| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is agaV [H]
Identifier: 91212553
GI number: 91212553
Start: 3503099
End: 3503608
Strand: Direct
Name: agaV [H]
Synonym: UTI89_C3562
Alternate gene names: 91212553
Gene position: 3503099-3503608 (Clockwise)
Preceding gene: 91212552
Following gene: 91212554
Centisome position: 69.15
GC content: 50.2
Gene sequence:
>510_bases GTGAAGGCCAATAAGCAAAACAAAGAGGAACACGCTATGCCAAATATTGTTTTAAGTCGGATTGATGAACGCTTGATTCA CGGTCAGGTCGGCGTTCAGTGGGTCGGATTTGCGGGGGCAAATCTGGTGCTGGTAGCCAACGACGAGGTTGCCGAAGATC TGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGTTGCAAAAAGTCATCGAT AACATTCATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCGGCCGATTTCCTGACGCTGGTGAAAGG TGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAGCAACAAATCGCCAAAACGGTTTCTG TGGATGCGGGTGATATCGCAGCATTTAACGACCTGAAAGCCGCTGGGGTGGAATGCTTCGTTCAGGGCGTCCCGACAGAG CCTGCAGTGGACCTCTTTAAATTACTTTGA
Upstream 100 bases:
>100_bases CTGCAGTACGTGAAAGTTCGCTCCGGCGAGCTGCAGCCAACGCCACGGGAACTCATTATCAACCATATTCAGGACATCCT GGCGCAGTACCACACAGCCT
Downstream 100 bases:
>100_bases GGGATTCATCATGGAAATCAGTCTGTTGCAGGCATTCGCGTTGGGCATTATCGCCTTTATCGCTGGCCTGGATATGTTTA ACGGCTTAACCCATATGCAC
Product: PTS system N-acetylgalactosamine-specific transporter subunit IIB
Products: NA
Alternate protein names: EIIB-Aga'; PTS system N-acetylgalactosamine-specific EIIB component 2 [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDLVQQNLMEMVLAEGIAVRFWTLQKVID NIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTE PAVDLFKLL
Sequences:
>Translated_169_residues MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDLVQQNLMEMVLAEGIAVRFWTLQKVID NIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTE PAVDLFKLL >Mature_169_residues MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDLVQQNLMEMVLAEGIAVRFWTLQKVID NIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTE PAVDLFKLL
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI87082217, Length=157, Percent_Identity=98.7261146496815, Blast_Score=314, Evalue=2e-87, Organism=Escherichia coli, GI1789527, Length=146, Percent_Identity=47.945205479452, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI1788120, Length=157, Percent_Identity=38.2165605095541, Blast_Score=107, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 18482; Mature: 18482
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDLVQQNLM CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHH EMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMH HHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCEE YANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL ECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHC >Mature Secondary Structure MKANKQNKEEHAMPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDLVQQNLM CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHH EMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMH HHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCEE YANGKQQIAKTVSVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL ECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 8932697 [H]