Definition | Escherichia coli UTI89 chromosome, complete genome. |
---|---|
Accession | NC_007946 |
Length | 5,065,741 |
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The map label for this gene is yrfG [H]
Identifier: 91212871
GI number: 91212871
Start: 3781292
End: 3782005
Strand: Direct
Name: yrfG [H]
Synonym: UTI89_C3897
Alternate gene names: 91212871
Gene position: 3781292-3782005 (Clockwise)
Preceding gene: 91212870
Following gene: 91212872
Centisome position: 74.64
GC content: 50.98
Gene sequence:
>714_bases ATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATAC CGTTCTGCTGGATATGGACGGCACGTTGCTTGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACAT GGGGCGCGAAAAACGGAGTTACGCCACAGGAAGCGATGGAATATATGCGCCAGCAATATCACGACGTACAGCATACGCTA AACTGGTACTGTCTTGATTACTGGAGTGAGCAACTGGGTCTGGATATCTGTGCGATGACCACCGAGATGGGACCGCGTGC CGTACTGCGTGAAGATACCATTCCGTTTCTTGAGGCACTGAAAGCCAGCGGTAAACAGCGAATTTTGCTCACCAATGCGC ATCCGCACAACCTGGCGGTAAAACTTGAGCATACCGGTCTGGACGCACACCTTGATTTATTACTTTCCACCCACACATTT GGTTATCCGAAAGAGGATCAGCGGTTATGGCATGCGGTGGCCGAAGCTACGGGTCTTAAAGCTGAAAGAACGCTGTTTAT TGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGTGTGACTAATCCTGACTCCG GGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGA
Upstream 100 bases:
>100_bases CGCATGATGAAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATA ACACGTTTGCGCGGCAGGTT
Downstream 100 bases:
>100_bases AGGAGATGCCATGAAAGAAAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCC GCGCGCTGGCCCGTGAAATG
Product: putative phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLPCRANCFTLEISLMHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTL NWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF GYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM
Sequences:
>Translated_237_residues MLPCRANCFTLEISLMHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTL NWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF GYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM >Mature_237_residues MLPCRANCFTLEISLMHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTL NWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF GYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082259, Length=222, Percent_Identity=100, Blast_Score=464, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 27092; Mature: 27092
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPCRANCFTLEISLMHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGV CCCCCCCEEEEEEEEEEEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHCCHHCCCCCCC TPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCHHHHHHH KASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLK HCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC AERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM CCEEEEECCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MLPCRANCFTLEISLMHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGV CCCCCCCEEEEEEEEEEEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHCCHHCCCCCCC TPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHCCCHHHHHHH KASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLK HCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC AERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM CCEEEEECCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]