Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
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Accession | NC_007941 |
Length | 114,230 |
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The map label for this gene is yccB [H]
Identifier: 91206314
GI number: 91206314
Start: 58798
End: 59652
Strand: Direct
Name: yccB [H]
Synonym: UTI89_P069
Alternate gene names: 91206314
Gene position: 58798-59652 (Clockwise)
Preceding gene: 91206313
Following gene: 91206317
Centisome position: 51.47
GC content: 52.63
Gene sequence:
>855_bases ATGCCAAACTGGTGCTCGAATCGTATGTATTTTTCTGGTGAACCGGCAAAGATTGCTGAGATTAAACGGCTGGCCAGCGG TGCAGTCACACCGTTTTATCGCCGCGCCACAAATGAAGGTATTCAGCTGTTTCTGGCCGGAAGTGCCGGACTTCTGCAGA CCACTGAAGATGTGCGGTTTGAACCATGCCCCGGACTGACGGCTGCCGGACGTGGTGTTTTATCGCCGGAGAATATCACG TTCACCCGCTGGCTGAAGCACCTGCAGGACGGTGTACTGCTGGATGAGCAAAACTGCCTGATGCTGCATGAACTCTGGCT GCAGAGCGGTACTGGACAGCGTCGCTGGGAAGGGTTACCGGATGATGTCAGGGAAACTATCACTGTGCATTTCACCGCAA AAAGAGGTGACTGGTGTGACATCTGGGGTAACGAGGATGTATCGGTGTGGTGGAACCGTCTGTGTGACAACGTACTGTCG GAAAAAACCATGCCGTTTGACCTGCTGACGGTTTTGCCGACCCGCCTGGATATTGAAGTGAATGGCTTTAACGGCGGTGT TCTGAACGGTGTTCCTTCTGCATATCACTGGTATACAGAACGGTATGGCGTGAAGTGGCCTTGTGGGTATGACCTGAATA TCAGCAGTCAGGGGGAAAACTTCATTCAGGTAGATTTCGACACGCCGTGGTGTCAGCCGGAAAGCGACGTTGTTGCAGAA TTAAGCCGCCGTTTCGGCTGCACGCTGGAGCACTGGTACGCCGAACAGGGCTGCAATTTCTGTGGCTGTGTCAACGCCAC GATGTTTGACCGTTATTTGCCATTTTCATGCCCGCTAAGATACTTTCGTTACTGA
Upstream 100 bases:
>100_bases ACGCGCTGCGGCTTCGGGGCCGCACCTGCATTCGTATGCGGTCGCCCGGTTACAGGTGCGGCACGGCCTGATGGAGGCCG TATGTGAGAGGAGAATTCCC
Downstream 100 bases:
>100_bases TGCTGTCCGCTTTTCACCATTTCATCATCACTGATTGGCGTTGTGTTTTTGGTCAGCACTCCAGCTTTACGTTTCTCTTT TAACCGGTAACTCTCTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPNWCSNRMYFSGEPAKIAEIKRLASGAVTPFYRRATNEGIQLFLAGSAGLLQTTEDVRFEPCPGLTAAGRGVLSPENIT FTRWLKHLQDGVLLDEQNCLMLHELWLQSGTGQRRWEGLPDDVRETITVHFTAKRGDWCDIWGNEDVSVWWNRLCDNVLS EKTMPFDLLTVLPTRLDIEVNGFNGGVLNGVPSAYHWYTERYGVKWPCGYDLNISSQGENFIQVDFDTPWCQPESDVVAE LSRRFGCTLEHWYAEQGCNFCGCVNATMFDRYLPFSCPLRYFRY
Sequences:
>Translated_284_residues MPNWCSNRMYFSGEPAKIAEIKRLASGAVTPFYRRATNEGIQLFLAGSAGLLQTTEDVRFEPCPGLTAAGRGVLSPENIT FTRWLKHLQDGVLLDEQNCLMLHELWLQSGTGQRRWEGLPDDVRETITVHFTAKRGDWCDIWGNEDVSVWWNRLCDNVLS EKTMPFDLLTVLPTRLDIEVNGFNGGVLNGVPSAYHWYTERYGVKWPCGYDLNISSQGENFIQVDFDTPWCQPESDVVAE LSRRFGCTLEHWYAEQGCNFCGCVNATMFDRYLPFSCPLRYFRY >Mature_283_residues PNWCSNRMYFSGEPAKIAEIKRLASGAVTPFYRRATNEGIQLFLAGSAGLLQTTEDVRFEPCPGLTAAGRGVLSPENITF TRWLKHLQDGVLLDEQNCLMLHELWLQSGTGQRRWEGLPDDVRETITVHFTAKRGDWCDIWGNEDVSVWWNRLCDNVLSE KTMPFDLLTVLPTRLDIEVNGFNGGVLNGVPSAYHWYTERYGVKWPCGYDLNISSQGENFIQVDFDTPWCQPESDVVAEL SRRFGCTLEHWYAEQGCNFCGCVNATMFDRYLPFSCPLRYFRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023136 - InterPro: IPR009694 [H]
Pfam domain/function: PF06924 DUF1281 [H]
EC number: NA
Molecular weight: Translated: 32527; Mature: 32396
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNWCSNRMYFSGEPAKIAEIKRLASGAVTPFYRRATNEGIQLFLAGSAGLLQTTEDVRF CCCCCCCCCEECCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCEECCCCCCC EPCPGLTAAGRGVLSPENITFTRWLKHLQDGVLLDEQNCLMLHELWLQSGTGQRRWEGLP CCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCCCCCCC DDVRETITVHFTAKRGDWCDIWGNEDVSVWWNRLCDNVLSEKTMPFDLLTVLPTRLDIEV HHHHCEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEE NGFNGGVLNGVPSAYHWYTERYGVKWPCGYDLNISSQGENFIQVDFDTPWCQPESDVVAE CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHH LSRRFGCTLEHWYAEQGCNFCGCVNATMFDRYLPFSCPLRYFRY HHHHHCCCHHHHHHHHCCCEEEECCHHHHHHCCCCCCCHHHHCC >Mature Secondary Structure PNWCSNRMYFSGEPAKIAEIKRLASGAVTPFYRRATNEGIQLFLAGSAGLLQTTEDVRF CCCCCCCCEECCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCEECCCCCCC EPCPGLTAAGRGVLSPENITFTRWLKHLQDGVLLDEQNCLMLHELWLQSGTGQRRWEGLP CCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCCCCCCC DDVRETITVHFTAKRGDWCDIWGNEDVSVWWNRLCDNVLSEKTMPFDLLTVLPTRLDIEV HHHHCEEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEE NGFNGGVLNGVPSAYHWYTERYGVKWPCGYDLNISSQGENFIQVDFDTPWCQPESDVVAE CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHH LSRRFGCTLEHWYAEQGCNFCGCVNATMFDRYLPFSCPLRYFRY HHHHHCCCHHHHHHHHCCCEEEECCHHHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10366527 [H]