Click here to switch to the map view.

The map label for this gene is 89885850

Identifier: 89885850

GI number: 89885850

Start: 130390

End: 131094

Strand: Reverse

Name: 89885850

Synonym: Rfer_4364

Alternate gene names: NA

Gene position: 131094-130390 (Counterclockwise)

Preceding gene: 89885851

Following gene: 89885849

Centisome position: 50.92

GC content: 60.14

Gene sequence:

>705_bases
ATGTCAATTCAAAACCCTCCCATACCTTTGCGTGCGGGACTCGACCATCCGGCCTACAACACCCCAATGCGGGTGAGAGG
TTGGACGCGACGGCTCACGGCCAAGAACTCGCCAACGACCCTGCCGGCCAAGCAAATCATCAAAAGGCTGGCTCCGCACT
GGAGCCAGACTGATCACGCTTTGCTGGCCAAGTACCACACGGACCGGGCTGCAAAGCTCGATGCCATCTGGTGCCTGGTA
TCGGAACGCGCGGCGCTTCAGGCCTTGGGTCGCCCCTGGCAATTCACCGGCTACGAGATCTGCGGGATCGCTCGCGAAGA
GTTCGCCCCGCGCCACAAACGGGTCCTGCGCCACTGCGCTTACCGTGGCACAGAGCACAAGAAGCTGGCGCTGGCGCATG
CGGCAGCGGCAGGACGGGCAGCGATCTTGGCGCTGTCCACCATTAAAGAAAACAATGGAAACGAAAACAAAGACGATCCA
GGTCGTCCCCCAGTCCCGTTCGAGTTGGCCAACGCCATCACAGCCTTGAAACTGGCTGCAGAGTGCGGGGGCGAGCTCGA
TCGGCGGCAATACAAGACGGCGCACGAAAATTTGGAACGCTTGCGTGACCAAATCATCGACTATGACAACAGCCTCAATG
CGCGAGAAGTGGCCCCCACCGGGGATGACTACAACGCTTTGATGTCCCTGCTGGCGCTGCCATGA

Upstream 100 bases:

>100_bases
AGCTAGACCCATCCTGTTTGCCCCATTGCGCGGCAAATCCATCATCAACCCTTCGGGACTCATGCCCGAAGGGGCGTGAG
TCCCTTTTTTGGACTTTAAG

Downstream 100 bases:

>100_bases
CAAAACCGCAGGCTTTAGCCGCCTGAACAAAGCATTCACACCCACCCAATTGGCGCGTGAATGAAGATTACGTGAACCCC
TTGACCTGTCAGGTCAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSIQNPPIPLRAGLDHPAYNTPMRVRGWTRRLTAKNSPTTLPAKQIIKRLAPHWSQTDHALLAKYHTDRAAKLDAIWCLV
SERAALQALGRPWQFTGYEICGIAREEFAPRHKRVLRHCAYRGTEHKKLALAHAAAAGRAAILALSTIKENNGNENKDDP
GRPPVPFELANAITALKLAAECGGELDRRQYKTAHENLERLRDQIIDYDNSLNAREVAPTGDDYNALMSLLALP

Sequences:

>Translated_234_residues
MSIQNPPIPLRAGLDHPAYNTPMRVRGWTRRLTAKNSPTTLPAKQIIKRLAPHWSQTDHALLAKYHTDRAAKLDAIWCLV
SERAALQALGRPWQFTGYEICGIAREEFAPRHKRVLRHCAYRGTEHKKLALAHAAAAGRAAILALSTIKENNGNENKDDP
GRPPVPFELANAITALKLAAECGGELDRRQYKTAHENLERLRDQIIDYDNSLNAREVAPTGDDYNALMSLLALP
>Mature_233_residues
SIQNPPIPLRAGLDHPAYNTPMRVRGWTRRLTAKNSPTTLPAKQIIKRLAPHWSQTDHALLAKYHTDRAAKLDAIWCLVS
ERAALQALGRPWQFTGYEICGIAREEFAPRHKRVLRHCAYRGTEHKKLALAHAAAAGRAAILALSTIKENNGNENKDDPG
RPPVPFELANAITALKLAAECGGELDRRQYKTAHENLERLRDQIIDYDNSLNAREVAPTGDDYNALMSLLALP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26090; Mature: 25959

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQNPPIPLRAGLDHPAYNTPMRVRGWTRRLTAKNSPTTLPAKQIIKRLAPHWSQTDHA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHH
LLAKYHTDRAAKLDAIWCLVSERAALQALGRPWQFTGYEICGIAREEFAPRHKRVLRHCA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHCHHHHHHHHHHH
YRGTEHKKLALAHAAAAGRAAILALSTIKENNGNENKDDPGRPPVPFELANAITALKLAA
HCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ECGGELDRRQYKTAHENLERLRDQIIDYDNSLNAREVAPTGDDYNALMSLLALP
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SIQNPPIPLRAGLDHPAYNTPMRVRGWTRRLTAKNSPTTLPAKQIIKRLAPHWSQTDHA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHH
LLAKYHTDRAAKLDAIWCLVSERAALQALGRPWQFTGYEICGIAREEFAPRHKRVLRHCA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHCHHHHHHHHHHH
YRGTEHKKLALAHAAAAGRAAILALSTIKENNGNENKDDPGRPPVPFELANAITALKLAA
HCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ECGGELDRRQYKTAHENLERLRDQIIDYDNSLNAREVAPTGDDYNALMSLLALP
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA