Definition Escherichia coli UTI89 plasmid pUTI89, complete sequence.
Accession NC_007941
Length 114,230

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The map label for this gene is traS

Identifier: 91206379

GI number: 91206379

Start: 100873

End: 101358

Strand: Direct

Name: traS

Synonym: UTI89_P134

Alternate gene names: NA

Gene position: 100873-101358 (Clockwise)

Preceding gene: 91206378

Following gene: 91206380

Centisome position: 88.31

GC content: 37.04

Gene sequence:

>486_bases
ATGATAATGAGATGTTTAACCCATATTACTCTGGTAACGGTGATACAGTTTATCGCCTGTTATCTGGCTGGTTGGGGGAA
TGCCGAAACAATTTTTATGCTGTTCTTCATAGTACTATGGCAGGGACTGTTTATATGGTTGTTCTCTCAAATACGAAAAA
AACGGAATGTGTCGGATGAGTTTAAGTTTAGTAAAGGCGTTTGGTATATAACGATACCAGTATCTTCCTTACTCTCTCCA
TTATTAAGCCTGATGGTTTTTATCATTGGTACACTATACGAATTAAGGCGAGTTAGTGGTTGTGTAAGCGTAAGAGAATG
GATGCAATCTCAGGTAAATGAACAAACTAATGAAGATTTGCATCTGGATTTTGATAATATGGATTTTCATCGTACTAATC
CTGCAACAGGGTTACCTATGTCAGGTATTGGTGTGGATATCGGTGGTAATTCATATGGTTATAGTTCAAAACGATATGAT
GAGTGA

Upstream 100 bases:

>100_bases
GGCTCAGGAAAGAATGCCCGGGGCTGACAGTCCACAGGAACTTATGAAAAGGGCAAAGGAATATCAGGATAAGTATAAGC
AATAATGCTGTTTTTGGGAG

Downstream 100 bases:

>100_bases
ATCTTAATTTGTATATTATGACGTTTTATTCAATATGAAGGAACATTGATGAAAATGAAAAAATTGATGATGGTTGCACT
GGTCAGTTCCACTCTGGCCC

Product: surface exclusion inner membrane protein

Products: NA

Alternate protein names: Entry Exclusion Protein; Conjugal Transfer Protein TraS; Surface Exclusion Inner Membrane Protein

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDEFKFSKGVWYITIPVSSLLSP
LLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDLHLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYD
E

Sequences:

>Translated_161_residues
MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDEFKFSKGVWYITIPVSSLLSP
LLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDLHLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYD
E
>Mature_161_residues
MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDEFKFSKGVWYITIPVSSLLSP
LLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDLHLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYD
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18538; Mature: 18538

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDE
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
FKFSKGVWYITIPVSSLLSPLLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDL
HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
HLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYDE
EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDE
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
FKFSKGVWYITIPVSSLLSPLLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDL
HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
HLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYDE
EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA