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The map label for this gene is agaD [H]

Identifier: 91212562

GI number: 91212562

Start: 3510630

End: 3511490

Strand: Direct

Name: agaD [H]

Synonym: UTI89_C3571

Alternate gene names: 91212562

Gene position: 3510630-3511490 (Clockwise)

Preceding gene: 91212561

Following gene: 91212563

Centisome position: 69.3

GC content: 48.78

Gene sequence:

>861_bases
ATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATGAAGAAGAGGACTACAGCAATGGGATCTGA
AATCAGTAAAAAAGATATCACCCGTCTGGGCTTTCGTTCGTCACTGCTACAAGCAAGCTTTAACTACGAAAGGATGCAGG
CGGGCGGTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCCTAAGCGCGGCGATG
AAAGATAACCTCGAATTTATTAATACCCACCCTAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAA
AGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCGCTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCT
GGTTTACCTTGTTGCCAATTATGGCGGGGATTTGCTCATCGTTTGCCAGTCAGGGGAACCTGTTGGGACCGATTTTGTTT
TTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCTATCGA
TAAAGTGCGAGAGAACTCGCAGATGATTGCTCGTTCGGCAACTATCCTCGGGATCACAGTAATCGGCGGGCTGATCGCTT
CGTATGTGCATATTAACGTGGTGACGTCGTTTGCCATCGACAGTACCCACAGCGTCGCACTGCAACAGGATTTCTTCGAT
AAAGTCTTCCCGAATATTTTACCGATGGCCTACACCCTGCTGATGTATTACTTCCTGCGGGTGAAAAAAGCGCATCCGGT
GCTGTTAATCGGCGTGACGTTTGTTCTTTCTATTGTTTGTTCTGCATTCGGCATTTTGTAA

Upstream 100 bases:

>100_bases
TACCTGATCGCCGGTTTCCTGTTTGTTTGCTACATCCAGGTCAGCAACCTGTTGCCGGTTGCCGTACTGGGCGCAGGCTT
TGCGGTGTATGAGTTTTTCA

Downstream 100 bases:

>100_bases
ATGGAACGAGGCACCGCGTCTGGCGGTGCCTCTTTACTTAAGGAATTTCATCCTGTGCAAACCCTTCAACAAGTTGAAAA
CTATACGGCGTTAAGTGAAC

Product: PTS system N-acetylgalactosamine-specific transporter subunit IID

Products: NA

Alternate protein names: EIID-Aga; PTS system N-acetylgalactosamine-specific EIID component [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRNPGSKRNRSPLPVKMKKRTTAMGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKKIYKDDKPGLSAAM
KDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPIAGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILF
FAVYLLIFFLRVGWTHVGYSVGVKAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFD
KVFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL

Sequences:

>Translated_286_residues
MRNPGSKRNRSPLPVKMKKRTTAMGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKKIYKDDKPGLSAAM
KDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPIAGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILF
FAVYLLIFFLRVGWTHVGYSVGVKAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFD
KVFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL
>Mature_286_residues
MRNPGSKRNRSPLPVKMKKRTTAMGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKKIYKDDKPGLSAAM
KDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPIAGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILF
FAVYLLIFFLRVGWTHVGYSVGVKAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFD
KVFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3716

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIID domain [H]

Homologues:

Organism=Escherichia coli, GI1789529, Length=263, Percent_Identity=99.6197718631179, Blast_Score=533, Evalue=1e-153,
Organism=Escherichia coli, GI1788122, Length=279, Percent_Identity=34.4086021505376, Blast_Score=164, Evalue=7e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004704
- InterPro:   IPR018405 [H]

Pfam domain/function: PF03613 EIID-AGA [H]

EC number: NA

Molecular weight: Translated: 31611; Mature: 31611

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS51108 PTS_EIID

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNPGSKRNRSPLPVKMKKRTTAMGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWA
CCCCCCCCCCCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH
MLPILKKIYKDDKPGLSAAMKDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVA
HHHHHHHHHCCCCCCHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LFGPIAGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYS
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVKAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KVFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNPGSKRNRSPLPVKMKKRTTAMGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWA
CCCCCCCCCCCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHH
MLPILKKIYKDDKPGLSAAMKDNLEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVA
HHHHHHHHHCCCCCCHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LFGPIAGIGDAIFWFTLLPIMAGICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYS
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGVKAIDKVRENSQMIARSATILGITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KVFPNILPMAYTLLMYYFLRVKKAHPVLLIGVTFVLSIVCSAFGIL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10931310; 9278503; 8932697 [H]