Click here to switch to the map view.

The map label for this gene is yrbA [H]

Identifier: 91786703

GI number: 91786703

Start: 827699

End: 827956

Strand: Direct

Name: yrbA [H]

Synonym: Bpro_0801

Alternate gene names: 91786703

Gene position: 827699-827956 (Clockwise)

Preceding gene: 91786702

Following gene: 91786704

Centisome position: 15.92

GC content: 61.63

Gene sequence:

>258_bases
ATGACCAGCGAAGAACTCCAAACCATCATTGCCGCAGGCCTGCCCTGTGAACACATCGAGCTCTCGGGCGACGGCCGGCA
CTGGTATGCCACTATTGTTTCCAGTGCGTTCGAGGGCCTGCGCCTGATCCAGCGTCACCAGCGCGTGTATGCGACGCTGG
GCGGGCGCCTGCAGACCGATGAAGTGCATGCGCTGTCCATGAAAACCTACACGCCCGCGGAGTGGGCGGCCAACAACGCA
AACCAAGCAGCAGACTGA

Upstream 100 bases:

>100_bases
CCAGTCCCGCGGCCCCTGCTGGGATGAAGAGCGCCCACGCTTGCTCACTGCGTGTAGCTCTCGAGGCCTTGCACTGCGAA
CTCTTTTTTGAAACCTTGTT

Downstream 100 bases:

>100_bases
CAACGCATGGACAAACTACTCATCAAGGGCGGCAGATCGCTCGCCGGCACCGTCGATATCTCGGGCGCCAAGAATGCCGC
CCTCCCGGAACTGTGCGCGG

Product: BolA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MTSEELQTIIAAGLPCEHIELSGDGRHWYATIVSSAFEGLRLIQRHQRVYATLGGRLQTDEVHALSMKTYTPAEWAANNA
NQAAD

Sequences:

>Translated_85_residues
MTSEELQTIIAAGLPCEHIELSGDGRHWYATIVSSAFEGLRLIQRHQRVYATLGGRLQTDEVHALSMKTYTPAEWAANNA
NQAAD
>Mature_84_residues
TSEELQTIIAAGLPCEHIELSGDGRHWYATIVSSAFEGLRLIQRHQRVYATLGGRLQTDEVHALSMKTYTPAEWAANNAN
QAAD

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=76, Percent_Identity=35.5263157894737, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9384; Mature: 9252

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEELQTIIAAGLPCEHIELSGDGRHWYATIVSSAFEGLRLIQRHQRVYATLGGRLQTD
CCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EVHALSMKTYTPAEWAANNANQAAD
CEEEEECCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
TSEELQTIIAAGLPCEHIELSGDGRHWYATIVSSAFEGLRLIQRHQRVYATLGGRLQTD
CHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EVHALSMKTYTPAEWAANNANQAAD
CEEEEECCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]