Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is traX [H]
Identifier: 91206385
GI number: 91206385
Start: 110506
End: 111309
Strand: Direct
Name: traX [H]
Synonym: UTI89_P140
Alternate gene names: 91206385
Gene position: 110506-111309 (Clockwise)
Preceding gene: 91206383
Following gene: 91206386
Centisome position: 96.74
GC content: 57.21
Gene sequence:
>804_bases GTGACCTGCAGAAAGAGAAAACCCTGGGCGGAGACTGATACAGGAAGACAAACACTGATGACAACGGATAACACGAACAC GACACGTAACGATTCACTGGCTGCACGGACCGATACCTGGTTGCAGTCGTTTCTGGTCTGGTCACCCGGACAGCGGGATA TCATCAAAACGGTGGCGCTGGTGCTGATGGTACTGGACCACATCAATCTGATATTCCAGCTGAAGCAGGAATGGATGTTT CTGGCCGGGCGAGGAGCCTTTCCGCTGTTTGCCCTGGTGTGGGGGCTGAATCTGTCCCGTCATGCGCATATCCGGCAACC GGCCATTAACCGGCTGTGGGGATGGGGAATTATTGCCCAGTTCGCATATTATCTGGCCGGCTTTCCCTGGTATGAGGGGA ATATCCTGTTTGCCTTTGCAGTGGCGGCACAGGTGCTGACGTGGTGTGAAACGCGCAGTGGGTGGCGTACAGCAGCGGCC ATTCTTCTGATGGCCCTGTGGGGGCCTTTGTCCGGCACCAGTTACGGCATTGCCGGGCTGCTGATGCTGGCGGTCAGTTA CCGACTGTACCGGGCGGAAGACAGAGCGGAACGTCTGGCGCTGCTTGCATGCCTGCTGGCCGTTATTCCGGCACTTAACC TTGCCTCCAGTGATGCAGCGGCGGTGGCCGGTCTTGTAATGACGGTGCTGACCGTTGGTCTGGTGTCGTGTGCAGGAAAA TCATTACCCCGTTTCTGGCCCGGGGATTTTTTCCCGGTATTCTACGCCTGTCATCTGGCTGTGCTGGGCGTTCTGGCGTT GTGA
Upstream 100 bases:
>100_bases GTGCTGCGTGAATCACAACGGGAGCGGGAAGCGGTCCGGGAGGTTGCCCGGGAAAATCTGCTGCAGGAGCGTCTGCAGCA GATGGAGCGGGATATGGTTC
Downstream 100 bases:
>100_bases CTGGTATGATACTGACGCTGATTCTGATTATTAATAAACAACATAACACAGGATATTTATGAAAATTACGGATCACAAAC TCTCTGAAGGTATTGCCCTG
Product: conjugal transfer pilus acetylation protein TraX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTCRKRKPWAETDTGRQTLMTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLMVLDHINLIFQLKQEWMF LAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQFAYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAA ILLMALWGPLSGTSYGIAGLLMLAVSYRLYRAEDRAERLALLACLLAVIPALNLASSDAAAVAGLVMTVLTVGLVSCAGK SLPRFWPGDFFPVFYACHLAVLGVLAL
Sequences:
>Translated_267_residues MTCRKRKPWAETDTGRQTLMTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLMVLDHINLIFQLKQEWMF LAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQFAYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAA ILLMALWGPLSGTSYGIAGLLMLAVSYRLYRAEDRAERLALLACLLAVIPALNLASSDAAAVAGLVMTVLTVGLVSCAGK SLPRFWPGDFFPVFYACHLAVLGVLAL >Mature_266_residues TCRKRKPWAETDTGRQTLMTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLMVLDHINLIFQLKQEWMFL AGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQFAYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAI LLMALWGPLSGTSYGIAGLLMLAVSYRLYRAEDRAERLALLACLLAVIPALNLASSDAAAVAGLVMTVLTVGLVSCAGKS LPRFWPGDFFPVFYACHLAVLGVLAL
Specific function: Responsible for the N-terminal acetylation of F pilin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the traX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008875 - InterPro: IPR014125 [H]
Pfam domain/function: PF05857 TraX [H]
EC number: NA
Molecular weight: Translated: 29568; Mature: 29437
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCRKRKPWAETDTGRQTLMTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVAL CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH VLMVLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQ HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHH FAYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAGL HHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LMLAVSYRLYRAEDRAERLALLACLLAVIPALNLASSDAAAVAGLVMTVLTVGLVSCAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC SLPRFWPGDFFPVFYACHLAVLGVLAL CCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TCRKRKPWAETDTGRQTLMTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVAL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH VLMVLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQ HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHH FAYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAGL HHHHHHCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LMLAVSYRLYRAEDRAERLALLACLLAVIPALNLASSDAAAVAGLVMTVLTVGLVSCAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC SLPRFWPGDFFPVFYACHLAVLGVLAL CCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1916281; 7915817; 2164585; 8444800 [H]