Click here to switch to the map view.

The map label for this gene is ligB

Identifier: 90111628

GI number:

Start: 3817511

End: 3819193

Strand: Reverse

Name: ligB

Synonym: b3647

Alternate gene names: NA

Gene position: NA

Preceding gene: 16131524

Following gene: 157783152

Centisome position: NA

GC content: NA

Gene sequence:

>1683_bases
ATGAAAGTATGGATGGCGATATTAATAGGTATCTTGTGCTGGCAATCATCTGTGTGGGCGGTCTGTCCGGCCTGGTCGCC
AGCCAGAGCACAGGAAGAAATTTCCCGCCTGCAACAGCAAATAAAACAGTGGGACGATGACTACTGGAAGGAAGGAAAAA
GTGAGGTGGAAGACGGTGTTTACGATCAGTTAAGCGCCCGTCTTACGCAGTGGCAACGCTGCTTTGGGAGCGAGCCCCGC
GACGTGATGATGCCGCCTTTAAATGGTGCGGTTATGCATCCGGTTGCCCATACGGGTGTACGCAAAATGGTGGATAAAAA
CGCATTAAGTCTGTGGATGCGAGAACGTAGCGATCTTTGGGTGCAGCCAAAAGTTGATGGCGTTGCGGTAACCCTGGTTT
ATCGGGACGGGAAACTGAACAAAGCAATCAGTCGCGGTAATGGCCTGAAAGGCGAGGACTGGACGCAGAAAGTTAGCTTA
ATTTCCGCTGTGCCGCAAACCGTTAGCGGGCCTTTAGCCAACAGTACGCTTCAGGGGGAAATATTTCTCCAGCGCGAGGG
GCATATCCAACAACAAATGGGGGGAATAAATGCCCGCGCAAAAGTTGCTGGCTTGATGATGCGCCAGGACGATAGCGACA
CGCTGAATTCTCTGGGCGTTTTTGTCTGGGCATGGCCGGATGGACCGCAGTTAATGTCTGATCGTTTAAAAGAGCTGGCT
ACCGCAGGTTTTACTCTAACGCAGACGTATACCCGTGCGGTGAAAAATGCTGATGAAGTTGCGCGCGTACGCAATGAGTG
GTGGAAAGCGGAATTACCCTTCGTCACCGATGGCGTAGTTGTACGAGCGGCGAAAGAGCCAGAATCCCGCCATTGGCTAC
CGGGCCAGGCAGAGTGGCTGGTGGCCTGGAAATATCAACCTGTAGCTCAGGTTGCCGAAGTGAAGGCAATTCAGTTTGCG
GTGGGTAAGAGCGGTAAAATATCGGTGGTTGCGTCACTCGCACCTGTCATGCTGGATGATAAAAAAGTCCAGCGGGTGAA
TATTGGTTCCGTCAGGCGCTGGCAGGAGTGGGATATTGCGCCTGGTGATCAGATTCTCGTCAGCCTTGCCGGTCAGGGTA
TTCCTCGCATTGATGATGTGGTGTGGCGCGGTGCAGAACGTACAAAACCGACACCGCCAGAAAACCGCTTTAACTCGTTG
ACCTGCTACTTTGCTTCTGATGTTTGTCAGGAACAGTTCATTTCACGCTTAGTCTGGCTGGGGGCAAAACAGGTTCTTGG
GCTGGATGGCATTGGTGAGGCCGGTTGGCGCGCGCTGCATCAGACTCATCGCTTTGAACATATCTTTTCCTGGCTTTTAT
TAACGCCAGAGCAATTACAGAACACGCCGGGGATCGCGAAAAGTAAAAGTGCGCAGCTATGGCATCAGTTTAATCTGGCT
CGTAAGCAGCCTTTTACTCGCTGGGTGATGGCAATGGGAATACCGCTAACCCGGGCGGCGCTTAATGCCAGTGATGAACG
GTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGG
TTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCCAGCAGATCACAGGTTTTGAACCT
TAG

Upstream 100 bases:

>100_bases
GACGATTTTCAGGAAGCGTCCTCGCAGACTCCGTTTTTGCCACTCGGCTTTGCTTTCATCACGTTGTATATCTGCCTGAC
TATCTACAGCGGAGGTGATG

Downstream 100 bases:

>100_bases
TGTCCTTCGTGGCTGTAGTAAAAGACCGGTAATCCCAGCTTAAGGCGTAGCGCCAGTAAGCGGGCAAAAAAGCCGAATAC
CAGGGTGGAGATAATTACCA

Product: DNA ligase, NAD(+)-dependent

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>560_residues
MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR
DVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSL
ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELA
TAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFA
VGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSL
TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA
RKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP

Sequences:
NA

Specific function: NA

COG id: COG0272

COG function: function code L; NAD-dependent DNA ligase (contains BRCT domain type II)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA