Definition | Escherichia coli UTI89 plasmid pUTI89, complete sequence. |
---|---|
Accession | NC_007941 |
Length | 114,230 |
Click here to switch to the map view.
The map label for this gene is insC1 [C]
Identifier: 91206283
GI number: 91206283
Start: 33130
End: 33534
Strand: Direct
Name: insC1 [C]
Synonym: UTI89_P038
Alternate gene names: 91206283
Gene position: 33130-33534 (Clockwise)
Preceding gene: 91206282
Following gene: 91206284
Centisome position: 29.0
GC content: 49.38
Gene sequence:
>405_bases ATGAAATCATTAACCGCAGTGCGTAAAAAAAGCCCTAATTATCCCGTTGAGTTCAAAATCAAAATGGTTGAACTCTCGCA TCGACCAGAGATCTCCGTAGCGCAACTCGCTCGTGAGCATGGGATCAACGATAATTTGCTGTTCAAGTGGCGCCAGTACT GGCGCGAAGGAAAACTACGTCCTCCTTCAACAACAGAAAACAACGTGCCTGAGCTGCTCCCGATAACTCTTGATGCCGAA GATGTTGTCCCTACAACCTCCCCCCGGTCACAACCTGTAGCTGCTGCGACACCTGAATCACTCAATATCAGCTGTGAAGT GACGTTCCGGCACGGATCACTCCGTCTGAATGGTGCCATCAGCGAAAATATCCTGAACCTGCTGATACGGGAGCTCAAAC GTTGA
Upstream 100 bases:
>100_bases CGTAAGAGCTGGAAAAACCGTAAGCGTCGTCTCAGCACCGTCTGGCAGATCCTGAAATTCCTGAGAGAATAGTGGACACC AAATATGGTGGACGCTATCC
Downstream 100 bases:
>100_bases TCCCATTACCATCAGGGACAAAGATCTGGCTGGTCGCTGGCATCACCGATATGAGAAACGGCTTCAACGGCCTGGCGGCA AAGGTGCAGACGACGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: IS Orf; IS66 Family Transposase OrfA; IS66 Transposase; IS Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAE DVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR
Sequences:
>Translated_134_residues MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAE DVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR >Mature_134_residues MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAE DVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR
Specific function: Involved in the transposition of the insertion sequence is2 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15225; Mature: 15225
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLR CCCCCCHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC PPSTTENNVPELLPITLDAEDVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAI CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCH SENILNLLIRELKR HHHHHHHHHHHHCC >Mature Secondary Structure MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLR CCCCCCHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC PPSTTENNVPELLPITLDAEDVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAI CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCH SENILNLLIRELKR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA