Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90021672

GI number:

Start: 2553958

End: 2555625

Strand: Direct

Name: Not Available

Synonym: Sde_2027

Alternate gene names: NA

Gene position: NA

Preceding gene: 90021671

Following gene: 90021673

Centisome position: NA

GC content: NA

Gene sequence:

>1668_bases
ATGTTAAACCGTAAAAGCTTTGCTCGTAAAATTAATACACTAGCATTTTCTCTTACTGTTGCTTTCGCAGCGCTTTTAGT
TGGTTGCAGCTCCGATAAAAGCACCAGCCAAGACCCAGAGCAAACTCTGCATATGGCCTTCGGCGCCGAGCCGCAAACGC
TCGACCCTCATATGGCCGCAGGCGTACCAGATCTAAGACTGCTAGCAGCTATAATAGAACCCCTAGCAGAGCTAGACCCA
CACACCTTCGAAGCGGTGCCAGCACTTGCTAAAAGCTGGGATATATCTGAAGACGGTTTGGTTTATACGTTTCACCTGCG
CGAAAATGCAAAATGGTCCGACGGTACACCTTTAACAGCGCAAGATTTTGTATTTAGCTGGCAGCGCATACTTTCACCGG
CTATTGGTGGTTATTACGTACAAGACTATTACAACATAGTCGGCGCCGAAGATTTTAATACAGGTAAAAGCGAAGATTTC
ACCAGTGTGGGCGTAAAAGCCATAAGCAACCACGCCCTGCAATTTACTTTGCTAAAACCAGACCCTCTGTTTGTCAAACG
CATGGCACATGAAACAGTAGGCCCGGTGCAACCGGCAACTATTTTAAAGTTTGGTAACATAGACGACGCCACCTCAAAGT
GGACCCAGCCCCCTAACTATGTTTCTAACGGCCCATTTGTTATGACCCGCTGGGAAATTAACAAAGTGATAGTGCTAGAG
AAAAACCCCCACTACTGGGATGCCGAAAACGTAAAACTAGAAAAAATTTACGCCTATCCCATTGAAGATATAGCCACAGA
AGAGCGCATGTTTCGTTCCGGTCAAATTCATGTAGCGTGGGGCGGCCACATACCTACCGAAAAAATTGAAACTTATCAAA
AAGAATCGCCAGAAAAAATCATCATTACTCCAATGTACGGCACTTATTTTTATATTTTTAATAATCAAGTCGCCCCATTT
GATAATGCCGATGTTCGCAGAGCTTTCACCTATGCGCTAGACCGTGAAATGCTAACCTCTAAAATTGCAAAAGGCGGTAA
GCAACCTGCTACCACGCTCAGTTTGCCTGTACCGCACTTCAACCCCGACTCGCCCATTGAGTATAACCCACAAAAAGCAG
CGGAATATCTTGCTAAAGCGGGTTACCCCAATGGTGAAGGCTTTCCGCAAATTGCGCTGCTGTATAACACCGACGAATTA
CATAAAAAAATAGCCGTTGCCGCGCAGCAAATGTGGAAAAAACACTTAAACGTAAACATAACGCTTGAAAACCAAGAGTG
GAAATTCTTTTTAGAAAACAGAAAGAATAAAACATTCACATTGGCGCGCGGTGGTTCTATTAGCACCTTTGCGGACCCAA
TTGATTTTCTGCAATCCTACATGACCGGTCACGGCATGAATGATTCAGACTATAGAAATTCAGATTTTGACGCGCTGGTT
AAAAAAGCACTTTACGAACTAGACCCGGTAAAACGCGGGGCTTATTTGGAAGAAGCAGAAGAGCTTTTGCTCAATGAGGC
TGCGATAGCGCCGGTATTAACCTATACGGAAGTTTTCTTGAAAGCGCCCGAGGTTAAAAACGCCATTTTCAGCGCAACTG
CAAGACCAAACTATAAGGATATTTATCTCGACTTTTCGACAGCAGCGCAACAACCACAAAGCGAGTAA

Upstream 100 bases:

>100_bases
AGAAATGGTTGAAGATTTCCTTGGGCGCCCATATAGCTTTGAAACCTTTGCTAAAGGCCTAAGCTCTGATAACGCTAAAG
CGCACTAAGGGGACAAAATA

Downstream 100 bases:

>100_bases
GTAGCCTAATGATTAAAAACATCTGTTTTGTATTGCTTGCAACTACACTAATGTTTGTTAGCGCATGCAGCAAAAATACA
TTAACCAATGTGGAAAAGGG

Product: periplasmic oligopeptide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>555_residues
MLNRKSFARKINTLAFSLTVAFAALLVGCSSDKSTSQDPEQTLHMAFGAEPQTLDPHMAAGVPDLRLLAAIIEPLAELDP
HTFEAVPALAKSWDISEDGLVYTFHLRENAKWSDGTPLTAQDFVFSWQRILSPAIGGYYVQDYYNIVGAEDFNTGKSEDF
TSVGVKAISNHALQFTLLKPDPLFVKRMAHETVGPVQPATILKFGNIDDATSKWTQPPNYVSNGPFVMTRWEINKVIVLE
KNPHYWDAENVKLEKIYAYPIEDIATEERMFRSGQIHVAWGGHIPTEKIETYQKESPEKIIITPMYGTYFYIFNNQVAPF
DNADVRRAFTYALDREMLTSKIAKGGKQPATTLSLPVPHFNPDSPIEYNPQKAAEYLAKAGYPNGEGFPQIALLYNTDEL
HKKIAVAAQQMWKKHLNVNITLENQEWKFFLENRKNKTFTLARGGSISTFADPIDFLQSYMTGHGMNDSDYRNSDFDALV
KKALYELDPVKRGAYLEEAEELLLNEAAIAPVLTYTEVFLKAPEVKNAIFSATARPNYKDIYLDFSTAAQQPQSE

Sequences:
NA

Specific function: NA

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA