| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yhbW [H]
Identifier: 91212578
GI number: 91212578
Start: 3523283
End: 3524290
Strand: Direct
Name: yhbW [H]
Synonym: UTI89_C3587
Alternate gene names: 91212578
Gene position: 3523283-3524290 (Clockwise)
Preceding gene: 91212577
Following gene: 91212580
Centisome position: 69.55
GC content: 56.45
Gene sequence:
>1008_bases ATGACTGATAAAACCATTGCGTTTTCGTTACTCGATCTGGCCCCCATTCCCGAAGGTTCTTCAGCGCGAGATGCGTTCTC CCACTCTCTCGATCTCGCCCGTCTGGCTGAAAAGCGCGGCTATCATCGCTACTGGCTGGCGGAACACCACAATATGACCG GCATTGCCAGTGCTGCAACGTCGGTGTTAATTGGCTATCTGGCGGCGAATACCACCACGCTGCATCTGGGGTCTGGCGGC GTGATGTTGCCTAACCACTCACCATTGGTGATCGCCGAACAGTTCGGCACGCTCAATACGCTCTATCCGGGGCGAATCGA TTTGGGGCTGGGTCGTGCACCGGGTAGCGATCAGCGAACCATGATGGCGCTGCGTCGTCATATGAGCGGCGATATTGATA ATTTCCCCCGCGATGTCGCGGAACTGGTGGACTGGTTTGACGCCCGCGATCCCAATCCGCATGTGCGCCCGGTACCAGGC TATGGCGAGAAAATCCCCGTGTGGTTGTTAGGCTCCAGCCTTTACAGCGCGCAACTGGCGGCGCAGCTTGGTCTGCCGTT TGCGTTTGCCTCACACTTCGCGCCGGATATGTTGTTCCAGGCGCTGCATCTTTATCGCAGCAACTTCAAACCGTCGGCAC GGTTGGAGAAACCGTATGCGATGGTGTGCATCAATATTATCGCCGCCGACAGCAACCGCGATGCCGAATTCCTGTTTACC TCAATGCAGCAAGCCTTTGTGAAGCTGCGCCGCGGCGAAACCGGGCAACTGCCGCCACCGATTCAAAATATGGATCAGTT CTGGTCGCCGTCCGAACAGTATGGTGTGCAGCAGGCGCTGAGTATGTCGCTGGTGGGCGATAAAGCGAAAGTGCGTCATG GCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTTAACGGGCAGATTTTCGACCACCAGGCGCGCCTG CATTCGTTTGAACTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAG
Upstream 100 bases:
>100_bases GGCTGGAGCTGCAAGCGTAAGTATATAGCTCACTTTGTTAACAACTTTAACTACTCTTTAATGCAGTATTAAAGATTAAT CGGTAACAAAGTGAGCTGTT
Downstream 100 bases:
>100_bases TATGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACGTAGGCCTGATAAGCGAAGCGCATCAGGCATT GTGTAGGCAGCAGAAATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTDKTIAFSLLDLAPIPEGSSARDAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGG VMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFT SMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARL HSFELAMDVKEELLG
Sequences:
>Translated_335_residues MTDKTIAFSLLDLAPIPEGSSARDAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGG VMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFT SMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARL HSFELAMDVKEELLG >Mature_334_residues TDKTIAFSLLDLAPIPEGSSARDAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGV MLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGY GEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFTS MQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLH SFELAMDVKEELLG
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=335, Percent_Identity=99.7014925373134, Blast_Score=690, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 37116; Mature: 36985
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKTIAFSLLDLAPIPEGSSARDAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAAT CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCHHHHHHHH SVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRT HHHHHHHHCCCEEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHH MMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEKIPVWLLGSSLYSAQLA HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH AQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFT HHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHH SMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILR HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG HCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDKTIAFSLLDLAPIPEGSSARDAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAAT CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCHHHHHHHH SVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRT HHHHHHHHCCCEEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCHHH MMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEKIPVWLLGSSLYSAQLA HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH AQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFT HHHCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHH SMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILR HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG HCCCCCEEECCEEECCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]