Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90022339

GI number:

Start: 3419376

End: 3421586

Strand: Direct

Name: Not Available

Synonym: Sde_2694

Alternate gene names: NA

Gene position: NA

Preceding gene: 90022337

Following gene: 90022341

Centisome position: NA

GC content: NA

Gene sequence:

>2211_bases
ATGAATAAGCTCTACCTAGAAATCGCCCTACCCGTTCCTTTGCGCCGCACATTTGACTACCTCACCAATTTTCAGGGTGA
CCCAAATGGGCTAATAGGCTGTCGCGTACAGGCGCCGTTTGGCAATCAAACCTTAATTGGCATAATCATTGGGGTGAAGG
CGCAGTCGGAAACTCCTGCCGACAAAATGAAAGACATTCACACCATTATTGATGACACACCACTTATATCTCACCTAGAT
TTGCAGCTATTTAGCTGGGCTGCCAATTACTACCACCACTCTCTAGGCGAGGTATTACACGCGTCCATCCCCCAAAAGTT
GCGCCAAGGCGAACGCCAAGAGCACGAACAACTCATAAGCGCGTGGAAACACACCCCCGAAGGGATGGGATTGCCAGAAA
CAGCATTAAACCGCTCTAAAAAGCAGCAAGAAATACACAGGTACCTGCTACAAAACACACAATTTACCCGCTCCACGGCA
CAAAGGCTTGGTTTTTCCACCTCTGCAATAAAAGCACTTAAAGACAAAAATCTTATCGAAGAAATTTTAGTTAAAGACTC
GATTGAACAAGTGCAAACAAATAATAGCTTGCTCAACAATACGCCACTCACCCTAAACCAAGAGCAAACAGCCGCACAAG
AAAGCGTTATTTTTCACCGCTTTGGGGCCTACCTGCTTGATGGTGTAACAGGCAGCGGCAAAACCGAAGTGTACCTACAA
CTGGTGGCCAGAGCCTTACAAGCAGGCACACAAGCACTTGTACTTATTCCTGAAATAGGCCTGTCTCCCCAAACAGTAGG
CCGATTTAAAGACAGGTTTAGCGTAGAAATAGCCGAACTCCATTCCTCCATTAACGAAGCCAAACGCGCCGAACATTGGC
AAGCAGCAAAAAGCGGCCGTGCAAAAATAGTGATAGGCACGCGCCTAGCTGCCTTAGCCGCACTTAACAAACCCGGCATT
ATCATTGTGGATGAAGAGCACGACCTCTCATATAAACAACACGACGGCTTTCGTTATTCGGCGCGAGACATATGCGTTTA
CCGAGCCAAACAGCACAACATTCCCGTGGTATTAGGCTCTGCAACCCCTTCACTAGAAACCCTAAACAACGCCATTACTG
GTCGCTACCAACATTTAAAACTCACCCAGCGAGCAAGCACAGCCACACCGCCTCATATCGAAAGTATCGACATTCGCAAC
CAGCAATTGACAGCAGGACTGTGTGAATCGGCAATAGAAGAAATTAGGCACACCCTACAACGCCAACAGCAGGCGCTGGT
ATTTCTTAATCGCAGAGGGTTTGCCCCGTCGCTCTTTTGTCATCACTGCGGCTGGCAAGCCAAATGTACGGGCTGCGAAC
TACCTATGACCTTTCACTCGCACCCAAGACACCTACACTGCCACCGCTGCGACAGGCAAAACGGCGTACCTCGCGCCTGC
CCAAGCTGCAAAAACCAAGCATTCAGCCATCGCGGTAGTGGTACCGAGCAAATCGAGCTCTTTTTGGCGAAGCAGTTTCC
AAATACTCCAGTAATACGTATAGATAGAGACACCACCAGCTCTAAGAAGGCGATGCAAAAGCTATTAGAGCCCGCTTACG
CAGGCACGCCTTGCATACTGGTTGGCACACAAATGCTAGCCAAGGGGCACCATATTCCCGGTATTAACCTCGCTGTTATT
GCCGATGCAGATCAAGGCCTTATGAGTGCCGATTATCGCGGTGTAGAACAAGTTGGCCAACTTGTTACTCAAGTGGCCGG
CAGGGCTGGGCGCGCATCGTCAACGGGTAAAGTACTTATCCAAACCCACCAACCAGACCACCCGTTAATGCGTGTGCTTA
TTGCGGAAGGCTACAATAGCTTTGCGGTGCAACTGCTAGCAGAACGCAAACATTCCGGCCTACCACCTTACGGATACTCT
GCTTTAATTCGCAGCGAGTCCAAGCGGCCCGAAAACGCGCTTGCCATATTACAACTGATACATGGCGCGATTAAAAATAC
TGGCAACAAACACACCATCACCACCATCGGCCCAATGGCAGCCCCTATAGAAAAAATAGGCAACAGGTTTAGGTTTCAAT
ACCAACTTTTCTGTAATTCAAGAAAGGAGCTTCACGCAACTTTAAAAGCCGTGCTAAGCGAGGTAGAAGTTAAAGCGGAG
GCGAGAAGAACGCGCTGGTCGGTGGATATTGATCCGGTGACCAGCGCTTAA

Upstream 100 bases:

>100_bases
GGCCTAAATTTAAGACCGCGCATGGTACCAGAAAGCGCACGCAAAGCAACACAAAATCGTCTACATATCGATCACTCTGC
AATAGGCCAACGCCAACTTA

Downstream 100 bases:

>100_bases
AGATCAATCTATTTCACAGCTTCTTACTGGATCTCCATCAGTATCTGGGTCCCCATTTTCAGGGTCCGGATCAAAATCAT
TTTCGGAAGCCACACCACTA

Product: transcription elongation factor GreA / replication restart DNA helicase PriA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>736_residues
MNKLYLEIALPVPLRRTFDYLTNFQGDPNGLIGCRVQAPFGNQTLIGIIIGVKAQSETPADKMKDIHTIIDDTPLISHLD
LQLFSWAANYYHHSLGEVLHASIPQKLRQGERQEHEQLISAWKHTPEGMGLPETALNRSKKQQEIHRYLLQNTQFTRSTA
QRLGFSTSAIKALKDKNLIEEILVKDSIEQVQTNNSLLNNTPLTLNQEQTAAQESVIFHRFGAYLLDGVTGSGKTEVYLQ
LVARALQAGTQALVLIPEIGLSPQTVGRFKDRFSVEIAELHSSINEAKRAEHWQAAKSGRAKIVIGTRLAALAALNKPGI
IIVDEEHDLSYKQHDGFRYSARDICVYRAKQHNIPVVLGSATPSLETLNNAITGRYQHLKLTQRASTATPPHIESIDIRN
QQLTAGLCESAIEEIRHTLQRQQQALVFLNRRGFAPSLFCHHCGWQAKCTGCELPMTFHSHPRHLHCHRCDRQNGVPRAC
PSCKNQAFSHRGSGTEQIELFLAKQFPNTPVIRIDRDTTSSKKAMQKLLEPAYAGTPCILVGTQMLAKGHHIPGINLAVI
ADADQGLMSADYRGVEQVGQLVTQVAGRAGRASSTGKVLIQTHQPDHPLMRVLIAEGYNSFAVQLLAERKHSGLPPYGYS
ALIRSESKRPENALAILQLIHGAIKNTGNKHTITTIGPMAAPIEKIGNRFRFQYQLFCNSRKELHATLKAVLSEVEVKAE
ARRTRWSVDIDPVTSA

Sequences:
NA

Specific function: NA

COG id: COG1198

COG function: function code L; Primosomal protein N' (replication factor Y) - superfamily II helicase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA