Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is trbJ [H]
Identifier: 91206375
GI number: 91206375
Start: 95958
End: 96305
Strand: Direct
Name: trbJ [H]
Synonym: UTI89_P130
Alternate gene names: 91206375
Gene position: 95958-96305 (Clockwise)
Preceding gene: 91206374
Following gene: 91206376
Centisome position: 84.0
GC content: 45.11
Gene sequence:
>348_bases ATGCCGCCAGTTTTATGGCGCGGATGGATACCGTTCTGCAGATGTACGGAGAGGAAAAAGGTGCGAAATAAGCAGGTGGT GTTACTCATTGCCGGAATATCCGGCATCGCGACGGGAATAATCGTCAGCCTGAATATCCCCTTTATCCGTCAGGGGCTTT TTTATCCCGCCAGCCCTGTGGAAATTGTCGTTTCGCTGTGTCTTACCTTTTCTGTTTCTGTTGTGTTTTTTGTGGGGGCA ATTGTGGGATGGATTTCGGTGTCTGAAATATATTACAGCCGCATGAACGGTCTGAATGAATCATCGGAAATATCAGAGGA AACTTATAATGAAAGAAAAAAGAAATGA
Upstream 100 bases:
>100_bases ATGCAGACCTTCTTCCCGAATATTCCGGTGGCCACACCGACCACCTTCCTGGTCAACGTCAACACACTTGAGGCATTACC GCTTTTGCAGGGGGCAACGG
Downstream 100 bases:
>100_bases TGCGGAACTAAAAAACAGAAAAACTAAACGGGATTATGATTATGAACGCAGGGTTTCTGATATATATTTTGATCTGTTTT TTGTGTTCGTTGCTGCCGGA
Product: conjugal transfer protein TrbJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPPVLWRGWIPFCRCTERKKVRNKQVVLLIAGISGIATGIIVSLNIPFIRQGLFYPASPVEIVVSLCLTFSVSVVFFVGA IVGWISVSEIYYSRMNGLNESSEISEETYNERKKK
Sequences:
>Translated_115_residues MPPVLWRGWIPFCRCTERKKVRNKQVVLLIAGISGIATGIIVSLNIPFIRQGLFYPASPVEIVVSLCLTFSVSVVFFVGA IVGWISVSEIYYSRMNGLNESSEISEETYNERKKK >Mature_114_residues PPVLWRGWIPFCRCTERKKVRNKQVVLLIAGISGIATGIIVSLNIPFIRQGLFYPASPVEIVVSLCLTFSVSVVFFVGAI VGWISVSEIYYSRMNGLNESSEISEETYNERKKK
Specific function: Unknown. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12943; Mature: 12812
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVLWRGWIPFCRCTERKKVRNKQVVLLIAGISGIATGIIVSLNIPFIRQGLFYPASPV CCCCCCCCCCHHHHHCCHHHCCCCEEEEEEECCHHHHHHHHEECCCHHHHHCCCCCCCHH EIVVSLCLTFSVSVVFFVGAIVGWISVSEIYYSRMNGLNESSEISEETYNERKKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PPVLWRGWIPFCRCTERKKVRNKQVVLLIAGISGIATGIIVSLNIPFIRQGLFYPASPV CCCCCCCCCHHHHHCCHHHCCCCEEEEEEECCHHHHHHHHEECCCHHHHHCCCCCCCHH EIVVSLCLTFSVSVVFFVGAIVGWISVSEIYYSRMNGLNESSEISEETYNERKKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2536655; 7915817 [H]