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The map label for this gene is ydeA

Identifier: 91206338

GI number: 91206338

Start: 70549

End: 70788

Strand: Direct

Name: ydeA

Synonym: UTI89_P093

Alternate gene names: 91206338

Gene position: 70549-70788 (Clockwise)

Preceding gene: 91206337

Following gene: 229577731

Centisome position: 61.76

GC content: 52.08

Gene sequence:

>240_bases
ATGAGGATGAGCGAATATTTCAGAATACTTCAGGGGCTGCCTGACGGCTCCTTTACCCGCGAACAGGCTGAAGCCGTTGC
CGCACAGTACCGGAATGTCTTTATCGAGGATGATCAGGGAACGCATTTTCGCCTGGTTGTCCGCAATAACAGTGGCCTGG
TCTGGCGCACCTGGAATTTTGAGGACGGTGCCGGGTACTGGATGAACCATGTCATCCGGAATTTCGGCATTCTTAAGTAA

Upstream 100 bases:

>100_bases
AACCGCCGGAGGGTGAGGATTACTGGTTTTCAGACGATATCCCGTTCTGAATGACTGACTGTGAAAACCGCCCCGTCCAG
TGCGGGGCATCACCGGAGAG

Downstream 100 bases:

>100_bases
GAGAGGTGCCGGACGCGCAAACGTCCGGCAGGACATAAGCAATTATAAGGGGATGATTATGCCTGTAACGAAGTGTGAAC
CAGAAACCACCCGCAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGLVWRTWNFEDGAGYWMNHVIRNFGILK

Sequences:

>Translated_79_residues
MRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGLVWRTWNFEDGAGYWMNHVIRNFGILK
>Mature_79_residues
MRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGLVWRTWNFEDGAGYWMNHVIRNFGILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0401 family

Homologues:

Organism=Escherichia coli, GI1786443, Length=66, Percent_Identity=59.0909090909091, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUBL_ECOUT (Q1R1U5)

Other databases:

- EMBL:   CP000244
- RefSeq:   YP_538692.1
- ProteinModelPortal:   Q1R1U5
- SMR:   Q1R1U5
- STRING:   Q1R1U5
- EnsemblBacteria:   EBESCT00000071082
- GeneID:   3996460
- GenomeReviews:   CP000244_GR
- KEGG:   eci:UTI89_P093
- eggNOG:   NOG145762
- GeneTree:   EBGT00050000009813
- HOGENOM:   HBG471076
- OMA:   IRDFGIL
- BioCyc:   ECOL364106:UTI89_P093-MONOMER
- InterPro:   IPR009253
- ProDom:   PD028015

Pfam domain/function: PF06006 DUF905

EC number: NA

Molecular weight: Translated: 9328; Mature: 9328

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGLVWRTWNF
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEEECCCCEEEEECCC
EDGAGYWMNHVIRNFGILK
CCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MRMSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDQGTHFRLVVRNNSGLVWRTWNF
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEEECCCCEEEEECCC
EDGAGYWMNHVIRNFGILK
CCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA