Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is traP [H]
Identifier: 91206356
GI number: 91206356
Start: 82839
End: 83429
Strand: Direct
Name: traP [H]
Synonym: UTI89_P111
Alternate gene names: 91206356
Gene position: 82839-83429 (Clockwise)
Preceding gene: 91206355
Following gene: 91206357
Centisome position: 72.52
GC content: 50.08
Gene sequence:
>591_bases ATGGCAAATAATATGTCGTCCCGTCAGGCGTGCCATGCCGCCCGGTATGTTGTCGCCCGGGTTCTGCGAGGACTGTTCTG GTGTCTGAAGTACACCGTCATTCTGCCACTGGCCACAATGGCCCTGATGGCTCTGTTTGTTTTATGGAAGGACAACACCA CGCCGGGGAAATTACTGGTTAAGGAGATTAACTTCGTAAGACAAACAGCACCTGCCGGACAGTTCCCGGTCAGTGAATGC TGGTTTTCTTCCTCTGATTCTTCAGGCAGATCAGAAATACAGGATATCTGCCATTACCGCGCGGCTGATGCTGCAGATTA TGTCAGGGAGACTGACCGGTCACTGATGCAACTGGTCACCGCATTATGGGCAACACTGGCACTGATGTATGTCTCGCTGG CAGCGATCACCGGGAAATATCCGGTGCGACCCGGAAAAATGAAATGTATCCGGGTGGTAACCGCAGATGAACATCTGAAG GAAGTTTATACGGAAGACGCTTCCCTGCCGGGAAAAATCAGGAAATGCCCTGTTTATCTTCCTGATGACAGAACAAACAG AAACAACGGAGATAAAAATGAACATGCGTAA
Upstream 100 bases:
>100_bases GAAAGTCATCTTAACGGCTTTAATACTGACCAGATGCTGAAGCAGCTGGGCAACCTGAATCCGCAGCAGTTTATGTCCGG CAGCCAGGGAGGAGGCAACG
Downstream 100 bases:
>100_bases TATTAATGCTATTACAGCCCTTTCTGTACCGGGTAAAACTATGTCAGATGATTTTATGCATGCTGTTCTCAGTAACTGCA CCACAAGAATCGTCCTTCCT
Product: conjugal transfer protein TraP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLVKEINFVRQTAPAGQFPVSEC WFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLK EVYTEDASLPGKIRKCPVYLPDDRTNRNNGDKNEHA
Sequences:
>Translated_196_residues MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLVKEINFVRQTAPAGQFPVSEC WFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLK EVYTEDASLPGKIRKCPVYLPDDRTNRNNGDKNEHA >Mature_195_residues ANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLVKEINFVRQTAPAGQFPVSECW FSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLKE VYTEDASLPGKIRKCPVYLPDDRTNRNNGDKNEHA
Specific function: Unknown. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009913 [H]
Pfam domain/function: PF07296 TraP [H]
EC number: NA
Molecular weight: Translated: 22020; Mature: 21888
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KEINFVRQTAPAGQFPVSECWFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVT HHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH ALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLKEVYTEDASLPGKIRKCPVYL HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEC PDDRTNRNNGDKNEHA CCCCCCCCCCCCCCCC >Mature Secondary Structure ANNMSSRQACHAARYVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KEINFVRQTAPAGQFPVSECWFSSSDSSGRSEIQDICHYRAADAADYVRETDRSLMQLVT HHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH ALWATLALMYVSLAAITGKYPVRPGKMKCIRVVTADEHLKEVYTEDASLPGKIRKCPVYL HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEC PDDRTNRNNGDKNEHA CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7915817 [H]