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The map label for this gene is kpsC [H]

Identifier: 91212358

GI number: 91212358

Start: 3293837

End: 3295864

Strand: Direct

Name: kpsC [H]

Synonym: UTI89_C3366

Alternate gene names: 91212358

Gene position: 3293837-3295864 (Clockwise)

Preceding gene: 91212357

Following gene: 91212359

Centisome position: 65.02

GC content: 51.97

Gene sequence:

>2028_bases
ATGATTGGCATTTACTCGCCTGGCATCTGGCGTATTCCGCATCTGGAGAAATTTCTGGCGCAACCGTGCCAGAAACTTTC
TCTGCTGCGCCCTGTTCCGCAAGAAGTTAATGCTATCGCCGTGTGGGGACATCGTCCCAGCGCGGCGAAACCAGTCGCCA
TCGCCAAAGCAGCGGGAAAACCCGTCATTCGTCTGGAAGATGGATTTGTGCGTTCGCTGGATCTTGGCGTCAATGGCGAG
CCGCCGCTTTCTCTGGTGGTGGATGATTGTGGCATTTACTACGATGCCAGCAAGCCTTCGGCGCTGGAGAAACTGGTACA
GGATAAAGCCGGAAATACAGCTCTGATAAGCCAGGCCAGAGAAGCGATGCACACCATCGTGACCGGGGATATGTCGAAAT
ATAATCTGGCGCCTGCGTTTGTGGCTGATGAGTCAGAACGTACAAACATCGTTCTGGTTGTCGATCAGACATTTAATGAT
ATGTCAGTGACGTATGGCAATGCTGGCCCGCATGAGTTTGCTGCCATGCTGGAAGCCGCGATGGCGGAAAATCCTCAAGC
CGAAATTTGGGTGAAGGTGCACCCAGATGTACTGGAAGGAAAGAAAACAGGTTATTTCGCCGATCTGCGCGCCACGCAAC
GAGTACGTTTAATTGCCGAGAATGTCAGCCCGCAGTCGCTGTTGCGACACGTTTCCCGGGTTTACGTCGTGACCTCCCAA
TACGGCTTTGAAGCCTTGCTGGCAGGAAAACCAGTAACATGTTTCGGCCAGCCCTGGTATGCAAGCTGGGGCTTAACCGA
CGATCGCCATCCGCAGTCCGCTTTGTTATCTGCCCGACGCGGTTCTGCCACGCTGGAGGAACTTTTTGCCGCTGCATACC
TGCGTTACTGTCGCTATATCGATCCGCAAACGGGAGAAGTAAGCGATCTATTTACCGTGCTGCAATGGCTGCAATTACAA
CGTCGACATCTGCAACAGCGTAATGGTTATTTATGGGCGCCAGGCTTAACGCTGTGGAAGTCGGCGATCCTGAAACCCTT
CTTACGAACGCCAACAAACCGGCTGAGTTTTTCACGTCGCTGTACTGCGGCGAGCGCCTGCGTGGTATGGGGTGTAAAGG
GGGAACAGCAATGGCGAGCCGAAGCGCAGCGAAAATCACTGCCATTATGGCGAATGGAAGATGGTTTTCTGCGTTCATCC
GGACTTGGCTCTGACCTGCTGCCGCCGCTATCGTTGGTACTGGATAAACGCGGGATCTACTATGACGCCACGCGCCCCAG
CGACCTGGAAGTGCTGCTTAATCATAGCCAGCTAACGCTGGCGCAGCAGATGCGAGCTGAAAAATTACGCCAGCGACTGG
TTGAAAGTAAACTGAGCAAGTACAACCTGGGAGCCGATTTCTCTCTACCAGCCAAAGCCAAAGATAAAAAAGTTATCCTG
GTGCCGGGTCAGGTAGAGGACGATGCCTCTATTAAAACAGGCACAGTCTCGATTAAGAGCAACCTTGAGTTATTACGCAC
AGTACGCGAGCGTAATCCGCACGCCTACATTGTTTATAAACCGCACCCGGATGTACTGGTGGGGAATCGCAAGGGCGATA
TTCCGGCAGAACTGACTGCTGAACTCGCTGATTATCAGGCACTGGACGCCGATATTATTCAATGCATTCAGCGCGCAGAT
GAAGTGCATACCATGACGTCGCTGTCGGGGTTTGAAGCGTTATTACATGGCAAGCACGTACATTGTTACGGCCTGCCCTT
CTATGCCGGTTGGGGTTTAACCGTCGATGAACATCGTTGCCCGCGTCGCGAGCGAAAATTAACGTTAGCGGATTTGATCT
ATCAGGCGCTGATTGTTTATCCAACCTATATCCACCCAACACGGCTACAACCTATTACGGTTGAAGAGGCGGCGGAATAT
TTGATCCAGACACCGCGCAAGCCGATGTTTATTACCCGAAAAAAAGCGGGGCGAGTAATACGTTATTACCGCAAATTAAT
TATGTTCTGTAAGGTCAGATTTGGCTAA

