Definition | Rhodopseudomonas palustris BisB18 chromosome, complete genome. |
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Accession | NC_007925 |
Length | 5,513,844 |
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Identifier: 90425026
GI number:
Start: 3930710
End: 3933151
Strand: Reverse
Name: Not Available
Synonym: RPC_3538
Alternate gene names: NA
Gene position: NA
Preceding gene: 90425027
Following gene: 90425025
Centisome position: NA
GC content: NA
Gene sequence:
>2442_bases ATGATGAATCTTGCTGAGTATCGTCGATCGATAACCCATCTGGGGGATTTTCTGCCCTGGGCCGCCTTGGTCGATGAGGG CATCGTTCTCAATAAGGACGGCTCGTTTCAGCGGACCGCGCAGTTTCGGGGACCGGATCTGGATTCTGCTGTGCCCGCGG AACTGGCCGCCGTCGCCAGCCGGCTGAACAACGCGTTGCGCAGGTTCGGCTCCGGCTGGGCAGTCTTTGTCGAGGCGCAG CGCTACCCCGCCAACAAATATCCCGTAAGTCATTTTCCGGATGTGGCGTCAGCCCTGGTTGACGTCGAGCGCCGCGCCGA ATTCGAGCGGGAAGGGGCGCATTACGAATCGGGTTATTTCCTGACCTTCCTCTATCTGCCGCCGCCCGAAGACACCGCCC GCACCGAGAAATTCCTCTACGAGGGGCGCGACCGCCGTCATGACGAGGATGCTCGGCAAGTACAACGCGGCTTCGTTGAT CGCACCGACCGGGTGCTCGGGCTTGTCGAGGGCTTTATGCCCGAACTTAAATGGCTCGATGACGAGGAGACGCTGACCTA CCTGCATTCGACCGTCTCGACCAAGCGCCAGCGCGTCCGCGTCCCCGAGATCCCGATGTATCTCGACGCTCTGCTGGCCG ACCAGCCGTTGACCGGCGGCCTCGAGCCGATGCTGGGACAGTCCCATCTGCGGGTGCTGACGGTCGTCGGGTTTCCGACG GTGACTACCCCCGGCATTCTGGACGAGCTCAACCGGCTCGCATTCGCCTACCGCTGGGCGACCCGCGCCATCATGCTCGA CAAAACCGACGCGACCAGGCTGCTGACCAAGATCCGCCGGCAATGGTTCGCCAAGCGCAAATCGATCGCCGCGATCCTGA AGGAGGTGATGACCAACGAAGCCTCGACGCTCCTAGATAGCGATGCCCACAACAAGGCCTTGGATGCCGACGCCGCGTTG CAGGAACTCGGATCCGACGCGATCGGCCAGGCCTTCGTCACCGCAACCGTCACGGTGTGGGACGACGACCCTCGGGTCGC CGATGAGAAGCTCCGCCTGGTGGAGAAGGTGATCCAGGGACGCGATTTCACCTGCATGGTGGAGAGCGTCAACGCGGTCG AAGCTTGGCTCGGATCGCTACCCGGCCACGCATATGCCAACGTCCGACAGCCGCCGGTCTCGACGCTCAACCTCGCACAC ATGATCCCGCTGTCCGCGGTCTGGGCCGGCCCTGCGCGAGACGAGCATTTTGGCGCCCCGGCATTGTTCTTCGGCAGGAC CGAAGGCGCAACGCCGTTTCGGTTCTCACTTCACGTCGGCGACGTCGGCCATACCCTGGTGGTCGGTCCGACCGGCGCCG GCAAGTCGGTGTTGCTGGCACTGATGGCGCTGCAATTCCGGCGCTATCCGCACAATCAGATCTTTGCTTTCGACTTTGGC GGCTCGATCCGCGCTGCGGCGCTGGCGATGGGCGGAGACTGGCACGATCTCGGCGGCGATCTGACCGACGGCGCCTCGAG CTCTCTTTCGCTGCAGCCGCTGTCGCGCATCCCTGATGTCCCCGAGCGCGCCTGGGCCGCGGATTGGATCGTCAAGATCC TGTCCCGCGAGGGCATCACCACCACACCGGAGGTGAAAGAGCATCTCTGGTCGGCGCTGAGCTCGCTGGCGTCCGCGCCG GACACCGAGCGCACGATGACCGGCCTGTCTGTGCTGCTGCAGGCGCAGGCGCTGAAGCGGGCGCTGCAGCCCTATTGCAT TGGCGGGGCGTCAGGTCGGTTGCTTGATGCTGAGACCGAGCGGCTCGGAGACGCCCCGGTGCAGGTGTTCGAGACCGAGG GGCTGATCGGCACAGCCGCCGCGCCCGCGGTTCTCGCCTATCTGTTCCATCGCATCGAACACCGTCTCGATGGTCGGCCG ACGCTGTTGATCATCGACGAAGGCTGGCTGGCGCTGGATGACGAGGGCTTTGCCGGCCAGGTGCGGGAATGGCTGAAGAC GCTGCGTAAGAAGAACGCCTCCGTGGTCTTCGCCACCCAATCATTGTCCGACATCGACAATTCGGCGATTGCGCCGGCCA TCATCGAAAGCTGCCCGACGCGGCTGCTGTTGCCGAACGAGCGCGCGATCGAGCCGCAGATATCCGCCGTCTATCAGCGC TTCGGCCTCAACGACCGGCAGATCGAGATTCTGGCGCGCGCCACGCCGAAGCGCGATTATTACTGCCAGTCGCGCCGCGG CAACCGGCTGTTCGAGCTCGGCCTCGGCGCGATCGCTCTGGCTCTTTGCGCTGCGTCCTCCAAGGCCGACCAGGCCATGA TCGCGCGCGTGCTCGCCGAGCATGGGCGCGACGGCTTCGTGAGCGAATGGCTCCGCCGGCGCGACGCCGGCTGGGCCGTC GACCTCATTCCCGATCTCCGCAACCTGGAGTTTCCAACATGA
Upstream 100 bases:
>100_bases CGCCGCCGCGGTCTGGGCCGCCAAGCGCGATCCGCAGTTCGTCGATGTGGTGCGCCGCCATCTGCGCATCCCCGGTCATC TTTCCGTTTGAGGCGCGCAC
Downstream 100 bases:
>100_bases TTAGGCTCCGTCATCTGGCGGCGGCAAGCGCCGTCGCGCTGTCGCTCATCGTCGGCGCGCCACCACTCGCGGCGCAGTGG GTCGTGTTCGACCCCAACAA
Product: conjugal transfer ATPase TrbE
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>813_residues MMNLAEYRRSITHLGDFLPWAALVDEGIVLNKDGSFQRTAQFRGPDLDSAVPAELAAVASRLNNALRRFGSGWAVFVEAQ RYPANKYPVSHFPDVASALVDVERRAEFEREGAHYESGYFLTFLYLPPPEDTARTEKFLYEGRDRRHDEDARQVQRGFVD RTDRVLGLVEGFMPELKWLDDEETLTYLHSTVSTKRQRVRVPEIPMYLDALLADQPLTGGLEPMLGQSHLRVLTVVGFPT VTTPGILDELNRLAFAYRWATRAIMLDKTDATRLLTKIRRQWFAKRKSIAAILKEVMTNEASTLLDSDAHNKALDADAAL QELGSDAIGQAFVTATVTVWDDDPRVADEKLRLVEKVIQGRDFTCMVESVNAVEAWLGSLPGHAYANVRQPPVSTLNLAH MIPLSAVWAGPARDEHFGAPALFFGRTEGATPFRFSLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYPHNQIFAFDFG GSIRAAALAMGGDWHDLGGDLTDGASSSLSLQPLSRIPDVPERAWAADWIVKILSREGITTTPEVKEHLWSALSSLASAP DTERTMTGLSVLLQAQALKRALQPYCIGGASGRLLDAETERLGDAPVQVFETEGLIGTAAAPAVLAYLFHRIEHRLDGRP TLLIIDEGWLALDDEGFAGQVREWLKTLRKKNASVVFATQSLSDIDNSAIAPAIIESCPTRLLLPNERAIEPQISAVYQR FGLNDRQIEILARATPKRDYYCQSRRGNRLFELGLGAIALALCAASSKADQAMIARVLAEHGRDGFVSEWLRRRDAGWAV DLIPDLRNLEFPT
Sequences:
NA
Specific function: NA
COG id: COG3451
COG function: function code U; Type IV secretory pathway, VirB4 components
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA