Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is hmo [H]
Identifier: 91206390
GI number: 91206390
Start: 113984
End: 114193
Strand: Direct
Name: hmo [H]
Synonym: UTI89_P145
Alternate gene names: 91206390
Gene position: 113984-114193 (Clockwise)
Preceding gene: 91206389
Following gene: NA
Centisome position: 99.78
GC content: 36.67
Gene sequence:
>210_bases ATGGCGAAAACAAAACAGGAATGGCTGTATCAGTTACGGCGATGTTCATCAGTCAATACGCTGGAAAAAATTATTCATAA AAACAGAGACAGTTTATTAAACAGTGAACGTGAATCATTTAATTCAGCAGCAGACCACCGGTTAGCGGAATTAATCACCG GAAAGTTATATGACAGGATACCAAAAGAGATATGGAAATATGTAAGGTAA
Upstream 100 bases:
>100_bases GCTCTGGTCAGATGCTGATCCGGTTCCCCCCTGGATATGGAGACACCGTAAATAAAGCGATGGCAATCTTATCATTCATC TGTTCTCAGCGGGAATAAAA
Downstream 100 bases:
>100_bases TAATTCAGCATAATTAATTACCAGGAGCAGATAAACAATGAAGCTGATTATTTTTATTCTTATTGTTCTGATTATTGCAG CGTTACTTATCCGGATTATC
Product: putative regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLLNSERESFNSAADHRLAELITGKLYDRIPKEIWKYVR
Sequences:
>Translated_69_residues MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLLNSERESFNSAADHRLAELITGKLYDRIPKEIWKYVR >Mature_68_residues AKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLLNSERESFNSAADHRLAELITGKLYDRIPKEIWKYVR
Specific function: Down-regulates hemolysin production and can also stimulate transposition events in vivo. May bind DNA and influence DNA topology in response to environmental stimuli [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hha/ymoA/cnu family [H]
Homologues:
Organism=Escherichia coli, GI1786665, Length=66, Percent_Identity=53.030303030303, Blast_Score=81, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007985 [H]
Pfam domain/function: PF05321 HHA [H]
EC number: NA
Molecular weight: Translated: 8293; Mature: 8161
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLLNSERESFNSAADHRLAELITGKLYDRI CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKEIWKYVR HHHHHHHCC >Mature Secondary Structure AKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLLNSERESFNSAADHRLAELITGKLYDRI CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PKEIWKYVR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]