Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is psiB [H]
Identifier: 91206340
GI number: 91206340
Start: 72860
End: 73294
Strand: Direct
Name: psiB [H]
Synonym: UTI89_P095
Alternate gene names: 91206340
Gene position: 72860-73294 (Clockwise)
Preceding gene: 229577731
Following gene: 91206341
Centisome position: 63.78
GC content: 56.32
Gene sequence:
>435_bases ATGAAAACTGAACTGACTCTGAATGTATTACATACCATGAACGCACAGGAATATGAAGATATCCGGGCTGCCGGAAGTGA TGAACGTCGTGAGCTGACACACGCCGTGATGCGGGAACTGGATGCGCCGGACAACTGGACGATGAACGGCGAGTACGGCA GCGAGTTTGGCGGCTTTTTCCCCGTCCAGGTCCGTTTCACGCCTGCCCACGAACGTTTTCACCTGGCGTTATGTTCACCG GGCGATGTCTCCCAGGTCTGGGTGCTGGTTCTGGTGAATGCCGGTGGTGAGCCGTTTGCGGTGGTTCAGGTACAGCGGCG GTTTGCACCGGAAGCCGTCAGCCATTCACTGGCACTGGCGGCGTCACTGGATACGCAGGGATACAGCGTTAACGACATCA TCCATATCCTGATGGCGGAAGGAGGTCAGGTATGA
Upstream 100 bases:
>100_bases GACGGATGCCACTGAACGCACCGATAACCTGGCTGATGCCGCCTGATGAACAACCACATCGCCCCGCCGGAGACGGGGCG GCAGCAAGGGAGATACCGTG
Downstream 100 bases:
>100_bases GCGCACGTTCACAGGCACTGGTTCCCCTCAGCACAGAGCAACAGGCCGCATGGCGGGCAGTGGCAGAGACGGAAAAACGC CGCCATCAGGGAAACACGCT
Product: plasmid SOS inhibition protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKTELTLNVLHTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSP GDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALAASLDTQGYSVNDIIHILMAEGGQV
Sequences:
>Translated_144_residues MKTELTLNVLHTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSP GDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALAASLDTQGYSVNDIIHILMAEGGQV >Mature_144_residues MKTELTLNVLHTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSP GDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALAASLDTQGYSVNDIIHILMAEGGQV
Specific function: In contrast to psiB protein of plasmid R6-5, this protein is unable to prevent SOS induction for potentially two reasons:less activity and/or insufficient expression [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To psiB protein of plasmid R6-5 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009385 [H]
Pfam domain/function: PF06290 PsiB [H]
EC number: NA
Molecular weight: Translated: 15898; Mature: 15898
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTELTLNVLHTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF CCCEEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEE PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALA EEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEHHHCCHHHHHHHEEEE ASLDTQGYSVNDIIHILMAEGGQV EECCCCCCCHHHHHHEEECCCCCC >Mature Secondary Structure MKTELTLNVLHTMNAQEYEDIRAAGSDERRELTHAVMRELDAPDNWTMNGEYGSEFGGFF CCCEEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEE PVQVRFTPAHERFHLALCSPGDVSQVWVLVLVNAGGEPFAVVQVQRRFAPEAVSHSLALA EEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEHHHCCHHHHHHHEEEE ASLDTQGYSVNDIIHILMAEGGQV EECCCCCCCHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3205720; 10366527 [H]