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The map label for this gene is 89885862

Identifier: 89885862

GI number: 89885862

Start: 141113

End: 141982

Strand: Reverse

Name: 89885862

Synonym: Rfer_4376

Alternate gene names: NA

Gene position: 141982-141113 (Counterclockwise)

Preceding gene: 89885863

Following gene: 89885861

Centisome position: 55.15

GC content: 56.32

Gene sequence:

>870_bases
ATGGACAAAACTTATCCCGACCCTCGCGCCTGGATTCAAGCGCATATCGCCAACCATTTGGGAAGCAATATCCGCCAATA
CACCTGGCGCACCTGGCTTGGACAGCCAAAAGTTAACTCACTCGGAGGACTGAGCTTTCTGCAAGCAGCAGAGGGCAAGG
TTGTCGAGATGGATGATGACCTCATCCTCGTAAAAACATCTGCCAAAGAGTTCTGCATCGTGGCAAAAGACCTACTCAAC
GCCCCGGTCGAAGTTGAGGCCAAGGTCAAGCTCACGTTTTACGATCTGCGCGATTTTGACGGTCTCAAAAGCGACGGCTC
GGACGATCCGTCCACCGGTGGCTGCAAATCCTTCATGCTCACCGGCGCCAAAACACTTCTCCCTGCCATCTGGGAAGAAC
GAGGCGAATGGTCAAACCGGGCCAAAGCGGTCACCGCCTCCTGGACCACGATTCAAAACCCCTACCTGCGCGACCTCATC
AAGCAGCTGGAAGGCACTTACGCCGACTCTTGCCGTGGCCGCAACCTGGTCAATGTGCTGGTCGACGCCAACGGCACCAC
GCCGATCTTCATCGACCCTTCGGAAGCTAAAAGCTGCAGCGAAGACAAGGAAAAGTGGCCAGCCATCATCACCACGGTGA
ATTCAGCCAAGTTTCGCGGTCGTGTGGCCATCCGCTACGACCGCGGCGCCGACACCTACGAGATCGAACTGACCCCAAAT
TTGGGTGAAGCCCGGCTCTTTGGCATGGTGCACTTCGATGACCTCCAGCCCATTCTTGTTGGGCAGATTGAGGACGACTC
CTGGCAGAGCGTCAACGTCGAAATCCTCAAAGCAGCCCCGAAGAAGAAACGGGTGCTCGAAGCCGCCTGA

Upstream 100 bases:

>100_bases
GGCATTTCAAACCGCCTGCACTTCACCCTGCAGCGCACCACTTCCAAACCTACGGGCCCAGACCCGATGGGGCCGGGCTC
CTTCTATCAATGGAGTTCTT

Downstream 100 bases:

>100_bases
TCCCAGACCGGCCTGATTCGCCTTCCCGCAGCACATCGGTGCTTGCGGGAAGCGCGATCTTCTTCATTCCCCTACCAGAC
GTTTTCCCCAAGCCCCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MDKTYPDPRAWIQAHIANHLGSNIRQYTWRTWLGQPKVNSLGGLSFLQAAEGKVVEMDDDLILVKTSAKEFCIVAKDLLN
APVEVEAKVKLTFYDLRDFDGLKSDGSDDPSTGGCKSFMLTGAKTLLPAIWEERGEWSNRAKAVTASWTTIQNPYLRDLI
KQLEGTYADSCRGRNLVNVLVDANGTTPIFIDPSEAKSCSEDKEKWPAIITTVNSAKFRGRVAIRYDRGADTYEIELTPN
LGEARLFGMVHFDDLQPILVGQIEDDSWQSVNVEILKAAPKKKRVLEAA

Sequences:

>Translated_289_residues
MDKTYPDPRAWIQAHIANHLGSNIRQYTWRTWLGQPKVNSLGGLSFLQAAEGKVVEMDDDLILVKTSAKEFCIVAKDLLN
APVEVEAKVKLTFYDLRDFDGLKSDGSDDPSTGGCKSFMLTGAKTLLPAIWEERGEWSNRAKAVTASWTTIQNPYLRDLI
KQLEGTYADSCRGRNLVNVLVDANGTTPIFIDPSEAKSCSEDKEKWPAIITTVNSAKFRGRVAIRYDRGADTYEIELTPN
LGEARLFGMVHFDDLQPILVGQIEDDSWQSVNVEILKAAPKKKRVLEAA
>Mature_289_residues
MDKTYPDPRAWIQAHIANHLGSNIRQYTWRTWLGQPKVNSLGGLSFLQAAEGKVVEMDDDLILVKTSAKEFCIVAKDLLN
APVEVEAKVKLTFYDLRDFDGLKSDGSDDPSTGGCKSFMLTGAKTLLPAIWEERGEWSNRAKAVTASWTTIQNPYLRDLI
KQLEGTYADSCRGRNLVNVLVDANGTTPIFIDPSEAKSCSEDKEKWPAIITTVNSAKFRGRVAIRYDRGADTYEIELTPN
LGEARLFGMVHFDDLQPILVGQIEDDSWQSVNVEILKAAPKKKRVLEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32209; Mature: 32209

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTYPDPRAWIQAHIANHLGSNIRQYTWRTWLGQPKVNSLGGLSFLQAAEGKVVEMDDD
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCC
LILVKTSAKEFCIVAKDLLNAPVEVEAKVKLTFYDLRDFDGLKSDGSDDPSTGGCKSFML
EEEEEECCCHHHEEEHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
TGAKTLLPAIWEERGEWSNRAKAVTASWTTIQNPYLRDLIKQLEGTYADSCRGRNLVNVL
HCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCEEEEE
VDANGTTPIFIDPSEAKSCSEDKEKWPAIITTVNSAKFRGRVAIRYDRGADTYEIELTPN
EECCCCEEEEECCHHHCCCCHHHHHCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCC
LGEARLFGMVHFDDLQPILVGQIEDDSWQSVNVEILKAAPKKKRVLEAA
CCCEEEEEEEEECCCCEEEEEEECCCCCCEECEEEEECCCCHHHHCCCC
>Mature Secondary Structure
MDKTYPDPRAWIQAHIANHLGSNIRQYTWRTWLGQPKVNSLGGLSFLQAAEGKVVEMDDD
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEEECCC
LILVKTSAKEFCIVAKDLLNAPVEVEAKVKLTFYDLRDFDGLKSDGSDDPSTGGCKSFML
EEEEEECCCHHHEEEHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
TGAKTLLPAIWEERGEWSNRAKAVTASWTTIQNPYLRDLIKQLEGTYADSCRGRNLVNVL
HCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCEEEEE
VDANGTTPIFIDPSEAKSCSEDKEKWPAIITTVNSAKFRGRVAIRYDRGADTYEIELTPN
EECCCCEEEEECCHHHCCCCHHHHHCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCC
LGEARLFGMVHFDDLQPILVGQIEDDSWQSVNVEILKAAPKKKRVLEAA
CCCEEEEEEEEECCCCEEEEEEECCCCCCEECEEEEECCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA