Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
---|---|
Accession | NC_007941 |
Length | 114,230 |
Click here to switch to the map view.
The map label for this gene is traS
Identifier: 91206379
GI number: 91206379
Start: 100873
End: 101358
Strand: Direct
Name: traS
Synonym: UTI89_P134
Alternate gene names: NA
Gene position: 100873-101358 (Clockwise)
Preceding gene: 91206378
Following gene: 91206380
Centisome position: 88.31
GC content: 37.04
Gene sequence:
>486_bases ATGATAATGAGATGTTTAACCCATATTACTCTGGTAACGGTGATACAGTTTATCGCCTGTTATCTGGCTGGTTGGGGGAA TGCCGAAACAATTTTTATGCTGTTCTTCATAGTACTATGGCAGGGACTGTTTATATGGTTGTTCTCTCAAATACGAAAAA AACGGAATGTGTCGGATGAGTTTAAGTTTAGTAAAGGCGTTTGGTATATAACGATACCAGTATCTTCCTTACTCTCTCCA TTATTAAGCCTGATGGTTTTTATCATTGGTACACTATACGAATTAAGGCGAGTTAGTGGTTGTGTAAGCGTAAGAGAATG GATGCAATCTCAGGTAAATGAACAAACTAATGAAGATTTGCATCTGGATTTTGATAATATGGATTTTCATCGTACTAATC CTGCAACAGGGTTACCTATGTCAGGTATTGGTGTGGATATCGGTGGTAATTCATATGGTTATAGTTCAAAACGATATGAT GAGTGA
Upstream 100 bases:
>100_bases GGCTCAGGAAAGAATGCCCGGGGCTGACAGTCCACAGGAACTTATGAAAAGGGCAAAGGAATATCAGGATAAGTATAAGC AATAATGCTGTTTTTGGGAG
Downstream 100 bases:
>100_bases ATCTTAATTTGTATATTATGACGTTTTATTCAATATGAAGGAACATTGATGAAAATGAAAAAATTGATGATGGTTGCACT GGTCAGTTCCACTCTGGCCC
Product: surface exclusion inner membrane protein
Products: NA
Alternate protein names: Entry Exclusion Protein; Conjugal Transfer Protein TraS; Surface Exclusion Inner Membrane Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDEFKFSKGVWYITIPVSSLLSP LLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDLHLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYD E
Sequences:
>Translated_161_residues MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDEFKFSKGVWYITIPVSSLLSP LLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDLHLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYD E >Mature_161_residues MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDEFKFSKGVWYITIPVSSLLSP LLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDLHLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYD E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18538; Mature: 18538
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDE CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH FKFSKGVWYITIPVSSLLSPLLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDL HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE HLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYDE EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MIMRCLTHITLVTVIQFIACYLAGWGNAETIFMLFFIVLWQGLFIWLFSQIRKKRNVSDE CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH FKFSKGVWYITIPVSSLLSPLLSLMVFIIGTLYELRRVSGCVSVREWMQSQVNEQTNEDL HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE HLDFDNMDFHRTNPATGLPMSGIGVDIGGNSYGYSSKRYDE EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA