Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yedZ [H]

Identifier: 91786678

GI number: 91786678

Start: 798342

End: 798992

Strand: Direct

Name: yedZ [H]

Synonym: Bpro_0776

Alternate gene names: 91786678

Gene position: 798342-798992 (Clockwise)

Preceding gene: 91786677

Following gene: 91786680

Centisome position: 15.35

GC content: 60.37

Gene sequence:

>651_bases
ATGATCTCGCGCCAAAGGCTGTTGCTGCATTCCGCCGCCAAGCCGCTGCTGTTCGTCCTCTGCCTGCTGCCTTTTGTCTG
GCTGTTCTACGGCGCGCTGAACAACCAGCTGGGCGCCAATCCGGCTGAGGCGCTGATTCGGGCCACCGGTGACTGGACGC
TGCGCTTCATCTGCATTGTGCTGGCGGTCACGCCCTTGAGGGTCATCAGCAACACGCCGGCACTGGCGCGGTTTCGGCGC
ATGCTGGGGCTGTTTGCCTATTTTTATGTGGTGACCCACCTGCTGAGCTACAGCTGGTTTGACATGGGTTTCGATGTTCC
GGACATCACCAGGGATATCGCCAAGCGGCCCTTTATCCTGGTGGGATTTACCGCGTTTGTGCTGTTGACCCCGCTGGCCG
CCACCTCATTCAATGCCGCGATCAAGGCCATGGGGGCCAGGCGCTGGCAATGGCTGCACAAGCTGGTCTACCTGATTGCC
GGTTTGGGGCTGCTGCATTTCTTCTGGATGCGCGCGGCCAAGAACAATTTTGCCGAGGTGTTTGTGTATGCCGCCATCAT
TGCGCTGCTTCTCGGCTGGCGCGTGCAGCAGTCCCTGAAGAAAAAGAGGCCGCTGCCCATGCCCAGCGGGCGCGTCAAGC
TATCGTCCTGA

Upstream 100 bases:

>100_bases
GCCAAGAAGCGCAAGACCCTGATGTTCAATGGCTACGAGGCACAGGTGGGCCAGCTTTACGCCGGCATGGATCTCAAGAA
GTTTTTCTGAAGGTTCCCAG

Downstream 100 bases:

>100_bases
ATGGCTGGCTGCATCGCCTGATGCGGGCGCCCCTGCCAGTGCCCTCGCTGGCTTTATTCGGCCACCAGCTGCTCATGGCG
CATCTGGTCCTGCGCATCTT

Product: ferric reductase-like protein transmembrane component-like protein

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIVLAVTPLRVISNTPALARFRR
MLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFILVGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIA
GLGLLHFFWMRAAKNNFAEVFVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS

Sequences:

>Translated_216_residues
MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIVLAVTPLRVISNTPALARFRR
MLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFILVGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIA
GLGLLHFFWMRAAKNNFAEVFVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS
>Mature_216_residues
MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIVLAVTPLRVISNTPALARFRR
MLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFILVGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIA
GLGLLHFFWMRAAKNNFAEVFVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=157, Percent_Identity=35.031847133758, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 24514; Mature: 24514

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH
LAVTPLRVISNTPALARFRRMLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFIL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
VGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIAGLGLLHFFWMRAAKNNFAEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
FVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISRQRLLLHSAAKPLLFVLCLLPFVWLFYGALNNQLGANPAEALIRATGDWTLRFICIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHH
LAVTPLRVISNTPALARFRRMLGLFAYFYVVTHLLSYSWFDMGFDVPDITRDIAKRPFIL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
VGFTAFVLLTPLAATSFNAAIKAMGARRWQWLHKLVYLIAGLGLLHFFWMRAAKNNFAEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
FVYAAIIALLLGWRVQQSLKKKRPLPMPSGRVKLSS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA