCAAGGCGCAGCGCTATGTGGCCGATGTCAAGCAGGAGGTCAACCGGTCCA TGGAGCTCGACGAGCTCAAGAAAATGAAAGACACGGTGGAGGGCGCGGCACGCGACGTCGAGACCTCGATCCAGACCAGT GCCAGTGATTTTGAAAAGTCATGGTCTGACGCCACGGGGAGCGATGCATCAACCGCAACTGACGAGTTGCCCGGCATGGT GGTCTTTCCCGAATACAAGCATCCGAAAAAGAACTGGCGGCTTAAAACCGGCGCTACCCCGCAGTGGTACAAGGCTCGCT CCGGCGTGCGGACCAAGGCGCAGTCTGGCGCCGCCCGCGTGGCACGTTTTCGCCCGCAGTCGGGGCGCTCCTCCTCTTTT TGA
Upstream 100 bases:
>100_bases TGATCCCCTACGCTTGCGCTTCCCATGCCGCGCTGCCCCCGGGGCGGCGCTACCTCTTGGGCGGCCGGGCGGCAAGTCTG GCCTTGTCGTTTGACGCCGC
Downstream 100 bases:
>100_bases TCGTTCCGGTCTTCCTTTCTTTCCGCGCACTCCGGCGCCCTCCATCCAGCGCAAACTCCCTTCATGAGCGACCCCAACAC CGACAAACCCGACGAACTCG
Product: sec-independent translocase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MIDLGVSKIALIGAVALIVIGPEKLPRVARTVGTLLGKAQRYVADVKQEVNRSMELDELKKMKDTVEGAARDVETSIQTS ASDFEKSWSDATGSDASTATDELPGMVVFPEYKHPKKNWRLKTGATPQWYKARSGVRTKAQSGAARVARFRPQSGRSSSF
Sequences:
>Translated_160_residues MIDLGVSKIALIGAVALIVIGPEKLPRVARTVGTLLGKAQRYVADVKQEVNRSMELDELKKMKDTVEGAARDVETSIQTS ASDFEKSWSDATGSDASTATDELPGMVVFPEYKHPKKNWRLKTGATPQWYKARSGVRTKAQSGAARVARFRPQSGRSSSF >Mature_160_residues MIDLGVSKIALIGAVALIVIGPEKLPRVARTVGTLLGKAQRYVADVKQEVNRSMELDELKKMKDTVEGAARDVETSIQTS ASDFEKSWSDATGSDASTATDELPGMVVFPEYKHPKKNWRLKTGATPQWYKARSGVRTKAQSGAARVARFRPQSGRSSSF
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATB_POLSJ (Q12FC1)
Other databases:
- EMBL: CP000316 - RefSeq: YP_547669.1 - STRING: Q12FC1 - GeneID: 4011373 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_0815 - NMPDR: fig|296591.1.peg.3119 - eggNOG: COG1826 - HOGENOM: HBG751935 - OMA: GKAQRYV - ProtClustDB: PRK01919 - BioCyc: PSP296591:BPRO_0815-MONOMER - HAMAP: MF_00237 - InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 - PRINTS: PR01506 - TIGRFAMs: TIGR01410
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 17441; Mature: 17441
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x13396034)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLGVSKIALIGAVALIVIGPEKLPRVARTVGTLLGKAQRYVADVKQEVNRSMELDELK CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH KMKDTVEGAARDVETSIQTSASDFEKSWSDATGSDASTATDELPGMVVFPEYKHPKKNWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCE LKTGATPQWYKARSGVRTKAQSGAARVARFRPQSGRSSSF ECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCH >Mature Secondary Structure MIDLGVSKIALIGAVALIVIGPEKLPRVARTVGTLLGKAQRYVADVKQEVNRSMELDELK CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH KMKDTVEGAARDVETSIQTSASDFEKSWSDATGSDASTATDELPGMVVFPEYKHPKKNWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCE LKTGATPQWYKARSGVRTKAQSGAARVARFRPQSGRSSSF ECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA