| Definition | Escherichia coli UTI89 chromosome, complete genome. |
|---|---|
| Accession | NC_007946 |
| Length | 5,065,741 |
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The map label for this gene is yggG [H]
Identifier: 91212317
GI number: 91212317
Start: 3258460
End: 3259437
Strand: Direct
Name: yggG [H]
Synonym: UTI89_C3324
Alternate gene names: 91212317
Gene position: 3258460-3259437 (Clockwise)
Preceding gene: 91212315
Following gene: 91212322
Centisome position: 64.32
GC content: 51.74
Gene sequence:
>978_bases TTGGGCTACGCCGGAAAATTTGCCAACAATTTACCGCAAGCCGCTCGTCATGTACATGGAACATCCTTTTGCCGCTTCAG AAATCTCTGGATCATGCTCGCATGTTGCGCAATCCACTCGCCCGTCCGCTGCGCTTTTCCTTATACTGAGACTGAGCGTC GATTCACCTGCAAACGGCGCATTTTTAGAATAATCCTGACCTTGTGCGGAAGAGAAAACATGAAAATTCGCGCCTTATTG GTAGCAATGAGCGTGGCTACGGTGCTGACCGGTTGCCAGAATATGGACTCCAGTGGACTGCTCTCATCAGGAGCGGAAGC TTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAAAACTGAGCGATCAGGCATGCCAGGAGATGGACAGCAAAGCGA CGATTGCGCCAGCCAATAGCGAATATGCTAGACGTCTGACGACAATTTCTCGCGCGTTAGGCGATAACATCAACGGTCAG CCGGTGAATTACAAAGTGTATATGGCGAAGGATGTGAACGCCTTTGCAATGGCTAACGGCTGTATCCGCGTCTATAGCGG GCTGATGGATATGATGACGGATAACGAAGTCGAAGCGGTGCTCGGTCACGAAATGGGGCACGTGGCATTAGGCCATGTGA AGAAAGGAATGCAGGTAGCACTTGGTACAAACGCAATTCGCGTTGCGGCGGCCTCTGCAGGCGGAATTGTCGGCAGTTTG TCACAATCACAACTGGGAGACCTGGGCGAAAAGCTAGTCAATTCGCAATTTACCCAACGTCAGGAATCAGAGGCCGATGA TTACTCCTACGATTTGCTGCGCCAACGCGGTATCAGCCCGGCAGGTCTTGCCACCAGCTTTGAAAAACTGGCGAAGCTGG AAGAAGGCCGTCAAAGCTCAATGTTTGACGACCATCCAGCATCCGCCGAACGCGCCCAGCATATTCGCGATCGTATGAGC GCGGATGGAGTTAAGTAA
Upstream 100 bases:
>100_bases CAGCGCACGAATAGCATTGGCAAGCTCTTTACGTGAGGACATTTTGACTCCAGATCGGATGATGAAGGGCACGCCCTTAA CGACTTGACGACAGCGCGTT
Downstream 100 bases:
>100_bases AGCCAGGTAGTGCCGAACGTAGGTCGGATAAGGCGTTCACGCCGCATCTGACAAGAATGGCACATTTGTTACTCCGTGCG CATTGCCGGATGCGATGCTG
Product: putative metalloprotease YggG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MGYAGKFANNLPQAARHVHGTSFCRFRNLWIMLACCAIHSPVRCAFPYTETERRFTCKRRIFRIILTLCGRENMKIRALL VAMSVATVLTGCQNMDSSGLLSSGAEAFQAYSLSDAQVKKLSDQACQEMDSKATIAPANSEYARRLTTISRALGDNINGQ PVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVLGHEMGHVALGHVKKGMQVALGTNAIRVAAASAGGIVGSL SQSQLGDLGEKLVNSQFTQRQESEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQHIRDRMS ADGVK
Sequences:
>Translated_325_residues MGYAGKFANNLPQAARHVHGTSFCRFRNLWIMLACCAIHSPVRCAFPYTETERRFTCKRRIFRIILTLCGRENMKIRALL VAMSVATVLTGCQNMDSSGLLSSGAEAFQAYSLSDAQVKKLSDQACQEMDSKATIAPANSEYARRLTTISRALGDNINGQ PVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVLGHEMGHVALGHVKKGMQVALGTNAIRVAAASAGGIVGSL SQSQLGDLGEKLVNSQFTQRQESEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQHIRDRMS ADGVK >Mature_324_residues GYAGKFANNLPQAARHVHGTSFCRFRNLWIMLACCAIHSPVRCAFPYTETERRFTCKRRIFRIILTLCGRENMKIRALLV AMSVATVLTGCQNMDSSGLLSSGAEAFQAYSLSDAQVKKLSDQACQEMDSKATIAPANSEYARRLTTISRALGDNINGQP VNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVLGHEMGHVALGHVKKGMQVALGTNAIRVAAASAGGIVGSLS QSQLGDLGEKLVNSQFTQRQESEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQHIRDRMSA DGVK
Specific function: Seems to regulate the expression of speB [H]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI87082185, Length=252, Percent_Identity=95.2380952380952, Blast_Score=498, Evalue=1e-142, Organism=Escherichia coli, GI87081800, Length=252, Percent_Identity=55.5555555555556, Blast_Score=290, Evalue=6e-80, Organism=Escherichia coli, GI1788840, Length=177, Percent_Identity=28.2485875706215, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 35466; Mature: 35335
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYAGKFANNLPQAARHVHGTSFCRFRNLWIMLACCAIHSPVRCAFPYTETERRFTCKRR CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH IFRIILTLCGRENMKIRALLVAMSVATVLTGCQNMDSSGLLSSGAEAFQAYSLSDAQVKK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHH LSDQACQEMDSKATIAPANSEYARRLTTISRALGDNINGQPVNYKVYMAKDVNAFAMANG HHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHH CIRVYSGLMDMMTDNEVEAVLGHEMGHVALGHVKKGMQVALGTNAIRVAAASAGGIVGSL HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEEEECCCCCCHHCC SQSQLGDLGEKLVNSQFTQRQESEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSS CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHC MFDDHPASAERAQHIRDRMSADGVK CCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GYAGKFANNLPQAARHVHGTSFCRFRNLWIMLACCAIHSPVRCAFPYTETERRFTCKRR CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH IFRIILTLCGRENMKIRALLVAMSVATVLTGCQNMDSSGLLSSGAEAFQAYSLSDAQVKK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHH LSDQACQEMDSKATIAPANSEYARRLTTISRALGDNINGQPVNYKVYMAKDVNAFAMANG HHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHH CIRVYSGLMDMMTDNEVEAVLGHEMGHVALGHVKKGMQVALGTNAIRVAAASAGGIVGSL HHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCEEEECCCEEEEEECCCCCCHHCC SQSQLGDLGEKLVNSQFTQRQESEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSS CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHC MFDDHPASAERAQHIRDRMSADGVK CCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2153656; 9278503; 1310091 [H]