Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yedZ [H]
Identifier: 91786678
GI number: 91786678
Start: 798342
End: 798992
Strand: Direct
Name: yedZ [H]
Synonym: Bpro_0776
Alternate gene names: 91786678
Gene position: 798342-798992 (Clockwise)
Preceding gene: 91786677
Following gene: 91786680
Centisome position: 15.35
GC content: 60.37
Gene sequence:
>651_bases ATGATCTCGCGCCAAAGGCTGTTGCTGCATTCCGCCGCCAAGCCGCTGCTGTTCGTCCTCTGCCTGCTGCCTTTTGTCTG GCTGTTCTACGGCGCGCTGAACAACCAGCTGGGCGCCAATCCGGCTGAGGCGCTGATTCGGGCCACCGGTGACTGGACGC TGCGCTTCATCTGCATTGTGCTGGCGGTCACGCCCTTGAGGGTCATCAGCAACACGCCGGCACTGGCGCGGTTTCGGCGC ATGCTGGGGCTGTTTGCCTATTTTTATGTGGTGACCCACCTGCTGAGCTACAGCTGGTTTGACATGGGTTTCGATGTTCC GGACATCACCAGGGATATCGCCAAGCGGCCCTTTATCCTGGTGGGATTTACCGCGTTTGTGCTGTTGACCCCGCTGGCCG CCACCTCATTCAATGCCGCGATCAAGGCCATGGGGGCCAGGCGCTGGCAATGGCTGCACAAGCTGGTCTACCTGATTGCC GGTTTGGGGCTGCTGCATTTCTTCTGGATGCGCGCGGCCAAGAACAATTTTGCCGAGGTGTTTGTGTATGCCGCCATCAT TGCGCTGCTTCTCGGCTGGCGCGTGCAGCAGTCCCTGAAGAAAAAGAGGCCGCTGCCCATGCCCAGCGGGCGCGTCAAGC TATCGTCCTGA
Upstream 100 bases:
>100_bases GCCAAGAAGCGCAAGACCCTGATGTTCAATGGCTACGAGGCACAGGTGGGCCAGCTTTACGCCGGCATGGATCTCAAGAA GTTTTTCTGAAGGTTCCCAG
Downstream 100 bases:
>100_bases ATGGCTGGCTGCATCGCCTGATGCGGGCGCCCCTGCCAGTGCCCTCGCTGGCTTTATTCGGCCACCAGCTGCTCATGGCG CATCTGGTCCTGCGCATCTT
Product: ferric reductase-like protein transmembrane component-like protein
Products: NA
Alternate protein names: Flavocytochrome yedZ [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIVLAVTPLRVISNTPALARFRR MLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFILVGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIA GLGLLHFFWMRAAKNNFAEVFVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS
Sequences:
>Translated_216_residues MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIVLAVTPLRVISNTPALARFRR MLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFILVGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIA GLGLLHFFWMRAAKNNFAEVFVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS >Mature_216_residues MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIVLAVTPLRVISNTPALARFRR MLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFILVGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIA GLGLLHFFWMRAAKNNFAEVFVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS
Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedZ family [H]
Homologues:
Organism=Escherichia coli, GI1788283, Length=157, Percent_Identity=35.031847133758, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR022837 [H]
Pfam domain/function: PF01794 Ferric_reduct [H]
EC number: NA
Molecular weight: Translated: 24514; Mature: 24514
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH LAVTPLRVISNTPALARFRRMLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFIL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH VGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIAGLGLLHFFWMRAAKNNFAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH FVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH LAVTPLRVISNTPALARFRRMLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFIL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH VGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIAGLGLLHFFWMRAAKNNFAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH FVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA