Definition Saccharophagus degradans 2-40 chromosome, complete genome.
Accession NC_007912
Length 5,057,531

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Identifier: 90020599

GI number:

Start: 1234050

End: 1236770

Strand: Reverse

Name: Not Available

Synonym: Sde_0952

Alternate gene names: NA

Gene position: NA

Preceding gene: 90020600

Following gene: 90020598

Centisome position: NA

GC content: NA

Gene sequence:

>2721_bases
ATGAAGAAGTTCTACATAAAACCTTTAGTAGCAGCAATTGCGTTAACTGCAGCAGGCCAAGGCTATGCTCAGGAAGCAAG
TGCTGAAAACACATTAGAAGAAGTGGTTGTTACTGGCTTTAGAGGCAGTTTGCAAAGCTCTTTAAATACTAAGCGCGATT
CTGTTGGCGTAGTTGATGCAATATACGCTGAAGATATTGCGGACTTTCCAGATAACAACTTAGCAGAATCTTTACAGCGT
ATCCCTGGTGTTGCCATATCTCGCGCTGGCGGTGAAGGTCAACAAATTACAGTTCGCGGTCTTGGTCCTGACTATACTCG
CATTCGTATTAACGGCATGGAGTCTATGTCATCTACTGGCGGTACAGATGCCATTGGTGGTAATAACCGCGGCCGTGGTT
TCGACTTCAACACATTCTCTTCTGACCTTTTTAGCAACTTGATTGTAAGCAAAACCAACTCTGCTGAAATTGAAGAAGGT
TCACTAGGTGCGACAGTAGACCTTAAAACTGCTCGCCCAATGGAGCTTGACGATTTCGTTCTGTCTGTAGGTGGCAATCT
AAACTACAATGACAAGTCGGAAAAAGTAGACCCGAAAATTGCTGTAATGGTAAGCAAACAGTTTAGTGATACTTTTGGTG
CTTTGCTGTCTGTATCTTACGCTGACCGCAACATTACCGATGAAGGCAACTCTACCGTTCGCTGGGCTACCTACCCAGAC
GTAGGCTCATATCGCGGAATCACCGACCCAACTCTTTCTCCTGAACTTGCAAGATTAGAAGAAACTGAAGAAGACCGTCG
CTTGTTCCATCCACGTATTCCTCGCTACGATTCATACACACACGAAATTACGCGCACCGGTGTCGCTGCCACTTTCCAAT
GGCTACCTACAGATGCAACCGATATAGTCTTGGATGTGCTGTACTCTAAGCACGACGCCACGCGCAATGAGATCTTCATG
CAAGGTATCGGTAACTCAACAGCCGATTACGACGATTACAATTTCACTGATTACGAAATAGACGGTCAAACAATCGTATA
CGCAGCAATTTCTAACGCTAATGCTCAAGTTGAAAACCGCTTCGACGAATTAACCACCGAGTTCCAACAAGTCACCTTGT
CGGCTACTCACGAGTTTACCGACCGTTTACGCATGAACGTTTTGTTAGGTAACTCTTCATCCGAGTTCAGCAACCCGGTC
CAAACCACCATTATTGCCCGCGCCAATGGTGTAGGTATGACTTGGGATTACCGCGGTGATAGCGCTGATACCCTACTAAC
TTGGGGTGAAGACGCTTATGATGAATCAAGCTACACCTTATCCGGTATTCGTCAGCGCCCACAGGGTACTAACAACGAAT
TCACTAACCTGACGGCAGATCTAGAGTTTGACTTTAACGATTCCGTAACGCTGAAAGCAGGTGTTACCTCGAAGTCGTTC
AAATTCGACACTTATCAATCGCGTTACGCAACTAACGAAGGCGCGAAAGGCCTAACTATTGCTGGCAACATGTACGAATA
CGATTCAGGTTTAGGCGATGGCCGAGCTTGGCTAGTGCCAGACTTAGACAAATTTATCGATGCGGGCATTTTGTCCAACT
CGGGTGATTTTGCTTTGAGTCCACGCACCAATGATATCTATGCTGTCGAAGAAGACACCACCTCTCTGTTTACTCAAGTG
GACTTCAATACTCAATTAGGCGAAATGCCACTTTCAGGCAACTTTGGCTTCCGTTTTTTCAGCACCGACCAAGCCTCCAC
CGGTTGGTTTGAGAATAGCGAAGGCAACGACGTCCAAGAGTGGGTTGAGCATTCGTACGATGATATCTTGCCAGCCTTGA
ACCTACGCTTGGAGCCGATGGAAGATGTAGTATTCCGCTTTAGCGTTTCTGAAGGTATAACTCGCGGTGGCTTAAGCTCA
CTACGTGCAGACCAAGGTGTGAGCGTAAATGGTAGCTCTTACACCATCACCGGTGGCAACCCGTTCCTAGAGCCAACTAA
AGCGACAAGCTACGATGCCGGTATCGAATTGTATATAACCGATACTTCAGCAATGTCTATGACCGTGTTTAAGAAGGAAA
TTGGTAGCCATATACAACGTCTACGCGACCAGAAAACCCCAGCTGAGCTGGGCATTCCCGCTAGCGAAGTAGCTGCACAA
TGTGAGAACGCTGCTCAAAACCCAGAGTCTTGCAACGTGAACGCAGTATTCGACCGCTCAGTTCCATTGAATGGCCCAGG
CGGTGATCTACACGGCTTCGAATGGCAGCTGCAAGGTGACTTCGGCGCATTCGGCGATGCATGGGCCAATGTTGGTTATA
TTGCCAACTACACCTACGTAAAAACCGAACTAGCCTACTTAAATGAATTTGGTGCAGTAGACGTAGTTGCCAACCTGCAA
AACCTATCAGAAGTGACTAAATCCGCCACTCTTTACTACGAAAACGATGTATTTAGTGCACGTATCGCCCTAGTAGATCG
CAGCGATTACCTCACTGACCCGCGTGGCCGAGACTCAAACAATCAACACGGCACCTATGGTACCAGCAATGTTGACTTCT
CTTCGTCGTACCAATTTAACGACAACCTGAAGTTCAATTTCGACATTAGCAATTTAACCAACCAAGGTGATGACCAATGG
GTTGACCGTGAAGATTTGCGTTTGTCTTACTACCACGAGACTGGCACTCAGGTCTCATTAGGCGCGCAATACAAATTCTA
A

Upstream 100 bases:

>100_bases
GGCCTACCATAATGTGCGAGTATGCCGTTACACCAATAAATTAAATTGGTTCACTTATAAAAATGAACTCTGTCTTTGAA
CAAGAACGTGGGGAATAATA

Downstream 100 bases:

>100_bases
TTAAGACTTTGTATTAACTCTTCGAGTGGCGCCAGCTTGTTCTGGCGCCATTTTTGTATTGAAGCCATACTAATTCATAC
AAATTCTATTTAACGTGTGA

Product: 50S ribosomal protein L17

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>906_residues
MKKFYIKPLVAAIALTAAGQGYAQEASAENTLEEVVVTGFRGSLQSSLNTKRDSVGVVDAIYAEDIADFPDNNLAESLQR
IPGVAISRAGGEGQQITVRGLGPDYTRIRINGMESMSSTGGTDAIGGNNRGRGFDFNTFSSDLFSNLIVSKTNSAEIEEG
SLGATVDLKTARPMELDDFVLSVGGNLNYNDKSEKVDPKIAVMVSKQFSDTFGALLSVSYADRNITDEGNSTVRWATYPD
VGSYRGITDPTLSPELARLEETEEDRRLFHPRIPRYDSYTHEITRTGVAATFQWLPTDATDIVLDVLYSKHDATRNEIFM
QGIGNSTADYDDYNFTDYEIDGQTIVYAAISNANAQVENRFDELTTEFQQVTLSATHEFTDRLRMNVLLGNSSSEFSNPV
QTTIIARANGVGMTWDYRGDSADTLLTWGEDAYDESSYTLSGIRQRPQGTNNEFTNLTADLEFDFNDSVTLKAGVTSKSF
KFDTYQSRYATNEGAKGLTIAGNMYEYDSGLGDGRAWLVPDLDKFIDAGILSNSGDFALSPRTNDIYAVEEDTTSLFTQV
DFNTQLGEMPLSGNFGFRFFSTDQASTGWFENSEGNDVQEWVEHSYDDILPALNLRLEPMEDVVFRFSVSEGITRGGLSS
LRADQGVSVNGSSYTITGGNPFLEPTKATSYDAGIELYITDTSAMSMTVFKKEIGSHIQRLRDQKTPAELGIPASEVAAQ
CENAAQNPESCNVNAVFDRSVPLNGPGGDLHGFEWQLQGDFGAFGDAWANVGYIANYTYVKTELAYLNEFGAVDVVANLQ
NLSEVTKSATLYYENDVFSARIALVDRSDYLTDPRGRDSNNQHGTYGTSNVDFSSSYQFNDNLKFNFDISNLTNQGDDQW
VDREDLRLSYYHETGTQVSLGAQYKF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA