Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022440

GI number:

Start: 3529208

End: 3531268

Strand: Direct

Name: Not Available

Synonym: Sde_2798

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022438

Following gene: 90022441

Centisome position: NA

GC content: NA

Gene sequence:

>2061_bases
ATGATTTCCCGACTGTCCCCTTTGGTAGCTTTTATCTGCCTAACTACTACATCTGTTGCTTTTGCCGAGGAAGGCACCAG
CTCTAAGCTGGAAGAAACCTTTATATATGGTGAGCAGGGAAAGACAGACACTGCAACAAAACTTGAGCTAAGTATTTTTG
AAACCCCGCAAACCGTTACCGCGGTTTCTAGAGCGCAGCTGGACGAATTTGCGTTAACCAGCATTTCTGATGTGCTTAAC
TATGCACCAGGCATTACCGTAGAAGAAGTTGAAACTAATCGAACCTACTACACTGCGCGCGGCTTCGATATTGTTAACTT
TCAATACGATGGTGTGGGCATTCCTTTTATTAGCGGCTTGAATTTAGGCCAACAAGATACGGCTATTTATGAAAAAGTTG
AGATTGTTAAAGGCTCTGCAGGCTTGATTACTGGCTTGGCGAACCCTTCTGCAACAATTAACTATGTACGCAAACGACCA
ACTGATGATTTGCAAGCATCTGCTGCACTTAGCCTTGGACAGTGGCAAAACAAGCGCGCCGAAGTGGATATAGCAACTGC
ACTTTCAGATTCAGTGCGAGCACGAGCAGTTGTGGCCTATGACAATGGTGAAACCCATTTAGATCGCAATAAAAACACAA
CTCAATTGGGCTACGGCATTTTTGAGTTCGACTTAAGCGATAACACCATGCTAACGGCGGGATACAGTTACGACCGCAAT
GAATCTAAAGGTGTTTTATGGGGTGCGTTGCCCTTACTTTATACCGATGGCTCGCGTACAAATTATGACGTATCTACCAG
TAATGCGCCCGACTGGACGTTTGCCAACACTACGCAAAAACAAAGTTTTGCAGAGCTGGAACATCACATAAATCAAAATT
GGACAGCGCATTTACACCTTACGCATAACCAATCAACTTACGATTCAAACTTATTTTACGTATACGGTACACCCGAGCGC
GAAACCGAAGTTGGACTATTTGGCTATGCCAGTGCCTATGAGCGCGATGAAGAGCAATTAAATGTAGATTTGTTTGTATC
TGGCGATTTTAGCCTGTTTGAAAGAAACCACCAGCTAGTACTTGGTTACAGCGATTCTGATACCAACCTTGCCGAAGCAT
CGCATTACAATAATACCGATGGCTTCCCGGTACTTGGCGCCGACTGGGCCAAAGGCAATACTCCAGCGATGGATTTTCCT
GATCACGACCCCGCCACAAGCTCCACCGATATAGACCTAAGCCAAAAAGCGTTTTATGTGGCTGCGCGTTTAAATGTACT
TGATAACCTAGCGTTATTATTGGGTGCAAGAAATACAGAGCTTGAGCAAACAGGCGTAAGCTACGGCGGCGAATCGAATG
CGAGTGCAAATAAAACTGTACCCTATTTCGGGGTTACCTATGCATTAATCGACAGTCTAATGTTGTACTCAAGTTACAGC
GAAGTATTTAAGCAACAAACTTGGGTGAACAGCGAGCTGCAACCGCTTGGTGCTACCGTGGGGGCATCCTCTGAATTAGG
GTTGAAAAAGTCGTTTAATGACGAGCGCTCAGTGCTAACACTTGCAGCATTTTCATCTGAACAAAGTGATTTTGGTGTAT
TTGTAGCTCGAAATGAAAGCGGCATTGCAATCTACCGAACTGCGGAGTTAAGCAGCTCTGGCTACGAGCTGGAATTTTCT
GGTGAGGTTACTGATGGCTTAAACATTGGCGCCGGCTTAACGGTATTGGATATTAAAGAAGACGACGAAGATGCGCGTCC
GTTCATTCCCACACAGCTTTTAAAATTCTCGGCTTCATATGTATTGCCTAGTCTGCCTGACTTAAAAATTGGTAGCTCGG
TTAAATGGCAGAATGAAACTACCACAAGCGATGGATCGTATACCCAAGATGCCTTTACCTTACTAGACATTGCTGCGCAC
TATCAAATTAACGCCCAGTTAAGTGTGTCGCTAAACCTAGAAAACCTAGGTAACGAGAAGTATTTAAACAGCCTGTATTG
GAGCCAAGCGTATTTCGGCGAGCCGCGCAACATGAGTGCCACAGTACGCTGGAAGCTATAA

Upstream 100 bases:

>100_bases
CCTTTATTGCTAATCTAAATGTTAAGCGTTATCATTCGCACACATTAAGAGCATTATTTCTAACTGCTCACTTTGGCCAT
TTTTGGAGTGTTTCCTTATT

Downstream 100 bases:

>100_bases
TCTAACCAGTACTTTATACCTAAAAAAGCCCGCCTCTGTTGCGGGCTTAATTCGTTTAGTGTGAGAGAATAATGCGAAAG
ACATTTTTTAAAGTTCACAG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>686_residues
MISRLSPLVAFICLTTTSVAFAEEGTSSKLEETFIYGEQGKTDTATKLELSIFETPQTVTAVSRAQLDEFALTSISDVLN
YAPGITVEEVETNRTYYTARGFDIVNFQYDGVGIPFISGLNLGQQDTAIYEKVEIVKGSAGLITGLANPSATINYVRKRP
TDDLQASAALSLGQWQNKRAEVDIATALSDSVRARAVVAYDNGETHLDRNKNTTQLGYGIFEFDLSDNTMLTAGYSYDRN
ESKGVLWGALPLLYTDGSRTNYDVSTSNAPDWTFANTTQKQSFAELEHHINQNWTAHLHLTHNQSTYDSNLFYVYGTPER
ETEVGLFGYASAYERDEEQLNVDLFVSGDFSLFERNHQLVLGYSDSDTNLAEASHYNNTDGFPVLGADWAKGNTPAMDFP
DHDPATSSTDIDLSQKAFYVAARLNVLDNLALLLGARNTELEQTGVSYGGESNASANKTVPYFGVTYALIDSLMLYSSYS
EVFKQQTWVNSELQPLGATVGASSELGLKKSFNDERSVLTLAAFSSEQSDFGVFVARNESGIAIYRTAELSSSGYELEFS
GEVTDGLNIGAGLTVLDIKEDDEDARPFIPTQLLKFSASYVLPSLPDLKIGSSVKWQNETTTSDGSYTQDAFTLLDIAAH
YQINAQLSVSLNLENLGNEKYLNSLYWSQAYFGEPRNMSATVRWKL

Sequences:
NA

Specific function: NA

COG id: COG4773

COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA