| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is agaS [H]
Identifier: 91212558
GI number: 91212558
Start: 3507197
End: 3508351
Strand: Direct
Name: agaS [H]
Synonym: UTI89_C3567
Alternate gene names: 91212558
Gene position: 3507197-3508351 (Clockwise)
Preceding gene: 91212557
Following gene: 91212559
Centisome position: 69.23
GC content: 56.88
Gene sequence:
>1155_bases ATGCCAGAAAATTACACCCCTGCTGCTGCCGCAACCGGTACATGGACTGAAGAAGAGATCCGCCATCAGCCTCGCGCATG GATCCGTTCACTCACCAACATCGACGCGCTACGTTCCGCGCTCAATAACTTCCTTGAACCGTTACTGCGCAAAGAGAATC TGCGGATCATCCTGACCGGAGCCGGAACCTCGGCATTTATCGGTGACATCATCGCGCCGTGGCTCGCCAGCCATACCGGT AAAAACTTCAGCGCCGTACCGACCACCGATCTGGTCACTAATCCGATGGACTACCTGAATCCAGCTCATCCGCTGCTGTT GATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCCGCCGTGGAACTGGCAAATCAATTTGTACCAGAATGCT ATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGACAACGCGTTTGCCCTGCTG ATGCCCGCAGAAACGCACGATCGCGGCTTCGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTT CGCACCTGAGACGATCAACAGCCAAACCTTCCGCGATGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATT TCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGCAGCGGTGGCTTACAGGGCGCAGCACGC GAGTCGGCGCTGAAAGTGCTGGAACTGACAGCGGGTAAACTGGCGGCCTTCTATGATTCCCCGACCGGATTCCGTCATGG CCCGAAATCGCTGGTCGATAACGAAACGCTGGTGGTGGTGTTTGTCTCCAGCCACCCTTACACCCGTCAGTATGATCTTG ATCTGCTGGCAGAACTCCGCCGCGATAACCAGGCAATGCGCGTAATCGCCATCGCCGCGGAAAGCAACGACGTTATTGCC GCCGGTCCACATATCATCCTGCCGCCGTCCCGTCACTTTATCGACGTTGAGCAGGCATTTTGCTTCCTGATGTACGCCCA GACATTTGCACTGATGCAGTCGCTGCACATGGGTAATACGCCGGATACCCCATCAGCCAGTGGCACCGTTAACCGCGTGG TGCAAGGCGTAATCATTCATCCGTGGCAGGCATAA
Upstream 100 bases:
>100_bases TAAATTTTAACCAACGAAAGAAATCACCAAGTGAAATGAAACGAAAGGCAAGCGAAAGCGACAACGCCGACGTCAAGTTC ATCAGACTAAGGATTGAGTT
Downstream 100 bases:
>100_bases GAGGATCGCATTATGAGCATTATCTCCACCAAATATCTGTTACAGGACGCCCAGGCCAATGGCTACGCGGTGCCTGCCTT TAACATTCATAACGCCGAGA
Product: putative tagatose-6-phosphate ketose/aldose isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTG KNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALL MPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAAR ESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESNDVIA AGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA
Sequences:
>Translated_384_residues MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTG KNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALL MPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAAR ESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESNDVIA AGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA >Mature_383_residues PENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGK NFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLM PAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARE SALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESNDVIAA GPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA
Specific function: May be a tagatose-6-phosphate ketose/aldose isomerase [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Escherichia coli, GI1789525, Length=384, Percent_Identity=98.9583333333333, Blast_Score=791, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001347 - InterPro: IPR014180 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: 5.-.-.- [C]
Molecular weight: Translated: 41809; Mature: 41678
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTG CCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC AGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESV CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHCCCCCCEEEEEECCCCCCCHHH AAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMM HHHHHHHHHCHHHEECCEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHHHHH ASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAAR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEECCCCCCCHHH ESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNETLVVVFVSSHPYTRQYDLDLLAELR HHHHHHHHHHHCHHEEEECCCCCCCCCCHHHCCCCEEEEEEECCCCCCEECCHHHHHHHH RDNQAMRVIAIAAESNDVIAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNT CCCCEEEEEEEEECCCCEEEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCC PDTPSASGTVNRVVQGVIIHPWQA CCCCCCCCHHHHHHCCEEECCCCC >Mature Secondary Structure PENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTG CCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC AGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESV CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHCCCCCCEEEEEECCCCCCCHHH AAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMM HHHHHHHHHCHHHEECCEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHHHHH ASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAAR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEECCCCCCCHHH ESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNETLVVVFVSSHPYTRQYDLDLLAELR HHHHHHHHHHHCHHEEEECCCCCCCCCCHHHCCCCEEEEEEECCCCCCEECCHHHHHHHH RDNQAMRVIAIAAESNDVIAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNT CCCCEEEEEEEEECCCCEEEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCC PDTPSASGTVNRVVQGVIIHPWQA CCCCCCCCHHHHHHCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 8932697 [H]