Upstream 100 bases:

>100_bases
TCCGCACATTTGAGGTTGCCGCAACCGGTCCGGGCGTCGACACCCCAGCATGCCTGGAAAAAGTGCGCGCCCTGATGGCA
CAGGAACTGGCTGAAAACGC

Downstream 100 bases:

>100_bases
ACAATTTCATAGTTGACTATTACGCAAATTATTTATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATC
TGCTATTGCAGGGGCCGATG

Product: capsule polysaccharide export protein KpsC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE
PPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFND
MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQ
RRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSS
GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRAD
EVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEY
LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG

Sequences:

>Translated_675_residues
MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE
PPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFND
MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQ
RRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSS
GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRAD
EVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEY
LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG
>Mature_675_residues
MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE
PPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFND
MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSDLFTVLQWLQLQ
RRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSS
GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTAELADYQALDADIIQCIQRAD
EVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRCPRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEY
LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG

Specific function: Unknown

COG id: COG3563

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti lipopolysaccharide processing protein lpsZ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 75838; Mature: 75838

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCC
PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
CEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCHHHHHHHH
EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
HHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHH
MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
HHCCCCEEEEEEECCHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECC
YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
CCCEEEECCCCEEECCCCCEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHH
CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
CCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCE
YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
EECCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE
VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
ECCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCHHHHH
ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCEEHHCCC
PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEHHHHHHHH
RYYRKLIMFCKVRFG
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVNAIAVWGHRPSAAKPVAIAKAAGK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCC
PVIRLEDGFVRSLDLGVNGEPPLSLVVDDCGIYYDASKPSALEKLVQDKAGNTALISQAR
CEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCHHHHHHHH
EAMHTIVTGDMSKYNLAPAFVADESERTNIVLVVDQTFNDMSVTYGNAGPHEFAAMLEAA
HHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHH
MAENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ
HHCCCCEEEEEEECCHHHCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECC
YGFEALLAGKPVTCFGQPWYASWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYI
CCCEEEECCCCEEECCCCCEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
DPQTGEVSDLFTVLQWLQLQRRHLQQRNGYLWAPGLTLWKSAILKPFLRTPTNRLSFSRR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHH
CTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSSGLGSDLLPPLSLVLDKRGIY
CCCCCEEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCE
YDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAKAKDKKVIL
EECCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE
VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIVYKPHPDVLVGNRKGDIPAELTA
ECCCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCHHHHH
ELADYQALDADIIQCIQRADEVHTMTSLSGFEALLHGKHVHCYGLPFYAGWGLTVDEHRC
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCCEEHHCCC
PRRERKLTLADLIYQALIVYPTYIHPTRLQPITVEEAAEYLIQTPRKPMFITRKKAGRVI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEHHHHHHHH
RYYRKLIMFCKVRFG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8397187; 7875563 [H]